RNA–Protein interactions for RNA: ENST00000585420.5

GCDH-203, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,730 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-203ENST00000585420 STRIP1Q5VSL9 837 aa20.5■□□□□ 0.87
GCDH-203ENST00000585420 FBXO33Q7Z6M2 555 aa20.5■□□□□ 0.87
GCDH-203ENST00000585420 DPF2Q92785 391 aa20.5■□□□□ 0.87
GCDH-203ENST00000585420 CNOT7Q9UIV1 285 aaKnown RBP20.5■□□□□ 0.87
GCDH-203ENST00000585420 SLC5A1P13866 664 aa20.49■□□□□ 0.87
GCDH-203ENST00000585420 ATP2B3Q16720 1220 aa20.49■□□□□ 0.87
GCDH-203ENST00000585420 EAPPQ56P03 285 aaPredicted RBP20.49■□□□□ 0.87
GCDH-203ENST00000585420 VPS37DQ86XT2 251 aa20.49■□□□□ 0.87
GCDH-203ENST00000585420 CLASRPQ8N2M8 674 aaKnown RBP20.49■□□□□ 0.87
GCDH-203ENST00000585420 RPS12P25398 132 aaKnown RBP20.48■□□□□ 0.87
GCDH-203ENST00000585420 TIMM10P62072 90 aa20.48■□□□□ 0.87
GCDH-203ENST00000585420 CAVIN4Q5BKX8 364 aa20.48■□□□□ 0.87
GCDH-203ENST00000585420 MICALL2Q8IY33 904 aa20.48■□□□□ 0.87
GCDH-203ENST00000585420 TDRD7Q8NHU6 1098 aaKnown RBP20.48■□□□□ 0.87
GCDH-203ENST00000585420 JAG2Q9Y219 1238 aa20.48■□□□□ 0.87
GCDH-203ENST00000585420 C1QTNF8P60827 252 aa20.47■□□□□ 0.87
GCDH-203ENST00000585420 GMLQ99445 158 aa20.47■□□□□ 0.87
GCDH-203ENST00000585420 IQSEC3Q9UPP2 1182 aaPredicted RBP20.47■□□□□ 0.87
GCDH-203ENST00000585420 PSME4Q14997 1843 aa20.47■□□□□ 0.87
GCDH-203ENST00000585420 AGBL3Q8NEM8 1001 aa20.47■□□□□ 0.87
GCDH-203ENST00000585420 RBM46Q8TBY0 533 aaKnown RBP20.47■□□□□ 0.87
GCDH-203ENST00000585420 ADARB2Q9NS39 739 aaKnown RBP20.47■□□□□ 0.87
GCDH-203ENST00000585420 AACSQ86V21 672 aa20.46■□□□□ 0.87
GCDH-203ENST00000585420 PNMA8AQ86V59 439 aaPredicted RBP20.46■□□□□ 0.87
GCDH-203ENST00000585420 OTUD7AQ8TE49 926 aaPredicted RBP20.46■□□□□ 0.87
GCDH-203ENST00000585420 ZNF646O15015 1829 aaPredicted RBP20.45■□□□□ 0.86
GCDH-203ENST00000585420 A0A1B0GUL7 405 aa20.45■□□□□ 0.86
GCDH-203ENST00000585420 H7C1D1 291 aa20.45■□□□□ 0.86
GCDH-203ENST00000585420 ADORA1P30542 326 aa20.45■□□□□ 0.86
GCDH-203ENST00000585420 SAMD7Q7Z3H4 446 aa20.45■□□□□ 0.86
GCDH-203ENST00000585420 AKAP2Q9Y2D5 859 aa20.45■□□□□ 0.86
GCDH-203ENST00000585420 EGFRP00533 1210 aa20.44■□□□□ 0.86
GCDH-203ENST00000585420 IFIT2P09913 472 aaKnown RBP20.44■□□□□ 0.86
GCDH-203ENST00000585420 USP50Q70EL3 339 aaPredicted RBP20.44■□□□□ 0.86
GCDH-203ENST00000585420 CERS5Q8N5B7 392 aa20.44■□□□□ 0.86
GCDH-203ENST00000585420 TRPM4Q8TD43 1214 aa20.44■□□□□ 0.86
GCDH-203ENST00000585420 ZNF609O15014 1411 aa20.44■□□□□ 0.86
GCDH-203ENST00000585420 HIRAP54198 1017 aaPredicted RBP20.44■□□□□ 0.86
GCDH-203ENST00000585420 TNNI3KQ59H18 835 aa20.44■□□□□ 0.86
GCDH-203ENST00000585420 EAF2Q96CJ1 260 aaPredicted RBP20.44■□□□□ 0.86
GCDH-203ENST00000585420 CLEC11AQ9Y240 323 aa20.44■□□□□ 0.86
GCDH-203ENST00000585420 FPGT-TNNI3KV9GXZ4 949 aa20.44■□□□□ 0.86
GCDH-203ENST00000585420 FRAT2O75474 233 aaPredicted RBP20.43■□□□□ 0.86
GCDH-203ENST00000585420 USP17L8P0C7I0 530 aa20.43■□□□□ 0.86
GCDH-203ENST00000585420 LDHDQ86WU2 507 aa20.43■□□□□ 0.86
GCDH-203ENST00000585420 SMC1BQ8NDV3 1235 aa20.43■□□□□ 0.86
GCDH-203ENST00000585420 XAGE2Q96GT9 111 aa20.43■□□□□ 0.86
GCDH-203ENST00000585420 NEUROD6Q96NK8 337 aa20.43■□□□□ 0.86
GCDH-203ENST00000585420 MYO3BQ8WXR4 1341 aa20.43■□□□□ 0.86
GCDH-203ENST00000585420 PHKA1P46020 1223 aa20.42■□□□□ 0.86
GCDH-203ENST00000585420 TBC1D10BQ4KMP7 808 aaPredicted RBP20.42■□□□□ 0.86
GCDH-203ENST00000585420 RBM26Q5T8P6 1007 aaKnown RBP20.42■□□□□ 0.86
GCDH-203ENST00000585420 KIAA0825Q8IV33 1275 aa20.42■□□□□ 0.86
GCDH-203ENST00000585420 PLEKHM2Q8IWE5 1019 aa20.42■□□□□ 0.86
GCDH-203ENST00000585420 FAM205AQ6ZU69 1335 aa20.42■□□□□ 0.86
GCDH-203ENST00000585420 MX1P20591 662 aa20.41■□□□□ 0.86
GCDH-203ENST00000585420 ZNF280AP59817 542 aaPredicted RBP20.41■□□□□ 0.86
GCDH-203ENST00000585420 CCDC8Q9H0W5 538 aaPredicted RBP20.41■□□□□ 0.86
GCDH-203ENST00000585420 GPR108Q9NPR9 543 aa20.41■□□□□ 0.86
GCDH-203ENST00000585420 ADAMTSL1Q8N6G6 1762 aa20.41■□□□□ 0.86
GCDH-203ENST00000585420 FSTL1Q12841 308 aa20.41■□□□□ 0.86
GCDH-203ENST00000585420 CHAF1AQ13111 956 aaPredicted RBP20.41■□□□□ 0.86
GCDH-203ENST00000585420 CCDC102BQ68D86 513 aa20.41■□□□□ 0.86
GCDH-203ENST00000585420 CHADLQ6NUI6 762 aa20.41■□□□□ 0.86
GCDH-203ENST00000585420 CEP350Q5VT06 3117 aa20.4■□□□□ 0.86
GCDH-203ENST00000585420 MFSD14BQ5SR56 506 aa20.4■□□□□ 0.86
GCDH-203ENST00000585420 TLR7Q9NYK1 1049 aaKnown RBP20.4■□□□□ 0.86
GCDH-203ENST00000585420 F8W031 263 aaPredicted RBP20.39■□□□□ 0.86
GCDH-203ENST00000585420 PDE1AP54750 535 aa20.39■□□□□ 0.86
GCDH-203ENST00000585420 FKBP1AP62942 108 aaKnown RBP20.39■□□□□ 0.86
GCDH-203ENST00000585420 TSHZ3Q63HK5 1081 aa20.39■□□□□ 0.86
GCDH-203ENST00000585420 MAP1SQ66K74 1059 aaPredicted RBP20.39■□□□□ 0.86
GCDH-203ENST00000585420 OGFOD1Q8N543 542 aa20.39■□□□□ 0.86
GCDH-203ENST00000585420 MYOZ2Q9NPC6 264 aa20.39■□□□□ 0.86
GCDH-203ENST00000585420 SALL3Q9BXA9 1300 aa20.39■□□□□ 0.85
GCDH-203ENST00000585420 KIF4BQ2VIQ3 1234 aa20.39■□□□□ 0.85
GCDH-203ENST00000585420 GPATCH3Q96I76 525 aa20.39■□□□□ 0.85
GCDH-203ENST00000585420 ARAP2Q8WZ64 1704 aa20.38■□□□□ 0.85
GCDH-203ENST00000585420 COL1A1P02452 1464 aaPredicted RBP20.38■□□□□ 0.85
GCDH-203ENST00000585420 GNL3LQ9NVN8 582 aaKnown RBP20.38■□□□□ 0.85
GCDH-203ENST00000585420 DBNLQ9UJU6 430 aaKnown RBP20.38■□□□□ 0.85
GCDH-203ENST00000585420 GRIK5Q16478 980 aa20.37■□□□□ 0.85
GCDH-203ENST00000585420 DBNDD2Q9BQY9 259 aa20.37■□□□□ 0.85
GCDH-203ENST00000585420 GORABQ5T7V8 394 aa20.36■□□□□ 0.85
GCDH-203ENST00000585420 CNTROBQ8N137 903 aa20.36■□□□□ 0.85
GCDH-203ENST00000585420 OSBPL3Q9H4L5 887 aa20.36■□□□□ 0.85
GCDH-203ENST00000585420 ECHDC1Q9NTX5 307 aa20.36■□□□□ 0.85
GCDH-203ENST00000585420 STAP2Q9UGK3 403 aa20.36■□□□□ 0.85
GCDH-203ENST00000585420 PGAP2Q9UHJ9 254 aa20.36■□□□□ 0.85
GCDH-203ENST00000585420 ASTN2O75129 1339 aaPredicted RBP20.36■□□□□ 0.85
GCDH-203ENST00000585420 ITGBL1O95965 494 aaPredicted RBP20.36■□□□□ 0.85
GCDH-203ENST00000585420 ZC3H15Q8WU90 426 aaKnown RBP20.36■□□□□ 0.85
GCDH-203ENST00000585420 TBC1D22AQ8WUA7 517 aa20.36■□□□□ 0.85
GCDH-203ENST00000585420 HDAC9Q9UKV0 1011 aa20.36■□□□□ 0.85
GCDH-203ENST00000585420 TTC41PQ6P2S7 1318 aa20.35■□□□□ 0.85
GCDH-203ENST00000585420 RASGRF1Q13972 1273 aa20.35■□□□□ 0.85
GCDH-203ENST00000585420 DENND2AQ9ULE3 1009 aa20.35■□□□□ 0.85
GCDH-203ENST00000585420 AOX1Q06278 1338 aa20.34■□□□□ 0.85
GCDH-203ENST00000585420 SCARF1Q14162 830 aa20.34■□□□□ 0.85
GCDH-203ENST00000585420 NBPF9Q3BBW0 867 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms