RNA–Protein interactions for RNA: ENST00000589293.5

LINC01539-202, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-202ENST00000589293 TRAF7Q6Q0C0 670 aa7.5□□□□□ -1.21
LINC01539-202ENST00000589293 BICDL1Q6ZP65 573 aa7.5□□□□□ -1.21
LINC01539-202ENST00000589293 VASH1Q7L8A9 365 aaPredicted RBP7.5□□□□□ -1.21
LINC01539-202ENST00000589293 ZNF622Q969S3 477 aaKnown RBP eCLIP7.5□□□□□ -1.21
LINC01539-202ENST00000589293 TEX13AQ9BXU3 409 aaPredicted RBP7.5□□□□□ -1.21
LINC01539-202ENST00000589293 SOS1Q07889 1333 aaPredicted RBP7.5□□□□□ -1.21
LINC01539-202ENST00000589293 U2SURPO15042 1029 aaKnown RBP7.49□□□□□ -1.21
LINC01539-202ENST00000589293 ALDH1A1P00352 501 aa7.49□□□□□ -1.21
LINC01539-202ENST00000589293 CYP19A1P11511 503 aaPredicted RBP7.49□□□□□ -1.21
LINC01539-202ENST00000589293 IL13P35225 146 aa7.49□□□□□ -1.21
LINC01539-202ENST00000589293 SLC39A6Q13433 755 aa7.49□□□□□ -1.21
LINC01539-202ENST00000589293 CNGB1Q14028 1251 aaPredicted RBP7.49□□□□□ -1.21
LINC01539-202ENST00000589293 NFIXQ14938 502 aa7.49□□□□□ -1.21
LINC01539-202ENST00000589293 TNS4Q8IZW8 715 aa7.49□□□□□ -1.21
LINC01539-202ENST00000589293 DNAJC5GQ8N7S2 189 aa7.49□□□□□ -1.21
LINC01539-202ENST00000589293 PPP1R12CQ9BZL4 782 aa7.49□□□□□ -1.21
LINC01539-202ENST00000589293 CEP350Q5VT06 3117 aa7.49□□□□□ -1.21
LINC01539-202ENST00000589293 ARFGEF1Q9Y6D6 1849 aa7.48□□□□□ -1.21
LINC01539-202ENST00000589293 PALM3A6NDB9 673 aaPredicted RBP7.48□□□□□ -1.21
LINC01539-202ENST00000589293 GLTPD2A6NH11 291 aa7.48□□□□□ -1.21
LINC01539-202ENST00000589293 ST5P78524 1137 aa7.48□□□□□ -1.21
LINC01539-202ENST00000589293 HTRA3P83110 453 aa7.48□□□□□ -1.21
LINC01539-202ENST00000589293 RASSF7Q02833 373 aa7.48□□□□□ -1.21
LINC01539-202ENST00000589293 NBPF20Q3BBV1 942 aa7.48□□□□□ -1.21
LINC01539-202ENST00000589293 SOGA3Q5TF21 947 aa7.48□□□□□ -1.21
LINC01539-202ENST00000589293 GAS2L2Q8NHY3 880 aa7.48□□□□□ -1.21
LINC01539-202ENST00000589293 SNIP1Q8TAD8 396 aaKnown RBP7.48□□□□□ -1.21
LINC01539-202ENST00000589293 WDR90Q96KV7 1748 aa7.48□□□□□ -1.21
LINC01539-202ENST00000589293 KLF16Q9BXK1 252 aaPredicted RBP7.48□□□□□ -1.21
LINC01539-202ENST00000589293 LGR6Q9HBX8 967 aa7.48□□□□□ -1.21
LINC01539-202ENST00000589293 TFIP11Q9UBB9 837 aaKnown RBP7.48□□□□□ -1.21
LINC01539-202ENST00000589293 ZBTB1Q9Y2K1 713 aa7.48□□□□□ -1.21
LINC01539-202ENST00000589293 TNRC6CQ9HCJ0 1690 aaKnown RBP7.47□□□□□ -1.21
LINC01539-202ENST00000589293 GNAT3A8MTJ3 354 aa7.47□□□□□ -1.21
LINC01539-202ENST00000589293 ERVH48-1M5A8F1 160 aa7.47□□□□□ -1.21
LINC01539-202ENST00000589293 RAB15P59190 212 aa7.47□□□□□ -1.21
LINC01539-202ENST00000589293 MCCD1P59942 119 aaPredicted RBP7.47□□□□□ -1.21
LINC01539-202ENST00000589293 MTHFSDQ2M296 383 aaKnown RBP7.47□□□□□ -1.21
LINC01539-202ENST00000589293 CC2D1BQ5T0F9 858 aaKnown RBP7.47□□□□□ -1.21
LINC01539-202ENST00000589293 CNBD1Q8NA66 436 aa7.47□□□□□ -1.21
LINC01539-202ENST00000589293 CFAP53Q96M91 514 aa7.47□□□□□ -1.21
LINC01539-202ENST00000589293 FMNL2Q96PY5 1086 aa7.47□□□□□ -1.21
LINC01539-202ENST00000589293 SETDB2Q96T68 719 aa7.47□□□□□ -1.21
LINC01539-202ENST00000589293 TMPRSS4Q9NRS4 437 aa7.47□□□□□ -1.21
LINC01539-202ENST00000589293 CDV3Q9UKY7 258 aaKnown RBP7.47□□□□□ -1.21
LINC01539-202ENST00000589293 MAFBQ9Y5Q3 323 aaPredicted RBP7.47□□□□□ -1.21
LINC01539-202ENST00000589293 MYH14Q7Z406 1995 aaKnown RBP7.47□□□□□ -1.21
LINC01539-202ENST00000589293 KIAA1551Q9HCM1 1747 aa7.47□□□□□ -1.21
LINC01539-202ENST00000589293 CARMIL3Q8ND23 1372 aa7.46□□□□□ -1.21
LINC01539-202ENST00000589293 C21orf2O43822 256 aa7.46□□□□□ -1.22
LINC01539-202ENST00000589293 ATP9BO43861 1147 aa7.46□□□□□ -1.22
LINC01539-202ENST00000589293 NEFMP07197 916 aa7.46□□□□□ -1.22
LINC01539-202ENST00000589293 SCTRP47872 440 aa7.46□□□□□ -1.22
LINC01539-202ENST00000589293 NNTQ13423 1086 aa7.46□□□□□ -1.22
LINC01539-202ENST00000589293 RNF135Q8IUD6 432 aa7.46□□□□□ -1.22
LINC01539-202ENST00000589293 DEPDC4Q8N2C3 294 aa7.46□□□□□ -1.22
LINC01539-202ENST00000589293 JMYQ8N9B5 988 aa7.46□□□□□ -1.22
LINC01539-202ENST00000589293 RTF1Q92541 710 aaKnown RBP7.46□□□□□ -1.22
LINC01539-202ENST00000589293 CNKSR1Q969H4 720 aa7.46□□□□□ -1.22
LINC01539-202ENST00000589293 ARID3AQ99856 593 aa7.46□□□□□ -1.22
LINC01539-202ENST00000589293 BRIP1Q9BX63 1249 aa7.46□□□□□ -1.22
LINC01539-202ENST00000589293 NUDCQ9Y266 331 aa7.46□□□□□ -1.22
LINC01539-202ENST00000589293 ZNF652Q9Y2D9 606 aa7.46□□□□□ -1.22
LINC01539-202ENST00000589293 TJP1Q07157 1748 aa7.46□□□□□ -1.22
LINC01539-202ENST00000589293 SCN11AQ9UI33 1791 aa7.46□□□□□ -1.22
LINC01539-202ENST00000589293 BRCA1P38398 1863 aaKnown RBP7.45□□□□□ -1.22
LINC01539-202ENST00000589293 IQCA1LA6NCM1 817 aa7.45□□□□□ -1.22
LINC01539-202ENST00000589293 USP17L5A8MUK1 530 aa7.45□□□□□ -1.22
LINC01539-202ENST00000589293 SKIP12755 728 aa7.45□□□□□ -1.22
LINC01539-202ENST00000589293 GTF2E1P29083 439 aaPredicted RBP7.45□□□□□ -1.22
LINC01539-202ENST00000589293 IL6STP40189 918 aaPredicted RBP7.45□□□□□ -1.22
LINC01539-202ENST00000589293 SLFNL1Q499Z3 407 aa7.45□□□□□ -1.22
LINC01539-202ENST00000589293 ZNF790Q6PG37 636 aa7.45□□□□□ -1.22
LINC01539-202ENST00000589293 CYP4X1Q8N118 509 aa7.45□□□□□ -1.22
LINC01539-202ENST00000589293 PLPP7Q8NBV4 271 aa7.45□□□□□ -1.22
LINC01539-202ENST00000589293 HPS1Q92902 700 aa7.45□□□□□ -1.22
LINC01539-202ENST00000589293 TAOK3Q9H2K8 898 aa7.45□□□□□ -1.22
LINC01539-202ENST00000589293 USP17L3A6NCW0 530 aa7.44□□□□□ -1.22
LINC01539-202ENST00000589293 USP17L4A6NCW7 530 aa7.44□□□□□ -1.22
LINC01539-202ENST00000589293 BTBD11A6QL63 1104 aa7.44□□□□□ -1.22
LINC01539-202ENST00000589293 LILRA1O75019 489 aa7.44□□□□□ -1.22
LINC01539-202ENST00000589293 HSPA1AP0DMV8 641 aaKnown RBP7.44□□□□□ -1.22
LINC01539-202ENST00000589293 HSPA1BP0DMV9 641 aaKnown RBP7.44□□□□□ -1.22
LINC01539-202ENST00000589293 EIF5P55010 431 aaKnown RBP7.44□□□□□ -1.22
LINC01539-202ENST00000589293 NR5A1Q13285 461 aa7.44□□□□□ -1.22
LINC01539-202ENST00000589293 PPP1R26Q5T8A7 1209 aaPredicted RBP7.44□□□□□ -1.22
LINC01539-202ENST00000589293 COL13A1Q5TAT6 717 aaPredicted RBP7.44□□□□□ -1.22
LINC01539-202ENST00000589293 TBC1D9BQ66K14 1250 aa7.44□□□□□ -1.22
LINC01539-202ENST00000589293 USP17L2Q6R6M4 530 aa7.44□□□□□ -1.22
LINC01539-202ENST00000589293 USP17L1Q7RTZ2 530 aa7.44□□□□□ -1.22
LINC01539-202ENST00000589293 NBPF5PQ86XG9 351 aaPredicted RBP7.44□□□□□ -1.22
LINC01539-202ENST00000589293 AIDAQ96BJ3 306 aa7.44□□□□□ -1.22
LINC01539-202ENST00000589293 ZNF496Q96IT1 587 aaPredicted RBP7.44□□□□□ -1.22
LINC01539-202ENST00000589293 SERPINA10Q9UK55 444 aa7.44□□□□□ -1.22
LINC01539-202ENST00000589293 HEG1Q9ULI3 1381 aa7.44□□□□□ -1.22
LINC01539-202ENST00000589293 MRC1P22897 1456 aa7.43□□□□□ -1.22
LINC01539-202ENST00000589293 TTC24A2A3L6 582 aaPredicted RBP7.43□□□□□ -1.22
LINC01539-202ENST00000589293 NFKBIEO00221 500 aa7.43□□□□□ -1.22
LINC01539-202ENST00000589293 NCOA4Q13772 614 aa7.43□□□□□ -1.22
LINC01539-202ENST00000589293 STYK1Q6J9G0 422 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms