RNA–Protein interactions for RNA: ENST00000583593.2

CCDC57-218, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-218ENST00000583593 ANGEL1Q9UNK9 670 aaKnown RBP17.18■□□□□ 0.34
CCDC57-218ENST00000583593 AOX1Q06278 1338 aa17.18■□□□□ 0.34
CCDC57-218ENST00000583593 IL1R1P14778 569 aa17.17■□□□□ 0.34
CCDC57-218ENST00000583593 DLGAP5Q15398 846 aa17.17■□□□□ 0.34
CCDC57-218ENST00000583593 PKN2Q16513 984 aaKnown RBP17.17■□□□□ 0.34
CCDC57-218ENST00000583593 EPHA10Q5JZY3 1008 aa17.17■□□□□ 0.34
CCDC57-218ENST00000583593 SPRYD7Q5W111 196 aa17.17■□□□□ 0.34
CCDC57-218ENST00000583593 HTTP42858 3142 aa17.17■□□□□ 0.34
CCDC57-218ENST00000583593 LAMB1P07942 1786 aa17.17■□□□□ 0.34
CCDC57-218ENST00000583593 COL1A1P02452 1464 aaPredicted RBP17.17■□□□□ 0.34
CCDC57-218ENST00000583593 SREBF2Q12772 1141 aa17.16■□□□□ 0.34
CCDC57-218ENST00000583593 IFIT5Q13325 482 aaKnown RBP17.16■□□□□ 0.34
CCDC57-218ENST00000583593 MAP3K11Q16584 847 aa17.16■□□□□ 0.34
CCDC57-218ENST00000583593 SPINK5Q9NQ38 1064 aaPredicted RBP17.16■□□□□ 0.34
CCDC57-218ENST00000583593 LMBR1LQ6UX01 489 aa17.15■□□□□ 0.34
CCDC57-218ENST00000583593 WDR63Q8IWG1 891 aa17.15■□□□□ 0.34
CCDC57-218ENST00000583593 ZNF594Q96JF6 807 aaPredicted RBP17.15■□□□□ 0.34
CCDC57-218ENST00000583593 PRMT6Q96LA8 375 aaPredicted RBP17.15■□□□□ 0.34
CCDC57-218ENST00000583593 SALL2Q9Y467 1007 aaPredicted RBP17.15■□□□□ 0.34
CCDC57-218ENST00000583593 CENPFP49454 3210 aa17.14■□□□□ 0.33
CCDC57-218ENST00000583593 F8W031 263 aaPredicted RBP17.14■□□□□ 0.33
CCDC57-218ENST00000583593 FKBP1AP62942 108 aaKnown RBP17.14■□□□□ 0.33
CCDC57-218ENST00000583593 CFAP100Q494V2 611 aa17.14■□□□□ 0.33
CCDC57-218ENST00000583593 CLMNQ96JQ2 1002 aa17.14■□□□□ 0.33
CCDC57-218ENST00000583593 JAG2Q9Y219 1238 aa17.14■□□□□ 0.33
CCDC57-218ENST00000583593 CHMP3Q9Y3E7 222 aa17.14■□□□□ 0.33
CCDC57-218ENST00000583593 CLRN2A0PK11 232 aa17.13■□□□□ 0.33
CCDC57-218ENST00000583593 SPDYE2BA6NHP3 402 aa17.13■□□□□ 0.33
CCDC57-218ENST00000583593 FKTNO75072 461 aa17.13■□□□□ 0.33
CCDC57-218ENST00000583593 SPDYE6P0CI01 402 aa17.13■□□□□ 0.33
CCDC57-218ENST00000583593 FBXO46Q6PJ61 603 aaPredicted RBP17.13■□□□□ 0.33
CCDC57-218ENST00000583593 ZNF804AQ7Z570 1209 aa17.13■□□□□ 0.33
CCDC57-218ENST00000583593 PPP2R3BQ9Y5P8 575 aa17.13■□□□□ 0.33
CCDC57-218ENST00000583593 NBPF12Q5TAG4 269 aaPredicted RBP17.12■□□□□ 0.33
CCDC57-218ENST00000583593 IFNL1Q8IU54 200 aa17.12■□□□□ 0.33
CCDC57-218ENST00000583593 SLC10A4Q96EP9 437 aa17.12■□□□□ 0.33
CCDC57-218ENST00000583593 WNK4Q96J92 1243 aa17.12■□□□□ 0.33
CCDC57-218ENST00000583593 MRS2Q9HD23 443 aa17.12■□□□□ 0.33
CCDC57-218ENST00000583593 MKI67P46013 3256 aaKnown RBP17.11■□□□□ 0.33
CCDC57-218ENST00000583593 MANSC4A6NHS7 340 aaPredicted RBP17.11■□□□□ 0.33
CCDC57-218ENST00000583593 GRM8O00222 908 aa17.11■□□□□ 0.33
CCDC57-218ENST00000583593 IGF2BP3O00425 579 aaKnown RBP eCLIP17.11■□□□□ 0.33
CCDC57-218ENST00000583593 PLIN1O60240 522 aa17.11■□□□□ 0.33
CCDC57-218ENST00000583593 LDHAL6AQ6ZMR3 332 aa17.11■□□□□ 0.33
CCDC57-218ENST00000583593 PPP1R12BO60237 982 aaPredicted RBP17.1■□□□□ 0.33
CCDC57-218ENST00000583593 USP2O75604 605 aaPredicted RBP17.1■□□□□ 0.33
CCDC57-218ENST00000583593 ALDH1A1P00352 501 aa17.1■□□□□ 0.33
CCDC57-218ENST00000583593 ZBTB48P10074 688 aaPredicted RBP17.1■□□□□ 0.33
CCDC57-218ENST00000583593 GJA5P36382 358 aa17.1■□□□□ 0.33
CCDC57-218ENST00000583593 INHBEP58166 350 aa17.1■□□□□ 0.33
CCDC57-218ENST00000583593 CCDC57Q2TAC2 916 aa17.1■□□□□ 0.33
CCDC57-218ENST00000583593 TDRD7Q8NHU6 1098 aaKnown RBP17.1■□□□□ 0.33
CCDC57-218ENST00000583593 KAZALD1Q96I82 304 aa17.1■□□□□ 0.33
CCDC57-218ENST00000583593 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.1■□□□□ 0.33
CCDC57-218ENST00000583593 FAM205AQ6ZU69 1335 aa17.1■□□□□ 0.33
CCDC57-218ENST00000583593 BRCA2P51587 3418 aa17.1■□□□□ 0.33
CCDC57-218ENST00000583593 OTOFQ9HC10 1997 aa17.09■□□□□ 0.33
CCDC57-218ENST00000583593 MYO1BO43795 1136 aa17.09■□□□□ 0.33
CCDC57-218ENST00000583593 RASA3Q14644 834 aa17.09■□□□□ 0.33
CCDC57-218ENST00000583593 SUPT20HL1Q3ZLR7 823 aa17.09■□□□□ 0.33
CCDC57-218ENST00000583593 PUS3Q9BZE2 481 aaKnown RBP17.09■□□□□ 0.33
CCDC57-218ENST00000583593 VEZTQ9HBM0 779 aa17.09■□□□□ 0.33
CCDC57-218ENST00000583593 CNNM1Q9NRU3 951 aa17.09■□□□□ 0.33
CCDC57-218ENST00000583593 UNCXA6NJT0 531 aa17.08■□□□□ 0.32
CCDC57-218ENST00000583593 GYG1P46976 350 aa17.08■□□□□ 0.32
CCDC57-218ENST00000583593 PRPF38BQ5VTL8 546 aaKnown RBP17.08■□□□□ 0.32
CCDC57-218ENST00000583593 SUCLG2Q96I99 432 aa17.08■□□□□ 0.32
CCDC57-218ENST00000583593 FAM84BQ96KN1 310 aaPredicted RBP17.08■□□□□ 0.32
CCDC57-218ENST00000583593 ARAP2Q8WZ64 1704 aa17.07■□□□□ 0.32
CCDC57-218ENST00000583593 ALDH1L1O75891 902 aa17.07■□□□□ 0.32
CCDC57-218ENST00000583593 RBM5P52756 815 aaKnown RBP eCLIP17.07■□□□□ 0.32
CCDC57-218ENST00000583593 UBE4AQ14139 1066 aa17.07■□□□□ 0.32
CCDC57-218ENST00000583593 SPDYE2Q495Y8 402 aa17.07■□□□□ 0.32
CCDC57-218ENST00000583593 TAF7LQ5H9L4 462 aa17.07■□□□□ 0.32
CCDC57-218ENST00000583593 CDAN1Q8IWY9 1227 aa17.07■□□□□ 0.32
CCDC57-218ENST00000583593 PTPN18Q99952 460 aa17.07■□□□□ 0.32
CCDC57-218ENST00000583593 C9orf78Q9NZ63 289 aaPredicted RBP17.07■□□□□ 0.32
CCDC57-218ENST00000583593 ZNF70Q9UC06 446 aaPredicted RBP17.07■□□□□ 0.32
CCDC57-218ENST00000583593 HIBADHP31937 336 aaKnown RBP17.06■□□□□ 0.32
CCDC57-218ENST00000583593 IREB2P48200 963 aaKnown RBP17.06■□□□□ 0.32
CCDC57-218ENST00000583593 MFSD14BQ5SR56 506 aa17.06■□□□□ 0.32
CCDC57-218ENST00000583593 OTOP1Q7RTM1 612 aa17.06■□□□□ 0.32
CCDC57-218ENST00000583593 TEPSINQ96N21 525 aa17.06■□□□□ 0.32
CCDC57-218ENST00000583593 TDRD3Q9H7E2 651 aaKnown RBP17.06■□□□□ 0.32
CCDC57-218ENST00000583593 TTF2Q9UNY4 1162 aaKnown RBP17.06■□□□□ 0.32
CCDC57-218ENST00000583593 RIPOR2Q9Y4F9 1068 aa17.06■□□□□ 0.32
CCDC57-218ENST00000583593 TRIM17Q9Y577 477 aa17.06■□□□□ 0.32
CCDC57-218ENST00000583593 TESPA1A2RU30 521 aaPredicted RBP17.05■□□□□ 0.32
CCDC57-218ENST00000583593 NBPF7P0C2Y1 421 aaPredicted RBP17.05■□□□□ 0.32
CCDC57-218ENST00000583593 CAP1Q01518 475 aa17.05■□□□□ 0.32
CCDC57-218ENST00000583593 CRHR2Q13324 411 aa17.05■□□□□ 0.32
CCDC57-218ENST00000583593 GRIK5Q16478 980 aa17.05■□□□□ 0.32
CCDC57-218ENST00000583593 SLC4A10Q6U841 1118 aa17.05■□□□□ 0.32
CCDC57-218ENST00000583593 ANKRD13AQ8IZ07 590 aa17.05■□□□□ 0.32
CCDC57-218ENST00000583593 SRCIN1Q9C0H9 1055 aa17.05■□□□□ 0.32
CCDC57-218ENST00000583593 SERPINA10Q9UK55 444 aa17.05■□□□□ 0.32
CCDC57-218ENST00000583593 UTYO14607 1347 aa17.04■□□□□ 0.32
CCDC57-218ENST00000583593 DZIP1LQ8IYY4 767 aaKnown RBP17.04■□□□□ 0.32
CCDC57-218ENST00000583593 MS4A4AQ96JQ5 239 aa17.04■□□□□ 0.32
CCDC57-218ENST00000583593 CRKP46108 304 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms