RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 B4GALNT3Q6L9W6 998 aa23.28■■□□□ 1.32
CLPTM1-209ENST00000588855 ZBTB12Q9Y330 459 aaPredicted RBP23.28■■□□□ 1.32
CLPTM1-209ENST00000588855 FAM205AQ6ZU69 1335 aa23.27■■□□□ 1.32
CLPTM1-209ENST00000588855 ARID4AP29374 1257 aaPredicted RBP23.27■■□□□ 1.32
CLPTM1-209ENST00000588855 RASGRF1Q13972 1273 aa23.27■■□□□ 1.32
CLPTM1-209ENST00000588855 CCDC158Q5M9N0 1113 aa23.27■■□□□ 1.32
CLPTM1-209ENST00000588855 TTC39AQ5SRH9 613 aa23.27■■□□□ 1.32
CLPTM1-209ENST00000588855 KDM2BQ8NHM5 1336 aa23.27■■□□□ 1.32
CLPTM1-209ENST00000588855 GMPSP49915 693 aaPredicted RBP23.26■■□□□ 1.31
CLPTM1-209ENST00000588855 RSBN1LQ6PCB5 846 aaPredicted RBP23.26■■□□□ 1.31
CLPTM1-209ENST00000588855 SCN4AP35499 1836 aa23.25■■□□□ 1.31
CLPTM1-209ENST00000588855 SEMA3EO15041 775 aa23.25■■□□□ 1.31
CLPTM1-209ENST00000588855 SCARF1Q14162 830 aa23.25■■□□□ 1.31
CLPTM1-209ENST00000588855 L3MBTL3Q96JM7 780 aaPredicted RBP23.25■■□□□ 1.31
CLPTM1-209ENST00000588855 UQCRFS1P1P0C7P4 283 aa23.24■■□□□ 1.31
CLPTM1-209ENST00000588855 SCNN1DP51172 638 aa23.24■■□□□ 1.31
CLPTM1-209ENST00000588855 PI16Q6UXB8 463 aa23.24■■□□□ 1.31
CLPTM1-209ENST00000588855 C16orf71Q8IYS4 520 aaPredicted RBP23.24■■□□□ 1.31
CLPTM1-209ENST00000588855 CERS5Q8N5B7 392 aa23.24■■□□□ 1.31
CLPTM1-209ENST00000588855 ZBTB47Q9UFB7 747 aaPredicted RBP23.24■■□□□ 1.31
CLPTM1-209ENST00000588855 DENND2AQ9ULE3 1009 aa23.24■■□□□ 1.31
CLPTM1-209ENST00000588855 ZBTB22O15209 634 aa23.23■■□□□ 1.31
CLPTM1-209ENST00000588855 MCAMP43121 646 aa23.23■■□□□ 1.31
CLPTM1-209ENST00000588855 ERICH6BQ5W0A0 696 aa23.23■■□□□ 1.31
CLPTM1-209ENST00000588855 OTUD7AQ8TE49 926 aaPredicted RBP23.23■■□□□ 1.31
CLPTM1-209ENST00000588855 LNPKQ9C0E8 428 aa23.23■■□□□ 1.31
CLPTM1-209ENST00000588855 HMG20BQ9P0W2 317 aa23.23■■□□□ 1.31
CLPTM1-209ENST00000588855 NUCB1Q02818 461 aa23.23■■□□□ 1.31
CLPTM1-209ENST00000588855 MFSD14BQ5SR56 506 aa23.23■■□□□ 1.31
CLPTM1-209ENST00000588855 CCDC136Q96JN2 1154 aa23.23■■□□□ 1.31
CLPTM1-209ENST00000588855 ZNF512BQ96KM6 892 aaPredicted RBP23.23■■□□□ 1.31
CLPTM1-209ENST00000588855 GMLQ99445 158 aa23.23■■□□□ 1.31
CLPTM1-209ENST00000588855 PDS5AQ29RF7 1337 aaKnown RBP23.22■■□□□ 1.31
CLPTM1-209ENST00000588855 MYO3BQ8WXR4 1341 aa23.22■■□□□ 1.31
CLPTM1-209ENST00000588855 SHTN1A0MZ66 631 aa23.22■■□□□ 1.31
CLPTM1-209ENST00000588855 POTECB2RU33 542 aa23.22■■□□□ 1.31
CLPTM1-209ENST00000588855 RPS12P25398 132 aaKnown RBP23.22■■□□□ 1.31
CLPTM1-209ENST00000588855 CHD1LQ86WJ1 897 aa23.22■■□□□ 1.31
CLPTM1-209ENST00000588855 SPATA5Q8NB90 893 aa23.22■■□□□ 1.31
CLPTM1-209ENST00000588855 AGBL3Q8NEM8 1001 aa23.22■■□□□ 1.31
CLPTM1-209ENST00000588855 NMRK2Q9NPI5 230 aa23.22■■□□□ 1.31
CLPTM1-209ENST00000588855 FKBP1AP62942 108 aaKnown RBP23.21■■□□□ 1.31
CLPTM1-209ENST00000588855 SNRKQ9NRH2 765 aa23.21■■□□□ 1.31
CLPTM1-209ENST00000588855 GPRC5DQ9NZD1 345 aa23.21■■□□□ 1.31
CLPTM1-209ENST00000588855 SALL3Q9BXA9 1300 aa23.2■■□□□ 1.3
CLPTM1-209ENST00000588855 MYO5AQ9Y4I1 1855 aaKnown RBP23.2■■□□□ 1.3
CLPTM1-209ENST00000588855 WDR66Q8TBY9 1149 aa23.2■■□□□ 1.3
CLPTM1-209ENST00000588855 TBC1D22AQ8WUA7 517 aa23.2■■□□□ 1.3
CLPTM1-209ENST00000588855 DPF2Q92785 391 aa23.2■■□□□ 1.3
CLPTM1-209ENST00000588855 ADAMTSL1Q8N6G6 1762 aa23.19■■□□□ 1.3
CLPTM1-209ENST00000588855 LMOD1P29536 600 aaPredicted RBP23.19■■□□□ 1.3
CLPTM1-209ENST00000588855 GRIK5Q16478 980 aa23.19■■□□□ 1.3
CLPTM1-209ENST00000588855 TSHZ3Q63HK5 1081 aa23.19■■□□□ 1.3
CLPTM1-209ENST00000588855 KIAA0825Q8IV33 1275 aa23.19■■□□□ 1.3
CLPTM1-209ENST00000588855 MICALL2Q8IY33 904 aa23.19■■□□□ 1.3
CLPTM1-209ENST00000588855 ZNF784Q8NCA9 323 aaPredicted RBP23.19■■□□□ 1.3
CLPTM1-209ENST00000588855 RRAGCQ9HB90 399 aa23.19■■□□□ 1.3
CLPTM1-209ENST00000588855 GPBP1L1Q9HC44 474 aaPredicted RBP23.19■■□□□ 1.3
CLPTM1-209ENST00000588855 EPS15P42566 896 aa23.18■■□□□ 1.3
CLPTM1-209ENST00000588855 ECHDC1Q9NTX5 307 aa23.18■■□□□ 1.3
CLPTM1-209ENST00000588855 CNOT7Q9UIV1 285 aaKnown RBP23.18■■□□□ 1.3
CLPTM1-209ENST00000588855 NDUFB9Q9Y6M9 179 aa23.18■■□□□ 1.3
CLPTM1-209ENST00000588855 SALL1Q9NSC2 1324 aa23.18■■□□□ 1.3
CLPTM1-209ENST00000588855 F8W031 263 aaPredicted RBP23.18■■□□□ 1.3
CLPTM1-209ENST00000588855 ZAP70P43403 619 aa23.18■■□□□ 1.3
CLPTM1-209ENST00000588855 CENPQQ7L2Z9 268 aaPredicted RBP23.18■■□□□ 1.3
CLPTM1-209ENST00000588855 PPP4R2Q9NY27 417 aa23.18■■□□□ 1.3
CLPTM1-209ENST00000588855 HACL1Q9UJ83 578 aa23.18■■□□□ 1.3
CLPTM1-209ENST00000588855 DOCK2Q92608 1830 aa23.17■■□□□ 1.3
CLPTM1-209ENST00000588855 IQCA1LA6NCM1 817 aa23.17■■□□□ 1.3
CLPTM1-209ENST00000588855 USP17L8P0C7I0 530 aa23.17■■□□□ 1.3
CLPTM1-209ENST00000588855 ATP5JP18859 108 aa23.17■■□□□ 1.3
CLPTM1-209ENST00000588855 MX1P20591 662 aa23.17■■□□□ 1.3
CLPTM1-209ENST00000588855 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.17■■□□□ 1.3
CLPTM1-209ENST00000588855 GPATCH3Q96I76 525 aa23.17■■□□□ 1.3
CLPTM1-209ENST00000588855 PRDX5P30044 214 aa23.16■■□□□ 1.3
CLPTM1-209ENST00000588855 TBC1D9Q6ZT07 1266 aa23.16■■□□□ 1.3
CLPTM1-209ENST00000588855 MAST2Q6P0Q8 1798 aa23.15■■□□□ 1.3
CLPTM1-209ENST00000588855 CYP2E1P05181 493 aaPredicted RBP23.15■■□□□ 1.3
CLPTM1-209ENST00000588855 VEGFAP15692 232 aaPredicted RBP23.15■■□□□ 1.3
CLPTM1-209ENST00000588855 BOLA2Q9H3K6 86 aa23.15■■□□□ 1.3
CLPTM1-209ENST00000588855 TAF1DQ9H5J8 278 aaPredicted RBP23.15■■□□□ 1.3
CLPTM1-209ENST00000588855 ABCF2Q9UG63 623 aa23.15■■□□□ 1.3
CLPTM1-209ENST00000588855 TTC41PQ6P2S7 1318 aa23.15■■□□□ 1.3
CLPTM1-209ENST00000588855 H7C1D1 291 aa23.14■■□□□ 1.3
CLPTM1-209ENST00000588855 EPHX2P34913 555 aa23.14■■□□□ 1.3
CLPTM1-209ENST00000588855 ZNF280AP59817 542 aaPredicted RBP23.14■■□□□ 1.3
CLPTM1-209ENST00000588855 ZGPATQ8N5A5 531 aaKnown RBP23.14■■□□□ 1.3
CLPTM1-209ENST00000588855 DNAJC2Q99543 621 aaKnown RBP23.14■■□□□ 1.3
CLPTM1-209ENST00000588855 TTF2Q9UNY4 1162 aaKnown RBP23.14■■□□□ 1.3
CLPTM1-209ENST00000588855 EGFRP00533 1210 aa23.13■■□□□ 1.29
CLPTM1-209ENST00000588855 SAMD7Q7Z3H4 446 aa23.13■■□□□ 1.29
CLPTM1-209ENST00000588855 ADARB2Q9NS39 739 aaKnown RBP23.13■■□□□ 1.29
CLPTM1-209ENST00000588855 LDHBP07195 334 aaKnown RBP23.13■■□□□ 1.29
CLPTM1-209ENST00000588855 PDE4AP27815 886 aa23.13■■□□□ 1.29
CLPTM1-209ENST00000588855 TBC1D10BQ4KMP7 808 aaPredicted RBP23.13■■□□□ 1.29
CLPTM1-209ENST00000588855 OGFOD1Q8N543 542 aa23.13■■□□□ 1.29
CLPTM1-209ENST00000588855 PI4K2BQ8TCG2 481 aa23.13■■□□□ 1.29
CLPTM1-209ENST00000588855 TRPM4Q8TD43 1214 aa23.13■■□□□ 1.29
CLPTM1-209ENST00000588855 ANTXR1Q9H6X2 564 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms