RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 MMP14P50281 582 aa17.38■□□□□ 0.37
APOC1-208ENST00000592535 IFFO2Q5TF58 517 aa17.38■□□□□ 0.37
APOC1-208ENST00000592535 C2orf69Q8N8R5 385 aa17.38■□□□□ 0.37
APOC1-208ENST00000592535 TDRD7Q8NHU6 1098 aaKnown RBP17.38■□□□□ 0.37
APOC1-208ENST00000592535 AIDAQ96BJ3 306 aa17.38■□□□□ 0.37
APOC1-208ENST00000592535 MEIS3Q99687 375 aa17.38■□□□□ 0.37
APOC1-208ENST00000592535 TNNQ9UQP3 1299 aa17.38■□□□□ 0.37
APOC1-208ENST00000592535 LRRFIP2Q9Y608 721 aaKnown RBP17.38■□□□□ 0.37
APOC1-208ENST00000592535 F8W031 263 aaPredicted RBP17.37■□□□□ 0.37
APOC1-208ENST00000592535 PDE8BO95263 885 aa17.37■□□□□ 0.37
APOC1-208ENST00000592535 FKBP1AP62942 108 aaKnown RBP17.37■□□□□ 0.37
APOC1-208ENST00000592535 MAP2K1Q02750 393 aaPredicted RBP17.37■□□□□ 0.37
APOC1-208ENST00000592535 PTPN12Q05209 780 aaKnown RBP17.37■□□□□ 0.37
APOC1-208ENST00000592535 INTS3Q68E01 1043 aaKnown RBP17.37■□□□□ 0.37
APOC1-208ENST00000592535 ZBED3Q96IU2 234 aaPredicted RBP17.37■□□□□ 0.37
APOC1-208ENST00000592535 FAM205AQ6ZU69 1335 aa17.37■□□□□ 0.37
APOC1-208ENST00000592535 PAPPA2Q9BXP8 1791 aa17.36■□□□□ 0.37
APOC1-208ENST00000592535 EYA2O00167 538 aa17.36■□□□□ 0.37
APOC1-208ENST00000592535 TRIM27P14373 513 aa17.36■□□□□ 0.37
APOC1-208ENST00000592535 PRAMEF18Q5VWM3 479 aa17.36■□□□□ 0.37
APOC1-208ENST00000592535 FRAT1Q92837 279 aaPredicted RBP17.36■□□□□ 0.37
APOC1-208ENST00000592535 PCDHAC2Q9Y5I4 1007 aa17.36■□□□□ 0.37
APOC1-208ENST00000592535 MYH13Q9UKX3 1938 aa17.36■□□□□ 0.37
APOC1-208ENST00000592535 IPO8O15397 1037 aaKnown RBP17.35■□□□□ 0.37
APOC1-208ENST00000592535 MAP2K2P36507 400 aa17.35■□□□□ 0.37
APOC1-208ENST00000592535 CTCFP49711 727 aaPredicted RBP17.35■□□□□ 0.37
APOC1-208ENST00000592535 FBXO33Q7Z6M2 555 aa17.35■□□□□ 0.37
APOC1-208ENST00000592535 IQSEC3Q9UPP2 1182 aaPredicted RBP17.35■□□□□ 0.37
APOC1-208ENST00000592535 FGFR2P21802 821 aa17.34■□□□□ 0.37
APOC1-208ENST00000592535 DLGAP5Q15398 846 aa17.34■□□□□ 0.37
APOC1-208ENST00000592535 MFSD14BQ5SR56 506 aa17.34■□□□□ 0.37
APOC1-208ENST00000592535 RGMBQ6NW40 437 aa17.34■□□□□ 0.37
APOC1-208ENST00000592535 ATF7IPQ6VMQ6 1270 aa17.34■□□□□ 0.37
APOC1-208ENST00000592535 ATG9AQ7Z3C6 839 aa17.34■□□□□ 0.37
APOC1-208ENST00000592535 VPS37DQ86XT2 251 aa17.34■□□□□ 0.37
APOC1-208ENST00000592535 SIL1Q9H173 461 aa17.34■□□□□ 0.37
APOC1-208ENST00000592535 HDAC5Q9UQL6 1122 aa17.34■□□□□ 0.37
APOC1-208ENST00000592535 PUM3Q15397 648 aaKnown RBP17.33■□□□□ 0.36
APOC1-208ENST00000592535 CFAP100Q494V2 611 aa17.33■□□□□ 0.36
APOC1-208ENST00000592535 CAVIN4Q5BKX8 364 aa17.33■□□□□ 0.36
APOC1-208ENST00000592535 APOBEC3FQ8IUX4 373 aaKnown RBP17.33■□□□□ 0.36
APOC1-208ENST00000592535 MTMR14Q8NCE2 650 aa17.33■□□□□ 0.36
APOC1-208ENST00000592535 CLUAP1Q96AJ1 413 aa17.33■□□□□ 0.36
APOC1-208ENST00000592535 ZIC5Q96T25 663 aa17.33■□□□□ 0.36
APOC1-208ENST00000592535 AOX1Q06278 1338 aa17.32■□□□□ 0.36
APOC1-208ENST00000592535 ZBED9Q6R2W3 1325 aa17.32■□□□□ 0.36
APOC1-208ENST00000592535 FAM155AB1AL88 458 aaPredicted RBP17.32■□□□□ 0.36
APOC1-208ENST00000592535 GNAI3P08754 354 aa17.32■□□□□ 0.36
APOC1-208ENST00000592535 HSPA8P11142 646 aaKnown RBP17.32■□□□□ 0.36
APOC1-208ENST00000592535 BCAMP50895 628 aa17.32■□□□□ 0.36
APOC1-208ENST00000592535 LBX1P52954 281 aa17.32■□□□□ 0.36
APOC1-208ENST00000592535 MOB2Q70IA6 237 aa17.32■□□□□ 0.36
APOC1-208ENST00000592535 PA2G4Q9UQ80 394 aaKnown RBP17.32■□□□□ 0.36
APOC1-208ENST00000592535 SPDYE2BA6NHP3 402 aa17.31■□□□□ 0.36
APOC1-208ENST00000592535 CIAO1O76071 339 aa17.31■□□□□ 0.36
APOC1-208ENST00000592535 IFIT1P09914 478 aaKnown RBP17.31■□□□□ 0.36
APOC1-208ENST00000592535 SPDYE6P0CI01 402 aa17.31■□□□□ 0.36
APOC1-208ENST00000592535 ZNF157P51786 506 aaPredicted RBP17.31■□□□□ 0.36
APOC1-208ENST00000592535 FKBP1BP68106 108 aa17.31■□□□□ 0.36
APOC1-208ENST00000592535 CHAF1AQ13111 956 aaPredicted RBP17.31■□□□□ 0.36
APOC1-208ENST00000592535 NOGQ13253 232 aa17.31■□□□□ 0.36
APOC1-208ENST00000592535 TNS4Q8IZW8 715 aa17.31■□□□□ 0.36
APOC1-208ENST00000592535 PRMT6Q96LA8 375 aaPredicted RBP17.31■□□□□ 0.36
APOC1-208ENST00000592535 BEGAINQ9BUH8 593 aa17.31■□□□□ 0.36
APOC1-208ENST00000592535 PRDM10Q9NQV6 1147 aa17.31■□□□□ 0.36
APOC1-208ENST00000592535 FBXO3Q9UK99 471 aa17.31■□□□□ 0.36
APOC1-208ENST00000592535 TTF2Q9UNY4 1162 aaKnown RBP17.31■□□□□ 0.36
APOC1-208ENST00000592535 CLRN2A0PK11 232 aa17.3■□□□□ 0.36
APOC1-208ENST00000592535 FRAT2O75474 233 aaPredicted RBP17.3■□□□□ 0.36
APOC1-208ENST00000592535 SLC5A1P13866 664 aa17.3■□□□□ 0.36
APOC1-208ENST00000592535 RBM5P52756 815 aaKnown RBP eCLIP17.3■□□□□ 0.36
APOC1-208ENST00000592535 GRIK5Q16478 980 aa17.3■□□□□ 0.36
APOC1-208ENST00000592535 ZKSCAN2Q63HK3 967 aa17.3■□□□□ 0.36
APOC1-208ENST00000592535 LPIN2Q92539 896 aa17.3■□□□□ 0.36
APOC1-208ENST00000592535 CCDC102AQ96A19 550 aa17.3■□□□□ 0.36
APOC1-208ENST00000592535 COL1A1P02452 1464 aaPredicted RBP17.3■□□□□ 0.36
APOC1-208ENST00000592535 SLC10A3P09131 477 aa17.29■□□□□ 0.36
APOC1-208ENST00000592535 TMEM57Q8N5G2 664 aa17.29■□□□□ 0.36
APOC1-208ENST00000592535 COPRSQ9NQ92 184 aa17.29■□□□□ 0.36
APOC1-208ENST00000592535 CEP126Q9P2H0 1117 aa17.29■□□□□ 0.36
APOC1-208ENST00000592535 UBE2Q2LH0YL09 131 aa17.28■□□□□ 0.36
APOC1-208ENST00000592535 MYO1BO43795 1136 aa17.28■□□□□ 0.36
APOC1-208ENST00000592535 NF2P35240 595 aa17.28■□□□□ 0.36
APOC1-208ENST00000592535 IL15P40933 162 aaPredicted RBP17.28■□□□□ 0.36
APOC1-208ENST00000592535 TTLL12Q14166 644 aaPredicted RBP17.28■□□□□ 0.36
APOC1-208ENST00000592535 ATP2B3Q16720 1220 aa17.28■□□□□ 0.36
APOC1-208ENST00000592535 DEFB129Q9H1M3 183 aa17.28■□□□□ 0.36
APOC1-208ENST00000592535 TSKSQ9UJT2 592 aa17.28■□□□□ 0.36
APOC1-208ENST00000592535 SERPINA10Q9UK55 444 aa17.28■□□□□ 0.36
APOC1-208ENST00000592535 AKAP11Q9UKA4 1901 aa17.27■□□□□ 0.36
APOC1-208ENST00000592535 SRGAP3O43295 1099 aa17.27■□□□□ 0.36
APOC1-208ENST00000592535 KIF23Q02241 960 aaPredicted RBP17.27■□□□□ 0.36
APOC1-208ENST00000592535 MTX1Q13505 466 aa17.27■□□□□ 0.36
APOC1-208ENST00000592535 RASAL3Q86YV0 1011 aa17.27■□□□□ 0.36
APOC1-208ENST00000592535 TBC1D22AQ8WUA7 517 aa17.27■□□□□ 0.36
APOC1-208ENST00000592535 VEZTQ9HBM0 779 aa17.27■□□□□ 0.36
APOC1-208ENST00000592535 GNAI2P04899 355 aa17.26■□□□□ 0.35
APOC1-208ENST00000592535 CRKP46108 304 aa17.26■□□□□ 0.35
APOC1-208ENST00000592535 PRKG1Q13976 671 aa17.26■□□□□ 0.35
APOC1-208ENST00000592535 TDRD3Q9H7E2 651 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms