RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 CXCL9Q07325 125 aa17.02■□□□□ 0.32
TRAF4-215ENST00000584944 CCDC158Q5M9N0 1113 aa17.02■□□□□ 0.32
TRAF4-215ENST00000584944 AACSQ86V21 672 aa17.02■□□□□ 0.32
TRAF4-215ENST00000584944 RHPN1Q8TCX5 695 aa17.02■□□□□ 0.32
TRAF4-215ENST00000584944 WBP1LQ9NX94 342 aa17.02■□□□□ 0.32
TRAF4-215ENST00000584944 USP17L3A6NCW0 530 aa17.01■□□□□ 0.31
TRAF4-215ENST00000584944 USP17L4A6NCW7 530 aa17.01■□□□□ 0.31
TRAF4-215ENST00000584944 SASH1O94885 1247 aa17.01■□□□□ 0.31
TRAF4-215ENST00000584944 TIMM10P62072 90 aa17.01■□□□□ 0.31
TRAF4-215ENST00000584944 FMR1Q06787 632 aaKnown RBP eCLIP17.01■□□□□ 0.31
TRAF4-215ENST00000584944 HDAC1Q13547 482 aaPredicted RBP17.01■□□□□ 0.31
TRAF4-215ENST00000584944 TNNI3KQ59H18 835 aa17.01■□□□□ 0.31
TRAF4-215ENST00000584944 USP17L1Q7RTZ2 530 aa17.01■□□□□ 0.31
TRAF4-215ENST00000584944 TXNRD3Q86VQ6 643 aa17.01■□□□□ 0.31
TRAF4-215ENST00000584944 GCC1Q96CN9 775 aa17.01■□□□□ 0.31
TRAF4-215ENST00000584944 CD209Q9NNX6 404 aa17.01■□□□□ 0.31
TRAF4-215ENST00000584944 IL1RAPL2Q9NP60 686 aa17.01■□□□□ 0.31
TRAF4-215ENST00000584944 GPR108Q9NPR9 543 aa17.01■□□□□ 0.31
TRAF4-215ENST00000584944 PRDM10Q9NQV6 1147 aa17.01■□□□□ 0.31
TRAF4-215ENST00000584944 GPRC5DQ9NZD1 345 aa17.01■□□□□ 0.31
TRAF4-215ENST00000584944 FPGT-TNNI3KV9GXZ4 949 aa17.01■□□□□ 0.31
TRAF4-215ENST00000584944 BCAMP50895 628 aa17■□□□□ 0.31
TRAF4-215ENST00000584944 TTC39AQ5SRH9 613 aa17■□□□□ 0.31
TRAF4-215ENST00000584944 XAGE2Q96GT9 111 aa17■□□□□ 0.31
TRAF4-215ENST00000584944 GPATCH3Q96I76 525 aa17■□□□□ 0.31
TRAF4-215ENST00000584944 FAM84BQ96KN1 310 aaPredicted RBP17■□□□□ 0.31
TRAF4-215ENST00000584944 DCTPP1Q9H773 170 aa17■□□□□ 0.31
TRAF4-215ENST00000584944 ADARB2Q9NS39 739 aaKnown RBP17■□□□□ 0.31
TRAF4-215ENST00000584944 FGFR2P21802 821 aa16.99■□□□□ 0.31
TRAF4-215ENST00000584944 CTCFP49711 727 aaPredicted RBP16.99■□□□□ 0.31
TRAF4-215ENST00000584944 GTF2IP78347 998 aa16.99■□□□□ 0.31
TRAF4-215ENST00000584944 CHAF1AQ13111 956 aaPredicted RBP16.99■□□□□ 0.31
TRAF4-215ENST00000584944 TTLL5Q6EMB2 1281 aa16.99■□□□□ 0.31
TRAF4-215ENST00000584944 AIDAQ96BJ3 306 aa16.99■□□□□ 0.31
TRAF4-215ENST00000584944 ABT1Q9ULW3 272 aaKnown RBP16.99■□□□□ 0.31
TRAF4-215ENST00000584944 IQSEC3Q9UPP2 1182 aaPredicted RBP16.99■□□□□ 0.31
TRAF4-215ENST00000584944 WDR33Q9C0J8 1336 aaKnown RBP16.98■□□□□ 0.31
TRAF4-215ENST00000584944 CST9Q5W186 159 aa16.98■□□□□ 0.31
TRAF4-215ENST00000584944 TRPM7Q96QT4 1865 aa16.98■□□□□ 0.31
TRAF4-215ENST00000584944 ZNF609O15014 1411 aa16.97■□□□□ 0.31
TRAF4-215ENST00000584944 TRAF5O00463 557 aa16.97■□□□□ 0.31
TRAF4-215ENST00000584944 PSMD14O00487 310 aa16.97■□□□□ 0.31
TRAF4-215ENST00000584944 UQCRFS1P1P0C7P4 283 aa16.97■□□□□ 0.31
TRAF4-215ENST00000584944 IL1R1P14778 569 aa16.97■□□□□ 0.31
TRAF4-215ENST00000584944 RPS12P25398 132 aaKnown RBP16.97■□□□□ 0.31
TRAF4-215ENST00000584944 ADORA1P30542 326 aa16.97■□□□□ 0.31
TRAF4-215ENST00000584944 GMPSP49915 693 aaPredicted RBP16.97■□□□□ 0.31
TRAF4-215ENST00000584944 ANKRD45Q5TZF3 282 aa16.97■□□□□ 0.31
TRAF4-215ENST00000584944 STRIP1Q5VSL9 837 aa16.97■□□□□ 0.31
TRAF4-215ENST00000584944 CCDC102BQ68D86 513 aa16.97■□□□□ 0.31
TRAF4-215ENST00000584944 FBXO33Q7Z6M2 555 aa16.97■□□□□ 0.31
TRAF4-215ENST00000584944 OGFOD1Q8N543 542 aa16.97■□□□□ 0.31
TRAF4-215ENST00000584944 CCDC8Q9H0W5 538 aaPredicted RBP16.97■□□□□ 0.31
TRAF4-215ENST00000584944 DENND2AQ9ULE3 1009 aa16.97■□□□□ 0.31
TRAF4-215ENST00000584944 MYO3BQ8WXR4 1341 aa16.96■□□□□ 0.31
TRAF4-215ENST00000584944 YDJCA8MPS7 323 aa16.96■□□□□ 0.31
TRAF4-215ENST00000584944 SEMA3EO15041 775 aa16.96■□□□□ 0.31
TRAF4-215ENST00000584944 TBC1D22AQ8WUA7 517 aa16.96■□□□□ 0.31
TRAF4-215ENST00000584944 PGAP2Q9UHJ9 254 aa16.96■□□□□ 0.31
TRAF4-215ENST00000584944 JAG2Q9Y219 1238 aa16.96■□□□□ 0.31
TRAF4-215ENST00000584944 H7C1D1 291 aa16.95■□□□□ 0.3
TRAF4-215ENST00000584944 PHKA1P46020 1223 aa16.95■□□□□ 0.3
TRAF4-215ENST00000584944 LBX1P52954 281 aa16.95■□□□□ 0.3
TRAF4-215ENST00000584944 MAP2K1Q02750 393 aaPredicted RBP16.95■□□□□ 0.3
TRAF4-215ENST00000584944 B4GALNT3Q6L9W6 998 aa16.95■□□□□ 0.3
TRAF4-215ENST00000584944 RSBN1LQ6PCB5 846 aaPredicted RBP16.95■□□□□ 0.3
TRAF4-215ENST00000584944 TDRD7Q8NHU6 1098 aaKnown RBP16.95■□□□□ 0.3
TRAF4-215ENST00000584944 WDR66Q8TBY9 1149 aa16.95■□□□□ 0.3
TRAF4-215ENST00000584944 EAF2Q96CJ1 260 aaPredicted RBP16.95■□□□□ 0.3
TRAF4-215ENST00000584944 CCDC136Q96JN2 1154 aa16.95■□□□□ 0.3
TRAF4-215ENST00000584944 DBNDD2Q9BQY9 259 aa16.95■□□□□ 0.3
TRAF4-215ENST00000584944 KCNQ5Q9NR82 932 aa16.95■□□□□ 0.3
TRAF4-215ENST00000584944 HDAC9Q9UKV0 1011 aa16.95■□□□□ 0.3
TRAF4-215ENST00000584944 A0A1B0GUL6 1792 aa16.94■□□□□ 0.3
TRAF4-215ENST00000584944 SMARCA5O60264 1052 aaPredicted RBP16.94■□□□□ 0.3
TRAF4-215ENST00000584944 HIRAP54198 1017 aaPredicted RBP16.94■□□□□ 0.3
TRAF4-215ENST00000584944 MFSD14BQ5SR56 506 aa16.94■□□□□ 0.3
TRAF4-215ENST00000584944 AGBL3Q8NEM8 1001 aa16.94■□□□□ 0.3
TRAF4-215ENST00000584944 CAPNS2Q96L46 248 aa16.94■□□□□ 0.3
TRAF4-215ENST00000584944 TLL2Q9Y6L7 1015 aa16.94■□□□□ 0.3
TRAF4-215ENST00000584944 VIL1P09327 827 aaKnown RBP16.93■□□□□ 0.3
TRAF4-215ENST00000584944 HSPA8P11142 646 aaKnown RBP16.93■□□□□ 0.3
TRAF4-215ENST00000584944 ZGPATQ8N5A5 531 aaKnown RBP16.93■□□□□ 0.3
TRAF4-215ENST00000584944 ZC3H15Q8WU90 426 aaKnown RBP16.93■□□□□ 0.3
TRAF4-215ENST00000584944 CNOT7Q9UIV1 285 aaKnown RBP16.93■□□□□ 0.3
TRAF4-215ENST00000584944 ZBTB12Q9Y330 459 aaPredicted RBP16.93■□□□□ 0.3
TRAF4-215ENST00000584944 IRS2Q9Y4H2 1338 aa16.93■□□□□ 0.3
TRAF4-215ENST00000584944 USP17L8P0C7I0 530 aa16.92■□□□□ 0.3
TRAF4-215ENST00000584944 ECE1P42892 770 aa16.92■□□□□ 0.3
TRAF4-215ENST00000584944 SPTY2D1Q68D10 685 aaPredicted RBP16.92■□□□□ 0.3
TRAF4-215ENST00000584944 CYP4F22Q6NT55 531 aa16.92■□□□□ 0.3
TRAF4-215ENST00000584944 TRPM4Q8TD43 1214 aa16.92■□□□□ 0.3
TRAF4-215ENST00000584944 GLIS2Q9BZE0 524 aaPredicted RBP16.92■□□□□ 0.3
TRAF4-215ENST00000584944 DBNLQ9UJU6 430 aaKnown RBP16.92■□□□□ 0.3
TRAF4-215ENST00000584944 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.92■□□□□ 0.3
TRAF4-215ENST00000584944 THSD7BQ9C0I4 1608 aa16.92■□□□□ 0.3
TRAF4-215ENST00000584944 SHTN1A0MZ66 631 aa16.91■□□□□ 0.3
TRAF4-215ENST00000584944 F8W031 263 aaPredicted RBP16.91■□□□□ 0.3
TRAF4-215ENST00000584944 CELF2O95319 508 aaKnown RBP16.91■□□□□ 0.3
TRAF4-215ENST00000584944 IGHDP01880 384 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms