RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 SLC4A10Q6U841 1118 aa28.69■■■□□ 2.18
SSBP4-203ENST00000593641 FAM9BQ8IZU0 186 aa28.69■■■□□ 2.18
SSBP4-203ENST00000593641 CERS5Q8N5B7 392 aa28.69■■■□□ 2.18
SSBP4-203ENST00000593641 PDE4DIPQ5VU43 2346 aa28.68■■■□□ 2.18
SSBP4-203ENST00000593641 MYO1BO43795 1136 aa28.68■■■□□ 2.18
SSBP4-203ENST00000593641 SREBF2Q12772 1141 aa28.68■■■□□ 2.18
SSBP4-203ENST00000593641 EPHA10Q5JZY3 1008 aa28.68■■■□□ 2.18
SSBP4-203ENST00000593641 MTMR14Q8NCE2 650 aa28.68■■■□□ 2.18
SSBP4-203ENST00000593641 ZNF594Q96JF6 807 aaPredicted RBP28.68■■■□□ 2.18
SSBP4-203ENST00000593641 F8W031 263 aaPredicted RBP28.67■■■□□ 2.18
SSBP4-203ENST00000593641 PLIN1O60240 522 aa28.67■■■□□ 2.18
SSBP4-203ENST00000593641 ALDH1L1O75891 902 aa28.67■■■□□ 2.18
SSBP4-203ENST00000593641 FKBP1AP62942 108 aaKnown RBP28.67■■■□□ 2.18
SSBP4-203ENST00000593641 PTPN12Q05209 780 aaKnown RBP28.67■■■□□ 2.18
SSBP4-203ENST00000593641 SRCIN1Q9C0H9 1055 aa28.67■■■□□ 2.18
SSBP4-203ENST00000593641 DEFB129Q9H1M3 183 aa28.67■■■□□ 2.18
SSBP4-203ENST00000593641 ANGEL1Q9UNK9 670 aaKnown RBP28.67■■■□□ 2.18
SSBP4-203ENST00000593641 TM4SF4P48230 202 aa28.66■■■□□ 2.18
SSBP4-203ENST00000593641 TBC1D8O95759 1140 aa28.65■■■□□ 2.18
SSBP4-203ENST00000593641 PPP2R3BQ9Y5P8 575 aa28.65■■■□□ 2.18
SSBP4-203ENST00000593641 CFAP100Q494V2 611 aa28.64■■■□□ 2.18
SSBP4-203ENST00000593641 JAG2Q9Y219 1238 aa28.64■■■□□ 2.18
SSBP4-203ENST00000593641 ZNF296Q8WUU4 475 aaPredicted RBP28.63■■■□□ 2.17
SSBP4-203ENST00000593641 SPDYE2BA6NHP3 402 aa28.62■■■□□ 2.17
SSBP4-203ENST00000593641 PPP1R12BO60237 982 aaPredicted RBP28.62■■■□□ 2.17
SSBP4-203ENST00000593641 SPDYE6P0CI01 402 aa28.62■■■□□ 2.17
SSBP4-203ENST00000593641 LDLRAD1Q5T700 205 aa28.62■■■□□ 2.17
SSBP4-203ENST00000593641 CLRN2A0PK11 232 aa28.61■■■□□ 2.17
SSBP4-203ENST00000593641 RBM5P52756 815 aaKnown RBP eCLIP28.61■■■□□ 2.171e-11■■■□□ 16.2
SSBP4-203ENST00000593641 PKN2Q16513 984 aaKnown RBP28.61■■■□□ 2.17
SSBP4-203ENST00000593641 VEZTQ9HBM0 779 aa28.61■■■□□ 2.17
SSBP4-203ENST00000593641 PCDHAC2Q9Y5I4 1007 aa28.61■■■□□ 2.17
SSBP4-203ENST00000593641 SOX10P56693 466 aa28.6■■■□□ 2.17
SSBP4-203ENST00000593641 UBE4AQ14139 1066 aa28.6■■■□□ 2.17
SSBP4-203ENST00000593641 SUPT20HL1Q3ZLR7 823 aa28.6■■■□□ 2.17
SSBP4-203ENST00000593641 NOM1Q5C9Z4 860 aaKnown RBP28.6■■■□□ 2.17
SSBP4-203ENST00000593641 SPRYD7Q5W111 196 aa28.6■■■□□ 2.17
SSBP4-203ENST00000593641 FZD1Q9UP38 647 aa28.6■■■□□ 2.17
SSBP4-203ENST00000593641 ARAP2Q8WZ64 1704 aa28.6■■■□□ 2.17
SSBP4-203ENST00000593641 GPR25O00155 361 aa28.59■■■□□ 2.17
SSBP4-203ENST00000593641 MAP3K11Q16584 847 aa28.59■■■□□ 2.17
SSBP4-203ENST00000593641 SLC10A4Q96EP9 437 aa28.59■■■□□ 2.17
SSBP4-203ENST00000593641 SUCLG2Q96I99 432 aa28.59■■■□□ 2.17
SSBP4-203ENST00000593641 PRMT6Q96LA8 375 aaPredicted RBP28.59■■■□□ 2.17
SSBP4-203ENST00000593641 SSC5DA1L4H1 1573 aa28.58■■■□□ 2.17
SSBP4-203ENST00000593641 FAM205AQ6ZU69 1335 aa28.58■■■□□ 2.17
SSBP4-203ENST00000593641 ALDH1A1P00352 501 aa28.57■■■□□ 2.16
SSBP4-203ENST00000593641 HIBADHP31937 336 aaKnown RBP28.57■■■□□ 2.16
SSBP4-203ENST00000593641 MFSD14BQ5SR56 506 aa28.57■■■□□ 2.16
SSBP4-203ENST00000593641 CFHR5Q9BXR6 569 aa28.57■■■□□ 2.16
SSBP4-203ENST00000593641 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.57■■■□□ 2.16
SSBP4-203ENST00000593641 HPS5Q9UPZ3 1129 aa28.57■■■□□ 2.16
SSBP4-203ENST00000593641 MANSC4A6NHS7 340 aaPredicted RBP28.56■■■□□ 2.16
SSBP4-203ENST00000593641 LAMB1P07942 1786 aa28.56■■■□□ 2.16
SSBP4-203ENST00000593641 GYG1P46976 350 aa28.56■■■□□ 2.16
SSBP4-203ENST00000593641 TDRD7Q8NHU6 1098 aaKnown RBP28.56■■■□□ 2.16
SSBP4-203ENST00000593641 TNRC18O15417 2968 aaPredicted RBP28.56■■■□□ 2.16
SSBP4-203ENST00000593641 MROH5Q6ZUA9 1318 aa28.55■■■□□ 2.16
SSBP4-203ENST00000593641 UNCXA6NJT0 531 aa28.55■■■□□ 2.16
SSBP4-203ENST00000593641 NBPF7P0C2Y1 421 aaPredicted RBP28.55■■■□□ 2.16
SSBP4-203ENST00000593641 ZBTB48P10074 688 aaPredicted RBP28.55■■■□□ 2.16
SSBP4-203ENST00000593641 INHBEP58166 350 aa28.55■■■□□ 2.16
SSBP4-203ENST00000593641 TNFAIP1Q13829 316 aa28.55■■■□□ 2.16
SSBP4-203ENST00000593641 KAZALD1Q96I82 304 aa28.55■■■□□ 2.16
SSBP4-203ENST00000593641 PUS3Q9BZE2 481 aaKnown RBP28.55■■■□□ 2.16
SSBP4-203ENST00000593641 TTF2Q9UNY4 1162 aaKnown RBP28.55■■■□□ 2.16
SSBP4-203ENST00000593641 UTYO14607 1347 aa28.54■■■□□ 2.16
SSBP4-203ENST00000593641 FKTNO75072 461 aa28.54■■■□□ 2.16
SSBP4-203ENST00000593641 IREB2P48200 963 aaKnown RBP28.54■■■□□ 2.16
SSBP4-203ENST00000593641 AOX1Q06278 1338 aa28.53■■■□□ 2.16
SSBP4-203ENST00000593641 ZNF521Q96K83 1311 aa28.53■■■□□ 2.16
SSBP4-203ENST00000593641 RASA3Q14644 834 aa28.53■■■□□ 2.16
SSBP4-203ENST00000593641 NBPF12Q5TAG4 269 aaPredicted RBP28.53■■■□□ 2.16
SSBP4-203ENST00000593641 VPS37DQ86XT2 251 aa28.53■■■□□ 2.16
SSBP4-203ENST00000593641 WNK4Q96J92 1243 aa28.53■■■□□ 2.16
SSBP4-203ENST00000593641 CLMNQ96JQ2 1002 aa28.53■■■□□ 2.16
SSBP4-203ENST00000593641 FAM84BQ96KN1 310 aaPredicted RBP28.53■■■□□ 2.16
SSBP4-203ENST00000593641 BICC1Q9H694 974 aaKnown RBP28.53■■■□□ 2.16
SSBP4-203ENST00000593641 SERPINA10Q9UK55 444 aa28.53■■■□□ 2.16
SSBP4-203ENST00000593641 RIPOR2Q9Y4F9 1068 aa28.52■■■□□ 2.16
SSBP4-203ENST00000593641 SPDYE2Q495Y8 402 aa28.51■■■□□ 2.15
SSBP4-203ENST00000593641 PTPRCP08575 1304 aa28.5■■■□□ 2.15
SSBP4-203ENST00000593641 OTOFQ9HC10 1997 aa28.5■■■□□ 2.15
SSBP4-203ENST00000593641 RABL6Q3YEC7 729 aaPredicted RBP28.5■■■□□ 2.15
SSBP4-203ENST00000593641 METTL24Q5JXM2 366 aa28.5■■■□□ 2.15
SSBP4-203ENST00000593641 FBXO46Q6PJ61 603 aaPredicted RBP28.5■■■□□ 2.15
SSBP4-203ENST00000593641 IFNL1Q8IU54 200 aa28.5■■■□□ 2.15
SSBP4-203ENST00000593641 MRPL50Q8N5N7 158 aaKnown RBP28.5■■■□□ 2.15
SSBP4-203ENST00000593641 ANKRD13AQ8IZ07 590 aa28.49■■■□□ 2.15
SSBP4-203ENST00000593641 R3HDMLQ9H3Y0 253 aa28.49■■■□□ 2.15
SSBP4-203ENST00000593641 ZNF70Q9UC06 446 aaPredicted RBP28.49■■■□□ 2.15
SSBP4-203ENST00000593641 FRAT2O75474 233 aaPredicted RBP28.48■■■□□ 2.15
SSBP4-203ENST00000593641 CAVIN4Q5BKX8 364 aa28.48■■■□□ 2.15
SSBP4-203ENST00000593641 TDRD3Q9H7E2 651 aaKnown RBP28.48■■■□□ 2.15
SSBP4-203ENST00000593641 USP2O75604 605 aaPredicted RBP28.47■■■□□ 2.15
SSBP4-203ENST00000593641 CRKP46108 304 aa28.47■■■□□ 2.15
SSBP4-203ENST00000593641 OTUD7BQ6GQQ9 843 aa28.47■■■□□ 2.15
SSBP4-203ENST00000593641 DZIP1LQ8IYY4 767 aaKnown RBP28.47■■■□□ 2.15
SSBP4-203ENST00000593641 E9PSI1 815 aa28.46■■■□□ 2.15
SSBP4-203ENST00000593641 TNNI2P48788 182 aa28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 868.9 ms