RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 CHAF1AQ13111 956 aaPredicted RBP17.84■□□□□ 0.45
SCAMP4-209ENST00000585335 TBC1D22AQ8WUA7 517 aa17.84■□□□□ 0.45
SCAMP4-209ENST00000585335 ZNF512BQ96KM6 892 aaPredicted RBP17.84■□□□□ 0.45
SCAMP4-209ENST00000585335 PDS5AQ29RF7 1337 aaKnown RBP17.83■□□□□ 0.44
SCAMP4-209ENST00000585335 FAM205AQ6ZU69 1335 aa17.83■□□□□ 0.44
SCAMP4-209ENST00000585335 VIL1P09327 827 aaKnown RBP17.83■□□□□ 0.44
SCAMP4-209ENST00000585335 RPS12P25398 132 aaKnown RBP17.83■□□□□ 0.44
SCAMP4-209ENST00000585335 FKBP1AP62942 108 aaKnown RBP17.83■□□□□ 0.44
SCAMP4-209ENST00000585335 CHD1LQ86WJ1 897 aa17.83■□□□□ 0.44
SCAMP4-209ENST00000585335 WDR66Q8TBY9 1149 aa17.83■□□□□ 0.44
SCAMP4-209ENST00000585335 MYH13Q9UKX3 1938 aa17.82■□□□□ 0.44
SCAMP4-209ENST00000585335 YY1P25490 414 aa17.82■□□□□ 0.44
SCAMP4-209ENST00000585335 LMOD1P29536 600 aaPredicted RBP17.82■□□□□ 0.44
SCAMP4-209ENST00000585335 RSBN1LQ6PCB5 846 aaPredicted RBP17.82■□□□□ 0.44
SCAMP4-209ENST00000585335 ZGPATQ8N5A5 531 aaKnown RBP17.82■□□□□ 0.44
SCAMP4-209ENST00000585335 AGBL3Q8NEM8 1001 aa17.82■□□□□ 0.44
SCAMP4-209ENST00000585335 LNPKQ9C0E8 428 aa17.82■□□□□ 0.44
SCAMP4-209ENST00000585335 KCNQ5Q9NR82 932 aa17.82■□□□□ 0.44
SCAMP4-209ENST00000585335 PSME4Q14997 1843 aa17.82■□□□□ 0.44
SCAMP4-209ENST00000585335 DDNO94850 711 aaPredicted RBP17.81■□□□□ 0.44
SCAMP4-209ENST00000585335 RASGRF1Q13972 1273 aa17.81■□□□□ 0.44
SCAMP4-209ENST00000585335 DACT2Q5SW24 774 aa17.81■□□□□ 0.44
SCAMP4-209ENST00000585335 SPATA5Q8NB90 893 aa17.81■□□□□ 0.44
SCAMP4-209ENST00000585335 ECHDC1Q9NTX5 307 aa17.81■□□□□ 0.44
SCAMP4-209ENST00000585335 SCN9AQ15858 1988 aa17.8■□□□□ 0.44
SCAMP4-209ENST00000585335 TTC41PQ6P2S7 1318 aa17.8■□□□□ 0.44
SCAMP4-209ENST00000585335 ERC2O15083 957 aa17.8■□□□□ 0.44
SCAMP4-209ENST00000585335 GMPSP49915 693 aaPredicted RBP17.8■□□□□ 0.44
SCAMP4-209ENST00000585335 MFSD14BQ5SR56 506 aa17.8■□□□□ 0.44
SCAMP4-209ENST00000585335 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.8■□□□□ 0.44
SCAMP4-209ENST00000585335 DPF2Q92785 391 aa17.8■□□□□ 0.44
SCAMP4-209ENST00000585335 JAG2Q9Y219 1238 aa17.8■□□□□ 0.44
SCAMP4-209ENST00000585335 IQCA1LA6NCM1 817 aa17.79■□□□□ 0.44
SCAMP4-209ENST00000585335 ATP5JP18859 108 aa17.79■□□□□ 0.44
SCAMP4-209ENST00000585335 MX1P20591 662 aa17.79■□□□□ 0.44
SCAMP4-209ENST00000585335 MMP14P50281 582 aa17.79■□□□□ 0.44
SCAMP4-209ENST00000585335 SPTY2D1Q68D10 685 aaPredicted RBP17.79■□□□□ 0.44
SCAMP4-209ENST00000585335 OGFOD1Q8N543 542 aa17.79■□□□□ 0.44
SCAMP4-209ENST00000585335 L3MBTL3Q96JM7 780 aaPredicted RBP17.79■□□□□ 0.44
SCAMP4-209ENST00000585335 HMG20BQ9P0W2 317 aa17.79■□□□□ 0.44
SCAMP4-209ENST00000585335 HDAC9Q9UKV0 1011 aa17.79■□□□□ 0.44
SCAMP4-209ENST00000585335 SUGT1Q9Y2Z0 365 aa17.79■□□□□ 0.44
SCAMP4-209ENST00000585335 MAST3O60307 1309 aa17.78■□□□□ 0.44
SCAMP4-209ENST00000585335 SALL1Q9NSC2 1324 aa17.78■□□□□ 0.44
SCAMP4-209ENST00000585335 MCAMP43121 646 aa17.78■□□□□ 0.44
SCAMP4-209ENST00000585335 ZNF526Q8TF50 670 aaPredicted RBP17.78■□□□□ 0.44
SCAMP4-209ENST00000585335 ZBTB12Q9Y330 459 aaPredicted RBP17.78■□□□□ 0.44
SCAMP4-209ENST00000585335 COL1A1P02452 1464 aaPredicted RBP17.77■□□□□ 0.44
SCAMP4-209ENST00000585335 UTRNP46939 3433 aa17.77■□□□□ 0.44
SCAMP4-209ENST00000585335 H7C1D1 291 aa17.77■□□□□ 0.44
SCAMP4-209ENST00000585335 USP17L8P0C7I0 530 aa17.77■□□□□ 0.44
SCAMP4-209ENST00000585335 TTF1Q15361 905 aaPredicted RBP17.77■□□□□ 0.44
SCAMP4-209ENST00000585335 C16orf71Q8IYS4 520 aaPredicted RBP17.77■□□□□ 0.44
SCAMP4-209ENST00000585335 HACL1Q9UJ83 578 aa17.77■□□□□ 0.44
SCAMP4-209ENST00000585335 WDR90Q96KV7 1748 aa17.76■□□□□ 0.43
SCAMP4-209ENST00000585335 GLRX3O76003 335 aaKnown RBP17.76■□□□□ 0.43
SCAMP4-209ENST00000585335 LDHBP07195 334 aaKnown RBP17.76■□□□□ 0.43
SCAMP4-209ENST00000585335 SCARF1Q14162 830 aa17.76■□□□□ 0.43
SCAMP4-209ENST00000585335 DNAJC2Q99543 621 aaKnown RBP17.76■□□□□ 0.43
SCAMP4-209ENST00000585335 GPBP1L1Q9HC44 474 aaPredicted RBP17.76■□□□□ 0.43
SCAMP4-209ENST00000585335 SNRKQ9NRH2 765 aa17.76■□□□□ 0.43
SCAMP4-209ENST00000585335 GPRC5DQ9NZD1 345 aa17.76■□□□□ 0.43
SCAMP4-209ENST00000585335 ABCF2Q9UG63 623 aa17.76■□□□□ 0.43
SCAMP4-209ENST00000585335 CNOT7Q9UIV1 285 aaKnown RBP17.76■□□□□ 0.43
SCAMP4-209ENST00000585335 AOX1Q06278 1338 aa17.75■□□□□ 0.43
SCAMP4-209ENST00000585335 IGSF3O75054 1194 aa17.75■□□□□ 0.43
SCAMP4-209ENST00000585335 VEGFAP15692 232 aaPredicted RBP17.75■□□□□ 0.43
SCAMP4-209ENST00000585335 ZAP70P43403 619 aa17.75■□□□□ 0.43
SCAMP4-209ENST00000585335 SCNN1DP51172 638 aa17.75■□□□□ 0.43
SCAMP4-209ENST00000585335 PI16Q6UXB8 463 aa17.75■□□□□ 0.43
SCAMP4-209ENST00000585335 ERICH6Q7L0X2 663 aa17.75■□□□□ 0.43
SCAMP4-209ENST00000585335 DZIP1Q86YF9 867 aaKnown RBP17.75■□□□□ 0.43
SCAMP4-209ENST00000585335 KIAA0825Q8IV33 1275 aa17.75■□□□□ 0.43
SCAMP4-209ENST00000585335 MICALL2Q8IY33 904 aa17.75■□□□□ 0.43
SCAMP4-209ENST00000585335 CERS5Q8N5B7 392 aa17.75■□□□□ 0.43
SCAMP4-209ENST00000585335 OTUD7AQ8TE49 926 aaPredicted RBP17.75■□□□□ 0.43
SCAMP4-209ENST00000585335 GMLQ99445 158 aa17.75■□□□□ 0.43
SCAMP4-209ENST00000585335 MXD3Q9BW11 206 aa17.75■□□□□ 0.43
SCAMP4-209ENST00000585335 BOLA2Q9H3K6 86 aa17.75■□□□□ 0.43
SCAMP4-209ENST00000585335 LRP2BPQ9P2M1 347 aa17.75■□□□□ 0.43
SCAMP4-209ENST00000585335 STAP2Q9UGK3 403 aa17.75■□□□□ 0.43
SCAMP4-209ENST00000585335 F8W031 263 aaPredicted RBP17.74■□□□□ 0.43
SCAMP4-209ENST00000585335 PDE1AP54750 535 aa17.74■□□□□ 0.43
SCAMP4-209ENST00000585335 SLF2Q8IX21 1173 aa17.74■□□□□ 0.43
SCAMP4-209ENST00000585335 HAUS7Q99871 368 aa17.74■□□□□ 0.43
SCAMP4-209ENST00000585335 TTF2Q9UNY4 1162 aaKnown RBP17.74■□□□□ 0.43
SCAMP4-209ENST00000585335 SALL3Q9BXA9 1300 aa17.73■□□□□ 0.43
SCAMP4-209ENST00000585335 ZNF646O15015 1829 aaPredicted RBP17.73■□□□□ 0.43
SCAMP4-209ENST00000585335 SCN4AP35499 1836 aa17.73■□□□□ 0.43
SCAMP4-209ENST00000585335 ADARB2Q9NS39 739 aaKnown RBP17.73■□□□□ 0.43
SCAMP4-209ENST00000585335 PAG1Q9NWQ8 432 aa17.73■□□□□ 0.43
SCAMP4-209ENST00000585335 RAI14Q9P0K7 980 aa17.73■□□□□ 0.43
SCAMP4-209ENST00000585335 GOLIM4O00461 696 aa17.72■□□□□ 0.43
SCAMP4-209ENST00000585335 CYP2E1P05181 493 aaPredicted RBP17.72■□□□□ 0.43
SCAMP4-209ENST00000585335 EPHX2P34913 555 aa17.72■□□□□ 0.43
SCAMP4-209ENST00000585335 ZNF280AP59817 542 aaPredicted RBP17.72■□□□□ 0.43
SCAMP4-209ENST00000585335 GSTO1P78417 241 aa17.72■□□□□ 0.43
SCAMP4-209ENST00000585335 MAP3K12Q12852 859 aa17.72■□□□□ 0.43
SCAMP4-209ENST00000585335 TSHZ3Q63HK5 1081 aa17.72■□□□□ 0.43
SCAMP4-209ENST00000585335 RRAGCQ9HB90 399 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms