RNA–Protein interactions for RNA: ENST00000584095.1

TTC39C-208, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 553 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-208ENST00000584095 SOX13Q9UN79 622 aa8.89□□□□□ -0.99
TTC39C-208ENST00000584095 TRIM33Q9UPN9 1127 aa8.89□□□□□ -0.99
TTC39C-208ENST00000584095 TLR6Q9Y2C9 796 aa8.89□□□□□ -0.99
TTC39C-208ENST00000584095 NEURL1BA8MQ27 555 aa8.88□□□□□ -0.99
TTC39C-208ENST00000584095 H3BM21 787 aa8.88□□□□□ -0.99
TTC39C-208ENST00000584095 RLBP1P12271 317 aa8.88□□□□□ -0.99
TTC39C-208ENST00000584095 EIF4A3P38919 411 aaKnown RBP8.88□□□□□ -0.99
TTC39C-208ENST00000584095 ELMSAN1Q6PJG2 1045 aa8.88□□□□□ -0.99
TTC39C-208ENST00000584095 KIAA0825Q8IV33 1275 aa8.88□□□□□ -0.99
TTC39C-208ENST00000584095 CLEC4MQ9H2X3 399 aaPredicted RBP8.88□□□□□ -0.99
TTC39C-208ENST00000584095 MAP2K3P46734 347 aa8.87□□□□□ -0.99
TTC39C-208ENST00000584095 TTBK2Q6IQ55 1244 aa8.87□□□□□ -0.99
TTC39C-208ENST00000584095 VN1R5Q7Z5H4 357 aa8.87□□□□□ -0.99
TTC39C-208ENST00000584095 MICALL1Q8N3F8 863 aa8.87□□□□□ -0.99
TTC39C-208ENST00000584095 ADAM19Q9H013 955 aa8.87□□□□□ -0.99
TTC39C-208ENST00000584095 FRRS1LQ9P0K9 344 aa8.87□□□□□ -0.99
TTC39C-208ENST00000584095 GGA1Q9UJY5 639 aa8.87□□□□□ -0.99
TTC39C-208ENST00000584095 SHROOM4Q9ULL8 1493 aa8.87□□□□□ -0.99
TTC39C-208ENST00000584095 FGRP09769 529 aa8.86□□□□□ -0.99
TTC39C-208ENST00000584095 PTPRAP18433 802 aa8.86□□□□□ -0.99
TTC39C-208ENST00000584095 ATP2B1P20020 1258 aa8.86□□□□□ -0.99
TTC39C-208ENST00000584095 GARTP22102 1010 aa8.86□□□□□ -0.99
TTC39C-208ENST00000584095 ZNF157P51786 506 aaPredicted RBP8.86□□□□□ -0.99
TTC39C-208ENST00000584095 PCDH1Q08174 1060 aa8.86□□□□□ -0.99
TTC39C-208ENST00000584095 RNFT1Q5M7Z0 435 aa8.86□□□□□ -0.99
TTC39C-208ENST00000584095 MCF2L2Q86YR7 1114 aa8.86□□□□□ -0.99
TTC39C-208ENST00000584095 RASGRP4Q8TDF6 673 aa8.86□□□□□ -0.99
TTC39C-208ENST00000584095 DHX38Q92620 1227 aaKnown RBP8.86□□□□□ -0.99
TTC39C-208ENST00000584095 LACRTQ9GZZ8 138 aa8.86□□□□□ -0.99
TTC39C-208ENST00000584095 KCNQ5Q9NR82 932 aa8.86□□□□□ -0.99
TTC39C-208ENST00000584095 TMEM39AQ9NV64 488 aa8.86□□□□□ -0.99
TTC39C-208ENST00000584095 IGF1RP08069 1367 aa8.86□□□□□ -0.99
TTC39C-208ENST00000584095 ELOA3CA0A087WX78 387 aaPredicted RBP8.85□□□□□ -0.99
TTC39C-208ENST00000584095 ELOA3DA6NLF2 546 aaPredicted RBP8.85□□□□□ -0.99
TTC39C-208ENST00000584095 B3GALT4O96024 378 aa8.85□□□□□ -0.99
TTC39C-208ENST00000584095 PF4P02776 101 aa8.85□□□□□ -0.99
TTC39C-208ENST00000584095 VSIG8P0DPA2 414 aa8.85□□□□□ -0.99
TTC39C-208ENST00000584095 ATF4P18848 351 aaPredicted RBP8.85□□□□□ -0.99
TTC39C-208ENST00000584095 TFE3P19532 575 aaPredicted RBP8.85□□□□□ -0.99
TTC39C-208ENST00000584095 FAM160A1Q05DH4 1040 aa8.85□□□□□ -0.99
TTC39C-208ENST00000584095 ZNF423Q2M1K9 1284 aa8.85□□□□□ -0.99
TTC39C-208ENST00000584095 ELOA3BQ3SY89 546 aa8.85□□□□□ -0.99
TTC39C-208ENST00000584095 RASIP1Q5U651 963 aa8.85□□□□□ -0.99
TTC39C-208ENST00000584095 PCNX4Q63HM2 1172 aa8.85□□□□□ -0.99
TTC39C-208ENST00000584095 PSAPL1Q6NUJ1 521 aa8.85□□□□□ -0.99
TTC39C-208ENST00000584095 FBXL19Q6PCT2 694 aa8.85□□□□□ -0.99
TTC39C-208ENST00000584095 AGMOQ6ZNB7 445 aa8.85□□□□□ -0.99
TTC39C-208ENST00000584095 VPS37DQ86XT2 251 aa8.85□□□□□ -0.99
TTC39C-208ENST00000584095 NPAS3Q8IXF0 933 aa8.85□□□□□ -0.99
TTC39C-208ENST00000584095 ELOA3Q8NG57 546 aa8.85□□□□□ -0.99
TTC39C-208ENST00000584095 ZNF296Q8WUU4 475 aaPredicted RBP8.85□□□□□ -0.99
TTC39C-208ENST00000584095 EAF1Q96JC9 268 aaPredicted RBP8.85□□□□□ -0.99
TTC39C-208ENST00000584095 SH2B1Q9NRF2 756 aaPredicted RBP8.85□□□□□ -0.99
TTC39C-208ENST00000584095 NSFL1CQ9UNZ2 370 aaKnown RBP8.85□□□□□ -0.99
TTC39C-208ENST00000584095 LMNB2Q03252 620 aa8.84□□□□□ -0.99
TTC39C-208ENST00000584095 COL25A1Q9BXS0 654 aaPredicted RBP8.84□□□□□ -0.99
TTC39C-208ENST00000584095 ESRRAP11474 423 aaPredicted RBP8.83□□□□□ -1
TTC39C-208ENST00000584095 GTF2F1P35269 517 aaKnown RBP eCLIP8.83□□□□□ -1
TTC39C-208ENST00000584095 RPS26P62854 115 aaKnown RBP8.83□□□□□ -1
TTC39C-208ENST00000584095 CAMK2GQ13555 558 aaPredicted RBP8.83□□□□□ -1
TTC39C-208ENST00000584095 SLCO4C1Q6ZQN7 724 aa8.83□□□□□ -1
TTC39C-208ENST00000584095 TTC9Q92623 222 aa8.83□□□□□ -1
TTC39C-208ENST00000584095 ARMC5Q96C12 935 aa8.83□□□□□ -1
TTC39C-208ENST00000584095 DNAJC2Q99543 621 aaKnown RBP8.83□□□□□ -1
TTC39C-208ENST00000584095 STARD13Q9Y3M8 1113 aa8.83□□□□□ -1
TTC39C-208ENST00000584095 SUPT16HQ9Y5B9 1047 aaKnown RBP8.83□□□□□ -1
TTC39C-208ENST00000584095 GREM1O60565 184 aa8.82□□□□□ -1
TTC39C-208ENST00000584095 EPHA1P21709 976 aa8.82□□□□□ -1
TTC39C-208ENST00000584095 PPP2R3AQ06190 1150 aa8.82□□□□□ -1
TTC39C-208ENST00000584095 SNAP47Q5SQN1 464 aa8.82□□□□□ -1
TTC39C-208ENST00000584095 GDF6Q6KF10 455 aaPredicted RBP8.82□□□□□ -1
TTC39C-208ENST00000584095 STK35Q8TDR2 534 aa8.82□□□□□ -1
TTC39C-208ENST00000584095 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.82□□□□□ -1
TTC39C-208ENST00000584095 ERBB4Q15303 1308 aa8.81□□□□□ -1
TTC39C-208ENST00000584095 BMP6P22004 513 aa8.81□□□□□ -1
TTC39C-208ENST00000584095 NME2P22392 152 aa8.81□□□□□ -1
TTC39C-208ENST00000584095 CDC27P30260 824 aa8.81□□□□□ -1
TTC39C-208ENST00000584095 GRIK5Q16478 980 aa8.81□□□□□ -1
TTC39C-208ENST00000584095 GOLGA6L1Q8N7Z2 621 aa8.81□□□□□ -1
TTC39C-208ENST00000584095 GOLM1Q8NBJ4 401 aa8.81□□□□□ -1
TTC39C-208ENST00000584095 NUDT8Q8WV74 236 aa8.81□□□□□ -1
TTC39C-208ENST00000584095 NT5C1AQ9BXI3 368 aa8.81□□□□□ -1
TTC39C-208ENST00000584095 UBP1Q9NZI7 540 aa8.81□□□□□ -1
TTC39C-208ENST00000584095 PCDHB5Q9Y5E4 795 aa8.81□□□□□ -1
TTC39C-208ENST00000584095 RGS9O75916 674 aaPredicted RBP8.8□□□□□ -1
TTC39C-208ENST00000584095 CRKP46108 304 aa8.8□□□□□ -1
TTC39C-208ENST00000584095 KRT76Q01546 638 aa8.8□□□□□ -1
TTC39C-208ENST00000584095 C20orf204Q6ZNR8 217 aa8.8□□□□□ -1
TTC39C-208ENST00000584095 SULF2Q8IWU5 870 aa8.8□□□□□ -1
TTC39C-208ENST00000584095 TRIM42Q8IWZ5 723 aa8.8□□□□□ -1
TTC39C-208ENST00000584095 SEC16BQ96JE7 1060 aa8.8□□□□□ -1
TTC39C-208ENST00000584095 GINM1Q9NU53 330 aa8.8□□□□□ -1
TTC39C-208ENST00000584095 GDF2Q9UK05 429 aaPredicted RBP8.8□□□□□ -1
TTC39C-208ENST00000584095 EFR3BQ9Y2G0 817 aa8.8□□□□□ -1
TTC39C-208ENST00000584095 ALBP02768 609 aa8.79□□□□□ -1
TTC39C-208ENST00000584095 EPXP11678 715 aa8.79□□□□□ -1
TTC39C-208ENST00000584095 ALAS2P22557 587 aa8.79□□□□□ -1
TTC39C-208ENST00000584095 NASPP49321 788 aaPredicted RBP8.79□□□□□ -1
TTC39C-208ENST00000584095 SRSF11Q05519 484 aaKnown RBP8.79□□□□□ -1
TTC39C-208ENST00000584095 IKBKEQ14164 716 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms