RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 METTL24Q5JXM2 366 aa17.39■□□□□ 0.37
CLIP3-205ENST00000592017 ZNF804AQ7Z570 1209 aa17.39■□□□□ 0.37
CLIP3-205ENST00000592017 DZIP1LQ8IYY4 767 aaKnown RBP17.39■□□□□ 0.37
CLIP3-205ENST00000592017 JAG2Q9Y219 1238 aa17.39■□□□□ 0.37
CLIP3-205ENST00000592017 SASH1O94885 1247 aa17.38■□□□□ 0.37
CLIP3-205ENST00000592017 UBE4AQ14139 1066 aa17.38■□□□□ 0.37
CLIP3-205ENST00000592017 ITPRIPQ8IWB1 547 aa17.38■□□□□ 0.37
CLIP3-205ENST00000592017 TNS4Q8IZW8 715 aa17.38■□□□□ 0.37
CLIP3-205ENST00000592017 C2orf69Q8N8R5 385 aa17.38■□□□□ 0.37
CLIP3-205ENST00000592017 ZBED3Q96IU2 234 aaPredicted RBP17.38■□□□□ 0.37
CLIP3-205ENST00000592017 FAM84BQ96KN1 310 aaPredicted RBP17.38■□□□□ 0.37
CLIP3-205ENST00000592017 ZIC5Q96T25 663 aa17.38■□□□□ 0.37
CLIP3-205ENST00000592017 MROH5Q6ZUA9 1318 aa17.38■□□□□ 0.37
CLIP3-205ENST00000592017 PITPNM2Q9BZ72 1349 aa17.38■□□□□ 0.37
CLIP3-205ENST00000592017 HSPA8P11142 646 aaKnown RBP17.37■□□□□ 0.37
CLIP3-205ENST00000592017 RLBP1P12271 317 aa17.37■□□□□ 0.37
CLIP3-205ENST00000592017 GYG1P46976 350 aa17.37■□□□□ 0.37
CLIP3-205ENST00000592017 MMP14P50281 582 aa17.37■□□□□ 0.37
CLIP3-205ENST00000592017 LBX1P52954 281 aa17.37■□□□□ 0.37
CLIP3-205ENST00000592017 PRAMEF18Q5VWM3 479 aa17.37■□□□□ 0.37
CLIP3-205ENST00000592017 SIL1Q9H173 461 aa17.37■□□□□ 0.37
CLIP3-205ENST00000592017 PRDM10Q9NQV6 1147 aa17.37■□□□□ 0.37
CLIP3-205ENST00000592017 RCAN3Q9UKA8 241 aa17.37■□□□□ 0.37
CLIP3-205ENST00000592017 TRPM7Q96QT4 1865 aa17.36■□□□□ 0.37
CLIP3-205ENST00000592017 HIBADHP31937 336 aaKnown RBP17.36■□□□□ 0.37
CLIP3-205ENST00000592017 RFX5P48382 616 aaPredicted RBP17.36■□□□□ 0.37
CLIP3-205ENST00000592017 TDRD7Q8NHU6 1098 aaKnown RBP17.36■□□□□ 0.37
CLIP3-205ENST00000592017 HDAC9Q9UKV0 1011 aa17.36■□□□□ 0.37
CLIP3-205ENST00000592017 A0A1B0GUL6 1792 aa17.35■□□□□ 0.37
CLIP3-205ENST00000592017 FAM155AB1AL88 458 aaPredicted RBP17.35■□□□□ 0.37
CLIP3-205ENST00000592017 GNAI2P04899 355 aa17.35■□□□□ 0.37
CLIP3-205ENST00000592017 FKBP1AP62942 108 aaKnown RBP17.35■□□□□ 0.37
CLIP3-205ENST00000592017 PTPN12Q05209 780 aaKnown RBP17.35■□□□□ 0.37
CLIP3-205ENST00000592017 RGMBQ6NW40 437 aa17.35■□□□□ 0.37
CLIP3-205ENST00000592017 VGLL2Q8N8G2 317 aa17.35■□□□□ 0.37
CLIP3-205ENST00000592017 PCDHAC2Q9Y5I4 1007 aa17.35■□□□□ 0.37
CLIP3-205ENST00000592017 FAM205AQ6ZU69 1335 aa17.35■□□□□ 0.37
CLIP3-205ENST00000592017 F8W031 263 aaPredicted RBP17.34■□□□□ 0.37
CLIP3-205ENST00000592017 EYA2O00167 538 aa17.34■□□□□ 0.37
CLIP3-205ENST00000592017 SRGAP3O43295 1099 aa17.34■□□□□ 0.37
CLIP3-205ENST00000592017 PSME4Q14997 1843 aa17.34■□□□□ 0.37
CLIP3-205ENST00000592017 MOB2Q70IA6 237 aa17.34■□□□□ 0.37
CLIP3-205ENST00000592017 FBXO33Q7Z6M2 555 aa17.34■□□□□ 0.37
CLIP3-205ENST00000592017 PANK1Q8TE04 598 aa17.34■□□□□ 0.37
CLIP3-205ENST00000592017 PA2G4Q9UQ80 394 aaKnown RBP17.34■□□□□ 0.37
CLIP3-205ENST00000592017 PDE8BO95263 885 aa17.33■□□□□ 0.36
CLIP3-205ENST00000592017 NOGQ13253 232 aa17.33■□□□□ 0.36
CLIP3-205ENST00000592017 DLGAP5Q15398 846 aa17.33■□□□□ 0.36
CLIP3-205ENST00000592017 MTMR14Q8NCE2 650 aa17.33■□□□□ 0.36
CLIP3-205ENST00000592017 AOX1Q06278 1338 aa17.32■□□□□ 0.36
CLIP3-205ENST00000592017 ZNF157P51786 506 aaPredicted RBP17.32■□□□□ 0.36
CLIP3-205ENST00000592017 CFAP100Q494V2 611 aa17.32■□□□□ 0.36
CLIP3-205ENST00000592017 CCDC102AQ96A19 550 aa17.32■□□□□ 0.36
CLIP3-205ENST00000592017 BEGAINQ9BUH8 593 aa17.32■□□□□ 0.36
CLIP3-205ENST00000592017 C1orf115Q9H7X2 142 aa17.32■□□□□ 0.36
CLIP3-205ENST00000592017 TSKSQ9UJT2 592 aa17.32■□□□□ 0.36
CLIP3-205ENST00000592017 ZNF646O15015 1829 aaPredicted RBP17.32■□□□□ 0.36
CLIP3-205ENST00000592017 POLR2AP24928 1970 aaKnown RBP17.31■□□□□ 0.36
CLIP3-205ENST00000592017 UBE2Q2LH0YL09 131 aa17.31■□□□□ 0.36
CLIP3-205ENST00000592017 FGFR2P21802 821 aa17.31■□□□□ 0.36
CLIP3-205ENST00000592017 FKBP1BP68106 108 aa17.31■□□□□ 0.36
CLIP3-205ENST00000592017 PUM3Q15397 648 aaKnown RBP17.31■□□□□ 0.36
CLIP3-205ENST00000592017 ATG9AQ7Z3C6 839 aa17.31■□□□□ 0.36
CLIP3-205ENST00000592017 VPS37DQ86XT2 251 aa17.31■□□□□ 0.36
CLIP3-205ENST00000592017 PRMT6Q96LA8 375 aaPredicted RBP17.31■□□□□ 0.36
CLIP3-205ENST00000592017 THSD7BQ9C0I4 1608 aa17.31■□□□□ 0.36
CLIP3-205ENST00000592017 SPDYE2BA6NHP3 402 aa17.3■□□□□ 0.36
CLIP3-205ENST00000592017 CIAO1O76071 339 aa17.3■□□□□ 0.36
CLIP3-205ENST00000592017 SPDYE6P0CI01 402 aa17.3■□□□□ 0.36
CLIP3-205ENST00000592017 MS4A1P11836 297 aa17.3■□□□□ 0.36
CLIP3-205ENST00000592017 BCAMP50895 628 aa17.3■□□□□ 0.36
CLIP3-205ENST00000592017 KIF23Q02241 960 aaPredicted RBP17.3■□□□□ 0.36
CLIP3-205ENST00000592017 GRIK5Q16478 980 aa17.3■□□□□ 0.36
CLIP3-205ENST00000592017 MFSD14BQ5SR56 506 aa17.3■□□□□ 0.36
CLIP3-205ENST00000592017 APOBEC3FQ8IUX4 373 aaKnown RBP17.3■□□□□ 0.36
CLIP3-205ENST00000592017 IQSEC3Q9UPP2 1182 aaPredicted RBP17.3■□□□□ 0.36
CLIP3-205ENST00000592017 SLC10A3P09131 477 aa17.29■□□□□ 0.36
CLIP3-205ENST00000592017 IFIT1P09914 478 aaKnown RBP17.29■□□□□ 0.36
CLIP3-205ENST00000592017 SLC5A1P13866 664 aa17.29■□□□□ 0.36
CLIP3-205ENST00000592017 MTX1Q13505 466 aa17.29■□□□□ 0.36
CLIP3-205ENST00000592017 CAVIN4Q5BKX8 364 aa17.29■□□□□ 0.36
CLIP3-205ENST00000592017 COPRSQ9NQ92 184 aa17.29■□□□□ 0.36
CLIP3-205ENST00000592017 CEP126Q9P2H0 1117 aa17.29■□□□□ 0.36
CLIP3-205ENST00000592017 FBXO3Q9UK99 471 aa17.29■□□□□ 0.36
CLIP3-205ENST00000592017 PNMA6EA0A0J9YXQ4 647 aa17.28■□□□□ 0.36
CLIP3-205ENST00000592017 CLRN2A0PK11 232 aa17.28■□□□□ 0.36
CLIP3-205ENST00000592017 ZBTB7BO15156 539 aaPredicted RBP17.28■□□□□ 0.36
CLIP3-205ENST00000592017 IL15P40933 162 aaPredicted RBP17.28■□□□□ 0.36
CLIP3-205ENST00000592017 CHAF1AQ13111 956 aaPredicted RBP17.28■□□□□ 0.36
CLIP3-205ENST00000592017 RASAL3Q86YV0 1011 aa17.28■□□□□ 0.36
CLIP3-205ENST00000592017 DEFB129Q9H1M3 183 aa17.28■□□□□ 0.36
CLIP3-205ENST00000592017 TTF2Q9UNY4 1162 aaKnown RBP17.28■□□□□ 0.36
CLIP3-205ENST00000592017 FRAT2O75474 233 aaPredicted RBP17.27■□□□□ 0.36
CLIP3-205ENST00000592017 CAPN15O75808 1086 aa17.27■□□□□ 0.36
CLIP3-205ENST00000592017 ATP2B3Q16720 1220 aa17.27■□□□□ 0.36
CLIP3-205ENST00000592017 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.27■□□□□ 0.36
CLIP3-205ENST00000592017 COG6Q9Y2V7 657 aa17.27■□□□□ 0.36
CLIP3-205ENST00000592017 CA12O43570 354 aa17.26■□□□□ 0.35
CLIP3-205ENST00000592017 RBM5P52756 815 aaKnown RBP eCLIP17.26■□□□□ 0.35
CLIP3-205ENST00000592017 TTLL12Q14166 644 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms