RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 XAGE2Q96GT9 111 aa24.77■■□□□ 1.56
ATG4D-208ENST00000588667 NEUROD6Q96NK8 337 aa24.77■■□□□ 1.56
ATG4D-208ENST00000588667 CNOT7Q9UIV1 285 aaKnown RBP24.77■■□□□ 1.56
ATG4D-208ENST00000588667 RAB11FIP3O75154 756 aa24.76■■□□□ 1.55
ATG4D-208ENST00000588667 FRAT2O75474 233 aaPredicted RBP24.76■■□□□ 1.55
ATG4D-208ENST00000588667 PNMA8AQ86V59 439 aaPredicted RBP24.76■■□□□ 1.55
ATG4D-208ENST00000588667 ADARB2Q9NS39 739 aaKnown RBP24.76■■□□□ 1.55
ATG4D-208ENST00000588667 GNL3LQ9NVN8 582 aaKnown RBP24.76■■□□□ 1.55
ATG4D-208ENST00000588667 IQSEC3Q9UPP2 1182 aaPredicted RBP24.76■■□□□ 1.55
ATG4D-208ENST00000588667 H7C1D1 291 aa24.75■■□□□ 1.55
ATG4D-208ENST00000588667 TOMM70O94826 608 aa24.75■■□□□ 1.55
ATG4D-208ENST00000588667 IGHDP01880 384 aa24.75■■□□□ 1.55
ATG4D-208ENST00000588667 FKBP1AP62942 108 aaKnown RBP24.75■■□□□ 1.55
ATG4D-208ENST00000588667 CCDC102BQ68D86 513 aa24.75■■□□□ 1.55
ATG4D-208ENST00000588667 RHPN1Q8TCX5 695 aa24.75■■□□□ 1.55
ATG4D-208ENST00000588667 KIF1BPQ96EK5 621 aa24.75■■□□□ 1.55
ATG4D-208ENST00000588667 MXD3Q9BW11 206 aa24.75■■□□□ 1.55
ATG4D-208ENST00000588667 ADAMTSL1Q8N6G6 1762 aa24.75■■□□□ 1.55
ATG4D-208ENST00000588667 ZBTB22O15209 634 aa24.75■■□□□ 1.55
ATG4D-208ENST00000588667 PHKA1P46020 1223 aa24.75■■□□□ 1.55
ATG4D-208ENST00000588667 HDAC1Q13547 482 aaPredicted RBP24.74■■□□□ 1.55
ATG4D-208ENST00000588667 JAG2Q9Y219 1238 aa24.74■■□□□ 1.55
ATG4D-208ENST00000588667 SHTN1A0MZ66 631 aa24.73■■□□□ 1.55
ATG4D-208ENST00000588667 SEMA3EO15041 775 aa24.73■■□□□ 1.55
ATG4D-208ENST00000588667 USP17L8P0C7I0 530 aa24.73■■□□□ 1.55
ATG4D-208ENST00000588667 USP50Q70EL3 339 aaPredicted RBP24.73■■□□□ 1.55
ATG4D-208ENST00000588667 CERS5Q8N5B7 392 aa24.73■■□□□ 1.55
ATG4D-208ENST00000588667 APBB1O00213 710 aa24.72■■□□□ 1.55
ATG4D-208ENST00000588667 EAPPQ56P03 285 aaPredicted RBP24.72■■□□□ 1.55
ATG4D-208ENST00000588667 GORABQ5T7V8 394 aa24.72■■□□□ 1.55
ATG4D-208ENST00000588667 RBM46Q8TBY0 533 aaKnown RBP24.72■■□□□ 1.55
ATG4D-208ENST00000588667 DCTPP1Q9H773 170 aa24.72■■□□□ 1.55
ATG4D-208ENST00000588667 COL1A1P02452 1464 aaPredicted RBP24.72■■□□□ 1.55
ATG4D-208ENST00000588667 ZNF280AP59817 542 aaPredicted RBP24.72■■□□□ 1.55
ATG4D-208ENST00000588667 CHAF1AQ13111 956 aaPredicted RBP24.72■■□□□ 1.55
ATG4D-208ENST00000588667 MFSD14BQ5SR56 506 aa24.72■■□□□ 1.55
ATG4D-208ENST00000588667 TBC1D22AQ8WUA7 517 aa24.72■■□□□ 1.55
ATG4D-208ENST00000588667 EAF2Q96CJ1 260 aaPredicted RBP24.72■■□□□ 1.55
ATG4D-208ENST00000588667 MMP14P50281 582 aa24.71■■□□□ 1.55
ATG4D-208ENST00000588667 LDHDQ86WU2 507 aa24.71■■□□□ 1.55
ATG4D-208ENST00000588667 CLASRPQ8N2M8 674 aaKnown RBP24.71■■□□□ 1.55
ATG4D-208ENST00000588667 IL1RAPL2Q9NP60 686 aa24.71■■□□□ 1.55
ATG4D-208ENST00000588667 POTEIP0CG38 1075 aa24.7■■□□□ 1.54
ATG4D-208ENST00000588667 POTEJP0CG39 1038 aa24.7■■□□□ 1.54
ATG4D-208ENST00000588667 KIAA0825Q8IV33 1275 aa24.7■■□□□ 1.54
ATG4D-208ENST00000588667 OGFOD1Q8N543 542 aa24.7■■□□□ 1.54
ATG4D-208ENST00000588667 DBNDD2Q9BQY9 259 aa24.7■■□□□ 1.54
ATG4D-208ENST00000588667 DBNLQ9UJU6 430 aaKnown RBP24.7■■□□□ 1.54
ATG4D-208ENST00000588667 DENND2AQ9ULE3 1009 aa24.7■■□□□ 1.54
ATG4D-208ENST00000588667 AACSQ86V21 672 aa24.69■■□□□ 1.54
ATG4D-208ENST00000588667 WDR66Q8TBY9 1149 aa24.69■■□□□ 1.54
ATG4D-208ENST00000588667 TRPM4Q8TD43 1214 aa24.69■■□□□ 1.54
ATG4D-208ENST00000588667 LRRCC1Q9C099 1032 aa24.69■■□□□ 1.54
ATG4D-208ENST00000588667 PDS5AQ29RF7 1337 aaKnown RBP24.69■■□□□ 1.54
ATG4D-208ENST00000588667 ARID4AP29374 1257 aaPredicted RBP24.68■■□□□ 1.54
ATG4D-208ENST00000588667 RASGRF1Q13972 1273 aa24.68■■□□□ 1.54
ATG4D-208ENST00000588667 SAMD7Q7Z3H4 446 aa24.68■■□□□ 1.54
ATG4D-208ENST00000588667 KIF4BQ2VIQ3 1234 aa24.68■■□□□ 1.54
ATG4D-208ENST00000588667 TBC1D10BQ4KMP7 808 aaPredicted RBP24.68■■□□□ 1.54
ATG4D-208ENST00000588667 CCDC158Q5M9N0 1113 aa24.68■■□□□ 1.54
ATG4D-208ENST00000588667 SMC1BQ8NDV3 1235 aa24.68■■□□□ 1.54
ATG4D-208ENST00000588667 CCDC8Q9H0W5 538 aaPredicted RBP24.68■■□□□ 1.54
ATG4D-208ENST00000588667 MYOZ2Q9NPC6 264 aa24.68■■□□□ 1.54
ATG4D-208ENST00000588667 TLR7Q9NYK1 1049 aaKnown RBP24.68■■□□□ 1.54
ATG4D-208ENST00000588667 HDAC9Q9UKV0 1011 aa24.68■■□□□ 1.54
ATG4D-208ENST00000588667 AKAP11Q9UKA4 1901 aa24.67■■□□□ 1.54
ATG4D-208ENST00000588667 UQCRFS1P1P0C7P4 283 aa24.67■■□□□ 1.54
ATG4D-208ENST00000588667 EGFRP00533 1210 aa24.66■■□□□ 1.54
ATG4D-208ENST00000588667 HIRAP54198 1017 aaPredicted RBP24.66■■□□□ 1.54
ATG4D-208ENST00000588667 CHADLQ6NUI6 762 aa24.66■■□□□ 1.54
ATG4D-208ENST00000588667 SUGT1Q9Y2Z0 365 aa24.66■■□□□ 1.54
ATG4D-208ENST00000588667 FSTL1Q12841 308 aa24.65■■□□□ 1.54
ATG4D-208ENST00000588667 TTC39AQ5SRH9 613 aa24.65■■□□□ 1.54
ATG4D-208ENST00000588667 ZNF512BQ96KM6 892 aaPredicted RBP24.65■■□□□ 1.54
ATG4D-208ENST00000588667 CLEC11AQ9Y240 323 aa24.65■■□□□ 1.54
ATG4D-208ENST00000588667 SALL1Q9NSC2 1324 aa24.65■■□□□ 1.54
ATG4D-208ENST00000588667 F8W031 263 aaPredicted RBP24.64■■□□□ 1.54
ATG4D-208ENST00000588667 RBM26Q5T8P6 1007 aaKnown RBP24.64■■□□□ 1.54
ATG4D-208ENST00000588667 ZC3H15Q8WU90 426 aaKnown RBP24.64■■□□□ 1.54
ATG4D-208ENST00000588667 IFIT2P09913 472 aaKnown RBP24.64■■□□□ 1.53
ATG4D-208ENST00000588667 TTF2Q9UNY4 1162 aaKnown RBP24.64■■□□□ 1.53
ATG4D-208ENST00000588667 POLR2AP24928 1970 aaKnown RBP24.63■■□□□ 1.53
ATG4D-208ENST00000588667 C1QTNF8P60827 252 aa24.63■■□□□ 1.53
ATG4D-208ENST00000588667 SPATA5Q8NB90 893 aa24.63■■□□□ 1.53
ATG4D-208ENST00000588667 HMG20BQ9P0W2 317 aa24.63■■□□□ 1.53
ATG4D-208ENST00000588667 ECM29Q5VYK3 1845 aa24.63■■□□□ 1.53
ATG4D-208ENST00000588667 MCAMP43121 646 aa24.62■■□□□ 1.53
ATG4D-208ENST00000588667 SCARF1Q14162 830 aa24.62■■□□□ 1.53
ATG4D-208ENST00000588667 GRIK5Q16478 980 aa24.62■■□□□ 1.53
ATG4D-208ENST00000588667 ZGPATQ8N5A5 531 aaKnown RBP24.62■■□□□ 1.53
ATG4D-208ENST00000588667 GCC1Q96CN9 775 aa24.62■■□□□ 1.53
ATG4D-208ENST00000588667 PGAP2Q9UHJ9 254 aa24.62■■□□□ 1.53
ATG4D-208ENST00000588667 MAST3O60307 1309 aa24.62■■□□□ 1.53
ATG4D-208ENST00000588667 SMARCA5O60264 1052 aaPredicted RBP24.61■■□□□ 1.53
ATG4D-208ENST00000588667 SMC5Q8IY18 1101 aa24.61■■□□□ 1.53
ATG4D-208ENST00000588667 PI16Q6UXB8 463 aa24.61■■□□□ 1.53
ATG4D-208ENST00000588667 MTMR14Q8NCE2 650 aa24.61■■□□□ 1.53
ATG4D-208ENST00000588667 BCL11AQ9H165 835 aa24.61■■□□□ 1.53
ATG4D-208ENST00000588667 SERPINA10Q9UK55 444 aa24.61■■□□□ 1.53
ATG4D-208ENST00000588667 MAP1SQ66K74 1059 aaPredicted RBP24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms