RNA–Protein interactions for RNA: ENST00000592435.1

PRKCSH-215, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 358 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-215ENST00000592435 CERS5Q8N5B7 392 aa12.16□□□□□ -0.46
PRKCSH-215ENST00000592435 MTMR14Q8NCE2 650 aa12.16□□□□□ -0.46
PRKCSH-215ENST00000592435 CCDC102AQ96A19 550 aa12.16□□□□□ -0.46
PRKCSH-215ENST00000592435 ZBED3Q96IU2 234 aaPredicted RBP12.16□□□□□ -0.46
PRKCSH-215ENST00000592435 KIF16BQ96L93 1317 aa12.15□□□□□ -0.46
PRKCSH-215ENST00000592435 IPO8O15397 1037 aaKnown RBP12.15□□□□□ -0.46
PRKCSH-215ENST00000592435 CA12O43570 354 aa12.15□□□□□ -0.46
PRKCSH-215ENST00000592435 UBTFL1P0CB47 393 aaPredicted RBP12.15□□□□□ -0.46
PRKCSH-215ENST00000592435 GYG1P46976 350 aa12.15□□□□□ -0.46
PRKCSH-215ENST00000592435 LBX1P52954 281 aa12.15□□□□□ -0.46
PRKCSH-215ENST00000592435 DLGAP5Q15398 846 aa12.15□□□□□ -0.46
PRKCSH-215ENST00000592435 METTL24Q5JXM2 366 aa12.15□□□□□ -0.46
PRKCSH-215ENST00000592435 FBXO33Q7Z6M2 555 aa12.15□□□□□ -0.46
PRKCSH-215ENST00000592435 VGLL2Q8N8G2 317 aa12.15□□□□□ -0.46
PRKCSH-215ENST00000592435 FAM155AB1AL88 458 aaPredicted RBP12.14□□□□□ -0.47
PRKCSH-215ENST00000592435 HSPA8P11142 646 aaKnown RBP12.14□□□□□ -0.47
PRKCSH-215ENST00000592435 RFX5P48382 616 aaPredicted RBP12.14□□□□□ -0.47
PRKCSH-215ENST00000592435 ZNF157P51786 506 aaPredicted RBP12.14□□□□□ -0.47
PRKCSH-215ENST00000592435 PTPN12Q05209 780 aaKnown RBP12.14□□□□□ -0.47
PRKCSH-215ENST00000592435 CAVIN4Q5BKX8 364 aa12.14□□□□□ -0.47
PRKCSH-215ENST00000592435 INTS3Q68E01 1043 aaKnown RBP12.14□□□□□ -0.47
PRKCSH-215ENST00000592435 APOBEC3FQ8IUX4 373 aaKnown RBP12.14□□□□□ -0.47
PRKCSH-215ENST00000592435 KLHDC4Q8TBB5 520 aa12.14□□□□□ -0.47
PRKCSH-215ENST00000592435 FBXO3Q9UK99 471 aa12.14□□□□□ -0.47
PRKCSH-215ENST00000592435 THSD7BQ9C0I4 1608 aa12.13□□□□□ -0.47
PRKCSH-215ENST00000592435 EYA2O00167 538 aa12.13□□□□□ -0.47
PRKCSH-215ENST00000592435 NF2P35240 595 aa12.13□□□□□ -0.47
PRKCSH-215ENST00000592435 VPS37DQ86XT2 251 aa12.13□□□□□ -0.47
PRKCSH-215ENST00000592435 SCAF8Q9UPN6 1271 aaKnown RBP12.13□□□□□ -0.47
PRKCSH-215ENST00000592435 ZNF646O15015 1829 aaPredicted RBP12.13□□□□□ -0.47
PRKCSH-215ENST00000592435 POLR2AP24928 1970 aaKnown RBP12.12□□□□□ -0.47
PRKCSH-215ENST00000592435 SPDYE2BA6NHP3 402 aa12.12□□□□□ -0.47
PRKCSH-215ENST00000592435 F8W031 263 aaPredicted RBP12.12□□□□□ -0.47
PRKCSH-215ENST00000592435 MYO1BO43795 1136 aa12.12□□□□□ -0.47
PRKCSH-215ENST00000592435 IFIT1P09914 478 aaKnown RBP12.12□□□□□ -0.47
PRKCSH-215ENST00000592435 SPDYE6P0CI01 402 aa12.12□□□□□ -0.47
PRKCSH-215ENST00000592435 FGFR2P21802 821 aa12.12□□□□□ -0.47
PRKCSH-215ENST00000592435 HNRNPUQ00839 825 aaKnown RBP eCLIP12.12□□□□□ -0.47
PRKCSH-215ENST00000592435 PUM3Q15397 648 aaKnown RBP12.12□□□□□ -0.47
PRKCSH-215ENST00000592435 CFAP100Q494V2 611 aa12.12□□□□□ -0.47
PRKCSH-215ENST00000592435 MFSD14BQ5SR56 506 aa12.12□□□□□ -0.47
PRKCSH-215ENST00000592435 PRAMEF18Q5VWM3 479 aa12.12□□□□□ -0.47
PRKCSH-215ENST00000592435 PRMT6Q96LA8 375 aaPredicted RBP12.12□□□□□ -0.47
PRKCSH-215ENST00000592435 CIAO1O76071 339 aa12.11□□□□□ -0.47
PRKCSH-215ENST00000592435 GNAI3P08754 354 aa12.11□□□□□ -0.47
PRKCSH-215ENST00000592435 SLC10A3P09131 477 aa12.11□□□□□ -0.47
PRKCSH-215ENST00000592435 ATG9AQ7Z3C6 839 aa12.11□□□□□ -0.47
PRKCSH-215ENST00000592435 REM2Q8IYK8 340 aaPredicted RBP12.11□□□□□ -0.47
PRKCSH-215ENST00000592435 TBC1D22AQ8WUA7 517 aa12.11□□□□□ -0.47
PRKCSH-215ENST00000592435 ZIC5Q96T25 663 aa12.11□□□□□ -0.47
PRKCSH-215ENST00000592435 MEIS3Q99687 375 aa12.11□□□□□ -0.47
PRKCSH-215ENST00000592435 DEFB129Q9H1M3 183 aa12.11□□□□□ -0.47
PRKCSH-215ENST00000592435 SERPINA10Q9UK55 444 aa12.11□□□□□ -0.47
PRKCSH-215ENST00000592435 JAG2Q9Y219 1238 aa12.11□□□□□ -0.47
PRKCSH-215ENST00000592435 PPP2R3BQ9Y5P8 575 aa12.11□□□□□ -0.47
PRKCSH-215ENST00000592435 A0A1B0GUL6 1792 aa12.1□□□□□ -0.47
PRKCSH-215ENST00000592435 UBE2Q2LH0YL09 131 aa12.1□□□□□ -0.47
PRKCSH-215ENST00000592435 FRAT2O75474 233 aaPredicted RBP12.1□□□□□ -0.47
PRKCSH-215ENST00000592435 BCAR3O75815 825 aa12.1□□□□□ -0.47
PRKCSH-215ENST00000592435 TRIM27P14373 513 aa12.1□□□□□ -0.47
PRKCSH-215ENST00000592435 BCAMP50895 628 aa12.1□□□□□ -0.47
PRKCSH-215ENST00000592435 KIF23Q02241 960 aaPredicted RBP12.1□□□□□ -0.47
PRKCSH-215ENST00000592435 ATF7IPQ6VMQ6 1270 aa12.1□□□□□ -0.47
PRKCSH-215ENST00000592435 LPIN2Q92539 896 aa12.1□□□□□ -0.47
PRKCSH-215ENST00000592435 MRIQ9BWK5 157 aa12.1□□□□□ -0.47
PRKCSH-215ENST00000592435 CEP126Q9P2H0 1117 aa12.1□□□□□ -0.47
PRKCSH-215ENST00000592435 TTF2Q9UNY4 1162 aaKnown RBP12.1□□□□□ -0.47
PRKCSH-215ENST00000592435 LRRFIP2Q9Y608 721 aaKnown RBP12.1□□□□□ -0.47
PRKCSH-215ENST00000592435 COL1A1P02452 1464 aaPredicted RBP12.09□□□□□ -0.47
PRKCSH-215ENST00000592435 SLC5A1P13866 664 aa12.09□□□□□ -0.47
PRKCSH-215ENST00000592435 IL15P40933 162 aaPredicted RBP12.09□□□□□ -0.47
PRKCSH-215ENST00000592435 RBM5P52756 815 aaKnown RBP eCLIP12.09□□□□□ -0.47
PRKCSH-215ENST00000592435 HDLBPQ00341 1268 aaKnown RBP12.09□□□□□ -0.47
PRKCSH-215ENST00000592435 MOB2Q70IA6 237 aa12.09□□□□□ -0.47
PRKCSH-215ENST00000592435 ARMC9Q7Z3E5 817 aa12.09□□□□□ -0.47
PRKCSH-215ENST00000592435 FRAT1Q92837 279 aaPredicted RBP12.09□□□□□ -0.47
PRKCSH-215ENST00000592435 COPRSQ9NQ92 184 aa12.09□□□□□ -0.47
PRKCSH-215ENST00000592435 IQSEC3Q9UPP2 1182 aaPredicted RBP12.09□□□□□ -0.47
PRKCSH-215ENST00000592435 SUGT1Q9Y2Z0 365 aa12.09□□□□□ -0.47
PRKCSH-215ENST00000592435 PCDHAC2Q9Y5I4 1007 aa12.09□□□□□ -0.47
PRKCSH-215ENST00000592435 PAPPA2Q9BXP8 1791 aa12.08□□□□□ -0.48
PRKCSH-215ENST00000592435 MTX1Q13505 466 aa12.08□□□□□ -0.48
PRKCSH-215ENST00000592435 TTLL12Q14166 644 aaPredicted RBP12.08□□□□□ -0.48
PRKCSH-215ENST00000592435 SUPT20HL1Q3ZLR7 823 aa12.08□□□□□ -0.48
PRKCSH-215ENST00000592435 LDLRAD1Q5T700 205 aa12.08□□□□□ -0.48
PRKCSH-215ENST00000592435 RASAL3Q86YV0 1011 aa12.08□□□□□ -0.48
PRKCSH-215ENST00000592435 DZIP1LQ8IYY4 767 aaKnown RBP12.08□□□□□ -0.48
PRKCSH-215ENST00000592435 CSRNP1Q96S65 589 aa12.08□□□□□ -0.48
PRKCSH-215ENST00000592435 SIL1Q9H173 461 aa12.08□□□□□ -0.48
PRKCSH-215ENST00000592435 SAGE1Q9NXZ1 904 aa12.08□□□□□ -0.48
PRKCSH-215ENST00000592435 CLRN2A0PK11 232 aa12.07□□□□□ -0.48
PRKCSH-215ENST00000592435 UNCXA6NJT0 531 aa12.07□□□□□ -0.48
PRKCSH-215ENST00000592435 ZBTB22O15209 634 aa12.07□□□□□ -0.48
PRKCSH-215ENST00000592435 CRKP46108 304 aa12.07□□□□□ -0.48
PRKCSH-215ENST00000592435 CHAF1AQ13111 956 aaPredicted RBP12.07□□□□□ -0.48
PRKCSH-215ENST00000592435 TNFAIP1Q13829 316 aa12.07□□□□□ -0.48
PRKCSH-215ENST00000592435 GRIK5Q16478 980 aa12.07□□□□□ -0.48
PRKCSH-215ENST00000592435 MAP3K11Q16584 847 aa12.07□□□□□ -0.48
PRKCSH-215ENST00000592435 ZKSCAN2Q63HK3 967 aa12.07□□□□□ -0.48
PRKCSH-215ENST00000592435 WDR66Q8TBY9 1149 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms