RNA–Protein interactions for RNA: ENST00000590035.5

RETREG3-209, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 518 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-209ENST00000590035 GRM8O00222 908 aa13.24□□□□□ -0.29
RETREG3-209ENST00000590035 TAF5LO75529 589 aa13.24□□□□□ -0.29
RETREG3-209ENST00000590035 TRPA1O75762 1119 aa13.24□□□□□ -0.29
RETREG3-209ENST00000590035 ALDH1L1O75891 902 aa13.24□□□□□ -0.29
RETREG3-209ENST00000590035 GTF2IP78347 998 aa13.24□□□□□ -0.29
RETREG3-209ENST00000590035 IFIT5Q13325 482 aaKnown RBP13.24□□□□□ -0.29
RETREG3-209ENST00000590035 DGKZQ13574 1117 aa13.24□□□□□ -0.29
RETREG3-209ENST00000590035 LDLRAD1Q5T700 205 aa13.24□□□□□ -0.29
RETREG3-209ENST00000590035 PRAMEF18Q5VWM3 479 aa13.24□□□□□ -0.29
RETREG3-209ENST00000590035 LMBR1LQ6UX01 489 aa13.24□□□□□ -0.29
RETREG3-209ENST00000590035 KIAA0825Q8IV33 1275 aa13.24□□□□□ -0.29
RETREG3-209ENST00000590035 CFHR5Q9BXR6 569 aa13.24□□□□□ -0.29
RETREG3-209ENST00000590035 ARAP2Q8WZ64 1704 aa13.24□□□□□ -0.29
RETREG3-209ENST00000590035 UBE2Q2LH0YL09 131 aa13.23□□□□□ -0.29
RETREG3-209ENST00000590035 ZEB1P37275 1124 aaPredicted RBP13.23□□□□□ -0.29
RETREG3-209ENST00000590035 TM4SF4P48230 202 aa13.23□□□□□ -0.29
RETREG3-209ENST00000590035 MAP3K11Q16584 847 aa13.23□□□□□ -0.29
RETREG3-209ENST00000590035 NOM1Q5C9Z4 860 aaKnown RBP13.23□□□□□ -0.29
RETREG3-209ENST00000590035 HELBQ8NG08 1087 aaPredicted RBP13.23□□□□□ -0.29
RETREG3-209ENST00000590035 SALL2Q9Y467 1007 aaPredicted RBP13.23□□□□□ -0.29
RETREG3-209ENST00000590035 AOX1Q06278 1338 aa13.22□□□□□ -0.29
RETREG3-209ENST00000590035 FAM205AQ6ZU69 1335 aa13.22□□□□□ -0.29
RETREG3-209ENST00000590035 CCDC85CA6NKD9 419 aa13.22□□□□□ -0.29
RETREG3-209ENST00000590035 RABL6Q3YEC7 729 aaPredicted RBP13.22□□□□□ -0.29
RETREG3-209ENST00000590035 APOBEC3FQ8IUX4 373 aaKnown RBP13.22□□□□□ -0.29
RETREG3-209ENST00000590035 ZNF594Q96JF6 807 aaPredicted RBP13.22□□□□□ -0.29
RETREG3-209ENST00000590035 PCDHAC2Q9Y5I4 1007 aa13.22□□□□□ -0.29
RETREG3-209ENST00000590035 PTPN12Q05209 780 aaKnown RBP13.21□□□□□ -0.29
RETREG3-209ENST00000590035 TDRD7Q8NHU6 1098 aaKnown RBP13.21□□□□□ -0.29
RETREG3-209ENST00000590035 SUCLG2Q96I99 432 aa13.21□□□□□ -0.29
RETREG3-209ENST00000590035 HDAC9Q9UKV0 1011 aa13.21□□□□□ -0.29
RETREG3-209ENST00000590035 SPDYE2BA6NHP3 402 aa13.2□□□□□ -0.3
RETREG3-209ENST00000590035 NBPF7P0C2Y1 421 aaPredicted RBP13.2□□□□□ -0.3
RETREG3-209ENST00000590035 SPDYE6P0CI01 402 aa13.2□□□□□ -0.3
RETREG3-209ENST00000590035 KCNJ4P48050 445 aa13.2□□□□□ -0.3
RETREG3-209ENST00000590035 ZNF804AQ7Z570 1209 aa13.2□□□□□ -0.3
RETREG3-209ENST00000590035 FBXW7Q969H0 707 aa13.2□□□□□ -0.3
RETREG3-209ENST00000590035 DEFB129Q9H1M3 183 aa13.2□□□□□ -0.3
RETREG3-209ENST00000590035 RIPOR2Q9Y4F9 1068 aa13.2□□□□□ -0.3
RETREG3-209ENST00000590035 PPP2R3BQ9Y5P8 575 aa13.2□□□□□ -0.3
RETREG3-209ENST00000590035 UNCXA6NJT0 531 aa13.19□□□□□ -0.3
RETREG3-209ENST00000590035 MLLT1Q03111 559 aaPredicted RBP13.19□□□□□ -0.3
RETREG3-209ENST00000590035 UBE4AQ14139 1066 aa13.19□□□□□ -0.3
RETREG3-209ENST00000590035 CCDC57Q2TAC2 916 aa13.19□□□□□ -0.3
RETREG3-209ENST00000590035 LDHAL6AQ6ZMR3 332 aa13.19□□□□□ -0.3
RETREG3-209ENST00000590035 CTU1Q7Z7A3 348 aaKnown RBP13.19□□□□□ -0.3
RETREG3-209ENST00000590035 MRPL50Q8N5N7 158 aaKnown RBP13.19□□□□□ -0.3
RETREG3-209ENST00000590035 ANKRD44Q8N8A2 993 aa13.19□□□□□ -0.3
RETREG3-209ENST00000590035 PRMT6Q96LA8 375 aaPredicted RBP13.19□□□□□ -0.3
RETREG3-209ENST00000590035 PUS3Q9BZE2 481 aaKnown RBP13.19□□□□□ -0.3
RETREG3-209ENST00000590035 SRCIN1Q9C0H9 1055 aa13.19□□□□□ -0.3
RETREG3-209ENST00000590035 OTOFQ9HC10 1997 aa13.18□□□□□ -0.3
RETREG3-209ENST00000590035 NF2P35240 595 aa13.18□□□□□ -0.3
RETREG3-209ENST00000590035 DLGAP5Q15398 846 aa13.18□□□□□ -0.3
RETREG3-209ENST00000590035 CFAP100Q494V2 611 aa13.18□□□□□ -0.3
RETREG3-209ENST00000590035 SPRYD7Q5W111 196 aa13.18□□□□□ -0.3
RETREG3-209ENST00000590035 VGLL2Q8N8G2 317 aa13.18□□□□□ -0.3
RETREG3-209ENST00000590035 FAM84BQ96KN1 310 aaPredicted RBP13.18□□□□□ -0.3
RETREG3-209ENST00000590035 ARMC9Q7Z3E5 817 aa13.17□□□□□ -0.3
RETREG3-209ENST00000590035 FBXO33Q7Z6M2 555 aa13.17□□□□□ -0.3
RETREG3-209ENST00000590035 FAM9BQ8IZU0 186 aa13.17□□□□□ -0.3
RETREG3-209ENST00000590035 ZNF296Q8WUU4 475 aaPredicted RBP13.17□□□□□ -0.3
RETREG3-209ENST00000590035 R3HDMLQ9H3Y0 253 aa13.17□□□□□ -0.3
RETREG3-209ENST00000590035 C9orf78Q9NZ63 289 aaPredicted RBP13.17□□□□□ -0.3
RETREG3-209ENST00000590035 FZD1Q9UP38 647 aa13.17□□□□□ -0.3
RETREG3-209ENST00000590035 CHMP3Q9Y3E7 222 aa13.17□□□□□ -0.3
RETREG3-209ENST00000590035 GPR25O00155 361 aa13.16□□□□□ -0.3
RETREG3-209ENST00000590035 SPDYE2Q495Y8 402 aa13.16□□□□□ -0.3
RETREG3-209ENST00000590035 CNNM1Q9NRU3 951 aa13.16□□□□□ -0.3
RETREG3-209ENST00000590035 SERPINA10Q9UK55 444 aa13.16□□□□□ -0.3
RETREG3-209ENST00000590035 ANGEL1Q9UNK9 670 aaKnown RBP13.16□□□□□ -0.3
RETREG3-209ENST00000590035 PTPRCP08575 1304 aa13.15□□□□□ -0.3
RETREG3-209ENST00000590035 MROH5Q6ZUA9 1318 aa13.15□□□□□ -0.3
RETREG3-209ENST00000590035 TBC1D8O95759 1140 aa13.15□□□□□ -0.3
RETREG3-209ENST00000590035 ZBTB48P10074 688 aaPredicted RBP13.15□□□□□ -0.3
RETREG3-209ENST00000590035 GYG1P46976 350 aa13.15□□□□□ -0.3
RETREG3-209ENST00000590035 SREBF2Q12772 1141 aa13.15□□□□□ -0.3
RETREG3-209ENST00000590035 TTLL12Q14166 644 aaPredicted RBP13.15□□□□□ -0.3
RETREG3-209ENST00000590035 SLC4A10Q6U841 1118 aa13.15□□□□□ -0.3
RETREG3-209ENST00000590035 CLMNQ96JQ2 1002 aa13.15□□□□□ -0.3
RETREG3-209ENST00000590035 TEPSINQ96N21 525 aa13.15□□□□□ -0.3
RETREG3-209ENST00000590035 USP44Q9H0E7 712 aa13.15□□□□□ -0.3
RETREG3-209ENST00000590035 BICC1Q9H694 974 aaKnown RBP13.15□□□□□ -0.3
RETREG3-209ENST00000590035 JAG2Q9Y219 1238 aa13.15□□□□□ -0.3
RETREG3-209ENST00000590035 KIF16BQ96L93 1317 aa13.14□□□□□ -0.31
RETREG3-209ENST00000590035 CLRN2A0PK11 232 aa13.14□□□□□ -0.31
RETREG3-209ENST00000590035 F8W031 263 aaPredicted RBP13.14□□□□□ -0.31
RETREG3-209ENST00000590035 USP2O75604 605 aaPredicted RBP13.14□□□□□ -0.31
RETREG3-209ENST00000590035 HIBADHP31937 336 aaKnown RBP13.14□□□□□ -0.31
RETREG3-209ENST00000590035 GJA5P36382 358 aa13.14□□□□□ -0.31
RETREG3-209ENST00000590035 RFX5P48382 616 aaPredicted RBP13.14□□□□□ -0.31
RETREG3-209ENST00000590035 SLFN5Q08AF3 891 aa13.14□□□□□ -0.31
RETREG3-209ENST00000590035 PRKG1Q13976 671 aa13.14□□□□□ -0.31
RETREG3-209ENST00000590035 GRIK5Q16478 980 aa13.14□□□□□ -0.31
RETREG3-209ENST00000590035 PKN2Q16513 984 aaKnown RBP13.14□□□□□ -0.31
RETREG3-209ENST00000590035 LRRC24Q50LG9 513 aa13.14□□□□□ -0.31
RETREG3-209ENST00000590035 MFSD14BQ5SR56 506 aa13.14□□□□□ -0.31
RETREG3-209ENST00000590035 NBPF12Q5TAG4 269 aaPredicted RBP13.14□□□□□ -0.31
RETREG3-209ENST00000590035 TRMT2AQ8IZ69 625 aaKnown RBP13.14□□□□□ -0.31
RETREG3-209ENST00000590035 SSH1Q8WYL5 1049 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms