RNA–Protein interactions for RNA: ENST00000585543.6

GFAP-205, Transcript of glial fibrillary acidic protein, humanhuman

TSL 1 (best)

Gene GFAP, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-205ENST00000585543 CCDC102BQ68D86 513 aa20.56■□□□□ 0.88
GFAP-205ENST00000585543 TBC1D22AQ8WUA7 517 aa20.56■□□□□ 0.88
GFAP-205ENST00000585543 KCNQ5Q9NR82 932 aa20.56■□□□□ 0.88
GFAP-205ENST00000585543 DENND2AQ9ULE3 1009 aa20.56■□□□□ 0.88
GFAP-205ENST00000585543 IQSEC3Q9UPP2 1182 aaPredicted RBP20.56■□□□□ 0.88
GFAP-205ENST00000585543 H7C1D1 291 aa20.55■□□□□ 0.88
GFAP-205ENST00000585543 PHKA1P46020 1223 aa20.55■□□□□ 0.88
GFAP-205ENST00000585543 DPF2Q92785 391 aa20.55■□□□□ 0.88
GFAP-205ENST00000585543 RRAGCQ9HB90 399 aa20.55■□□□□ 0.88
GFAP-205ENST00000585543 FAM205AQ6ZU69 1335 aa20.54■□□□□ 0.88
GFAP-205ENST00000585543 FKBP1AP62942 108 aaKnown RBP20.54■□□□□ 0.88
GFAP-205ENST00000585543 DACT2Q5SW24 774 aa20.54■□□□□ 0.88
GFAP-205ENST00000585543 OGFOD1Q8N543 542 aa20.54■□□□□ 0.88
GFAP-205ENST00000585543 WDR66Q8TBY9 1149 aa20.54■□□□□ 0.88
GFAP-205ENST00000585543 DBNDD2Q9BQY9 259 aa20.54■□□□□ 0.88
GFAP-205ENST00000585543 CCDC8Q9H0W5 538 aaPredicted RBP20.54■□□□□ 0.88
GFAP-205ENST00000585543 NMRK2Q9NPI5 230 aa20.54■□□□□ 0.88
GFAP-205ENST00000585543 GPRC5DQ9NZD1 345 aa20.54■□□□□ 0.88
GFAP-205ENST00000585543 HDAC9Q9UKV0 1011 aa20.54■□□□□ 0.88
GFAP-205ENST00000585543 ZBTB12Q9Y330 459 aaPredicted RBP20.54■□□□□ 0.88
GFAP-205ENST00000585543 MMP14P50281 582 aa20.53■□□□□ 0.88
GFAP-205ENST00000585543 EAF2Q96CJ1 260 aaPredicted RBP20.53■□□□□ 0.88
GFAP-205ENST00000585543 GPATCH3Q96I76 525 aa20.53■□□□□ 0.88
GFAP-205ENST00000585543 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.53■□□□□ 0.88
GFAP-205ENST00000585543 ZNF646O15015 1829 aaPredicted RBP20.53■□□□□ 0.88
GFAP-205ENST00000585543 SCNN1DP51172 638 aa20.52■□□□□ 0.88
GFAP-205ENST00000585543 MFSD14BQ5SR56 506 aa20.52■□□□□ 0.88
GFAP-205ENST00000585543 MICALL2Q8IY33 904 aa20.52■□□□□ 0.88
GFAP-205ENST00000585543 ZGPATQ8N5A5 531 aaKnown RBP20.52■□□□□ 0.88
GFAP-205ENST00000585543 CNOT7Q9UIV1 285 aaKnown RBP20.52■□□□□ 0.88
GFAP-205ENST00000585543 JAG2Q9Y219 1238 aa20.52■□□□□ 0.88
GFAP-205ENST00000585543 ZBTB22O15209 634 aa20.51■□□□□ 0.87
GFAP-205ENST00000585543 USP17L8P0C7I0 530 aa20.51■□□□□ 0.87
GFAP-205ENST00000585543 EPHX2P34913 555 aa20.51■□□□□ 0.87
GFAP-205ENST00000585543 PNMA8AQ86V59 439 aaPredicted RBP20.51■□□□□ 0.87
GFAP-205ENST00000585543 ADARB2Q9NS39 739 aaKnown RBP20.51■□□□□ 0.87
GFAP-205ENST00000585543 DBNLQ9UJU6 430 aaKnown RBP20.51■□□□□ 0.87
GFAP-205ENST00000585543 MAST3O60307 1309 aa20.51■□□□□ 0.87
GFAP-205ENST00000585543 PDS5AQ29RF7 1337 aaKnown RBP20.51■□□□□ 0.87
GFAP-205ENST00000585543 ARID4AP29374 1257 aaPredicted RBP20.5■□□□□ 0.87
GFAP-205ENST00000585543 ANKRD45Q5TZF3 282 aa20.5■□□□□ 0.87
GFAP-205ENST00000585543 SMARCA5O60264 1052 aaPredicted RBP20.49■□□□□ 0.87
GFAP-205ENST00000585543 RASGRF1Q13972 1273 aa20.49■□□□□ 0.87
GFAP-205ENST00000585543 EAPPQ56P03 285 aaPredicted RBP20.49■□□□□ 0.87
GFAP-205ENST00000585543 KIAA0825Q8IV33 1275 aa20.49■□□□□ 0.87
GFAP-205ENST00000585543 ZNF512BQ96KM6 892 aaPredicted RBP20.49■□□□□ 0.87
GFAP-205ENST00000585543 TAF1DQ9H5J8 278 aaPredicted RBP20.49■□□□□ 0.87
GFAP-205ENST00000585543 TLR7Q9NYK1 1049 aaKnown RBP20.49■□□□□ 0.87
GFAP-205ENST00000585543 SUGT1Q9Y2Z0 365 aa20.49■□□□□ 0.87
GFAP-205ENST00000585543 EPS15P42566 896 aa20.48■□□□□ 0.87
GFAP-205ENST00000585543 SPTY2D1Q68D10 685 aaPredicted RBP20.48■□□□□ 0.87
GFAP-205ENST00000585543 USP50Q70EL3 339 aaPredicted RBP20.48■□□□□ 0.87
GFAP-205ENST00000585543 SPATA5Q8NB90 893 aa20.48■□□□□ 0.87
GFAP-205ENST00000585543 MXD3Q9BW11 206 aa20.48■□□□□ 0.87
GFAP-205ENST00000585543 F8W031 263 aaPredicted RBP20.47■□□□□ 0.87
GFAP-205ENST00000585543 SMC5Q8IY18 1101 aa20.47■□□□□ 0.87
GFAP-205ENST00000585543 GMLQ99445 158 aa20.47■□□□□ 0.87
GFAP-205ENST00000585543 SALL1Q9NSC2 1324 aa20.47■□□□□ 0.87
GFAP-205ENST00000585543 COL1A1P02452 1464 aaPredicted RBP20.46■□□□□ 0.87
GFAP-205ENST00000585543 IGHDP01880 384 aa20.46■□□□□ 0.87
GFAP-205ENST00000585543 LDHBP07195 334 aaKnown RBP20.46■□□□□ 0.87
GFAP-205ENST00000585543 KIF4BQ2VIQ3 1234 aa20.46■□□□□ 0.87
GFAP-205ENST00000585543 HMG20BQ9P0W2 317 aa20.46■□□□□ 0.87
GFAP-205ENST00000585543 TTF2Q9UNY4 1162 aaKnown RBP20.46■□□□□ 0.87
GFAP-205ENST00000585543 CLEC11AQ9Y240 323 aa20.46■□□□□ 0.87
GFAP-205ENST00000585543 POTECB2RU33 542 aa20.45■□□□□ 0.86
GFAP-205ENST00000585543 MCAMP43121 646 aa20.45■□□□□ 0.86
GFAP-205ENST00000585543 ZNF280AP59817 542 aaPredicted RBP20.45■□□□□ 0.86
GFAP-205ENST00000585543 B4GALNT3Q6L9W6 998 aa20.45■□□□□ 0.86
GFAP-205ENST00000585543 CERS5Q8N5B7 392 aa20.45■□□□□ 0.86
GFAP-205ENST00000585543 MYOZ2Q9NPC6 264 aa20.45■□□□□ 0.86
GFAP-205ENST00000585543 ABCF2Q9UG63 623 aa20.45■□□□□ 0.86
GFAP-205ENST00000585543 KIF3CO14782 793 aa20.44■□□□□ 0.86
GFAP-205ENST00000585543 RBM5P52756 815 aaKnown RBP eCLIP20.44■□□□□ 0.86
GFAP-205ENST00000585543 TBC1D10BQ4KMP7 808 aaPredicted RBP20.44■□□□□ 0.86
GFAP-205ENST00000585543 RBM26Q5T8P6 1007 aaKnown RBP20.44■□□□□ 0.86
GFAP-205ENST00000585543 ERICH6BQ5W0A0 696 aa20.44■□□□□ 0.86
GFAP-205ENST00000585543 LDHDQ86WU2 507 aa20.44■□□□□ 0.86
GFAP-205ENST00000585543 DZIP1Q86YF9 867 aaKnown RBP20.44■□□□□ 0.86
GFAP-205ENST00000585543 SLF2Q8IX21 1173 aa20.44■□□□□ 0.86
GFAP-205ENST00000585543 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.44■□□□□ 0.86
GFAP-205ENST00000585543 AKAP11Q9UKA4 1901 aa20.43■□□□□ 0.86
GFAP-205ENST00000585543 ERC2O15083 957 aa20.43■□□□□ 0.86
GFAP-205ENST00000585543 DLGAP5Q15398 846 aa20.43■□□□□ 0.86
GFAP-205ENST00000585543 ERICH6Q7L0X2 663 aa20.43■□□□□ 0.86
GFAP-205ENST00000585543 SNRKQ9NRH2 765 aa20.43■□□□□ 0.86
GFAP-205ENST00000585543 ECHDC1Q9NTX5 307 aa20.43■□□□□ 0.86
GFAP-205ENST00000585543 LRP2BPQ9P2M1 347 aa20.43■□□□□ 0.86
GFAP-205ENST00000585543 MYO1BO43795 1136 aa20.42■□□□□ 0.86
GFAP-205ENST00000585543 TOMM70O94826 608 aa20.42■□□□□ 0.86
GFAP-205ENST00000585543 TTF1Q15361 905 aaPredicted RBP20.42■□□□□ 0.86
GFAP-205ENST00000585543 SAMD7Q7Z3H4 446 aa20.42■□□□□ 0.86
GFAP-205ENST00000585543 TEKT1Q969V4 418 aa20.42■□□□□ 0.86
GFAP-205ENST00000585543 CCDC136Q96JN2 1154 aa20.42■□□□□ 0.86
GFAP-205ENST00000585543 TTC41PQ6P2S7 1318 aa20.42■□□□□ 0.86
GFAP-205ENST00000585543 SHTN1A0MZ66 631 aa20.41■□□□□ 0.86
GFAP-205ENST00000585543 IGSF3O75054 1194 aa20.41■□□□□ 0.86
GFAP-205ENST00000585543 ATP5JP18859 108 aa20.41■□□□□ 0.86
GFAP-205ENST00000585543 HDLBPQ00341 1268 aaKnown RBP20.41■□□□□ 0.86
GFAP-205ENST00000585543 SCARF1Q14162 830 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms