RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 VPS37DQ86XT2 251 aa17.37■□□□□ 0.37
GGA3-215ENST00000582821 ZBED3Q96IU2 234 aaPredicted RBP17.37■□□□□ 0.37
GGA3-215ENST00000582821 HDAC9Q9UKV0 1011 aa17.37■□□□□ 0.37
GGA3-215ENST00000582821 ZBTB22O15209 634 aa17.36■□□□□ 0.37
GGA3-215ENST00000582821 SLC5A1P13866 664 aa17.36■□□□□ 0.37
GGA3-215ENST00000582821 BCAMP50895 628 aa17.36■□□□□ 0.37
GGA3-215ENST00000582821 ATP8B2P98198 1209 aa17.36■□□□□ 0.37
GGA3-215ENST00000582821 KRT26Q7Z3Y9 468 aa17.36■□□□□ 0.37
GGA3-215ENST00000582821 USP48Q86UV5 1035 aa17.36■□□□□ 0.37
GGA3-215ENST00000582821 KIAA0825Q8IV33 1275 aa17.36■□□□□ 0.37
GGA3-215ENST00000582821 ITPRIPQ8IWB1 547 aa17.36■□□□□ 0.37
GGA3-215ENST00000582821 PITPNM2Q9BZ72 1349 aa17.36■□□□□ 0.37
GGA3-215ENST00000582821 PNMA6EA0A0J9YXQ4 647 aa17.35■□□□□ 0.37
GGA3-215ENST00000582821 RASSF10A6NK89 507 aa17.35■□□□□ 0.37
GGA3-215ENST00000582821 WNT10BO00744 389 aa17.35■□□□□ 0.37
GGA3-215ENST00000582821 POLA2Q14181 598 aa17.35■□□□□ 0.37
GGA3-215ENST00000582821 MTMR14Q8NCE2 650 aa17.35■□□□□ 0.37
GGA3-215ENST00000582821 PANK1Q8TE04 598 aa17.35■□□□□ 0.37
GGA3-215ENST00000582821 ASTN2O75129 1339 aaPredicted RBP17.34■□□□□ 0.37
GGA3-215ENST00000582821 CNTNAP1P78357 1384 aa17.34■□□□□ 0.37
GGA3-215ENST00000582821 ATP2B3Q16720 1220 aa17.34■□□□□ 0.37
GGA3-215ENST00000582821 NBPF9Q3BBW0 867 aa17.34■□□□□ 0.37
GGA3-215ENST00000582821 ANGEL2Q5VTE6 544 aaKnown RBP17.34■□□□□ 0.37
GGA3-215ENST00000582821 SULF1Q8IWU6 871 aa17.34■□□□□ 0.37
GGA3-215ENST00000582821 SSH3Q8TE77 659 aa17.34■□□□□ 0.37
GGA3-215ENST00000582821 GGA3Q9NZ52 723 aa17.34■□□□□ 0.37
GGA3-215ENST00000582821 CELF2O95319 508 aaKnown RBP17.33■□□□□ 0.36
GGA3-215ENST00000582821 DEFB115Q30KQ5 88 aa17.33■□□□□ 0.36
GGA3-215ENST00000582821 MFSD14BQ5SR56 506 aa17.33■□□□□ 0.36
GGA3-215ENST00000582821 TBC1D22AQ8WUA7 517 aa17.33■□□□□ 0.36
GGA3-215ENST00000582821 TLL2Q9Y6L7 1015 aa17.33■□□□□ 0.36
GGA3-215ENST00000582821 MKRN1Q9UHC7 482 aaKnown RBP17.32■□□□□ 0.36
GGA3-215ENST00000582821 JAG2Q9Y219 1238 aa17.32■□□□□ 0.36
GGA3-215ENST00000582821 AKAP2Q9Y2D5 859 aa17.32■□□□□ 0.36
GGA3-215ENST00000582821 FRAT2O75474 233 aaPredicted RBP17.31■□□□□ 0.36
GGA3-215ENST00000582821 G3BP1Q13283 466 aaKnown RBP eCLIP17.31■□□□□ 0.36
GGA3-215ENST00000582821 PDE3AQ14432 1141 aa17.31■□□□□ 0.36
GGA3-215ENST00000582821 MVPQ14764 893 aaKnown RBP17.31■□□□□ 0.36
GGA3-215ENST00000582821 DLGAP5Q15398 846 aa17.31■□□□□ 0.36
GGA3-215ENST00000582821 HHIPL1Q96JK4 782 aa17.31■□□□□ 0.36
GGA3-215ENST00000582821 MRIQ9BWK5 157 aa17.31■□□□□ 0.36
GGA3-215ENST00000582821 ABT1Q9ULW3 272 aaKnown RBP17.31■□□□□ 0.36
GGA3-215ENST00000582821 IQSEC3Q9UPP2 1182 aaPredicted RBP17.31■□□□□ 0.36
GGA3-215ENST00000582821 SUGT1Q9Y2Z0 365 aa17.31■□□□□ 0.36
GGA3-215ENST00000582821 ADM5C9JUS6 153 aa17.3■□□□□ 0.36
GGA3-215ENST00000582821 HDLBPQ00341 1268 aaKnown RBP17.3■□□□□ 0.36
GGA3-215ENST00000582821 TFCP2Q12800 502 aa17.3■□□□□ 0.36
GGA3-215ENST00000582821 DLK2Q6UY11 383 aa17.3■□□□□ 0.36
GGA3-215ENST00000582821 SAPCD2Q86UD0 394 aa17.3■□□□□ 0.36
GGA3-215ENST00000582821 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.3■□□□□ 0.36
GGA3-215ENST00000582821 C1orf115Q9H7X2 142 aa17.3■□□□□ 0.36
GGA3-215ENST00000582821 GNL3LQ9NVN8 582 aaKnown RBP17.3■□□□□ 0.36
GGA3-215ENST00000582821 SERPINA10Q9UK55 444 aa17.3■□□□□ 0.36
GGA3-215ENST00000582821 DDX19BQ9UMR2 479 aa17.3■□□□□ 0.36
GGA3-215ENST00000582821 NOP58Q9Y2X3 529 aaKnown RBP17.3■□□□□ 0.36
GGA3-215ENST00000582821 MYH13Q9UKX3 1938 aa17.29■□□□□ 0.36
GGA3-215ENST00000582821 F8W031 263 aaPredicted RBP17.29■□□□□ 0.36
GGA3-215ENST00000582821 SEMA3EO15041 775 aa17.29■□□□□ 0.36
GGA3-215ENST00000582821 VEGFBP49765 207 aa17.29■□□□□ 0.36
GGA3-215ENST00000582821 TIMM10P62072 90 aa17.29■□□□□ 0.36
GGA3-215ENST00000582821 CFAP100Q494V2 611 aa17.29■□□□□ 0.36
GGA3-215ENST00000582821 WDR66Q8TBY9 1149 aa17.29■□□□□ 0.36
GGA3-215ENST00000582821 CHMP4BQ9H444 224 aaKnown RBP17.29■□□□□ 0.36
GGA3-215ENST00000582821 TTF2Q9UNY4 1162 aaKnown RBP17.29■□□□□ 0.36
GGA3-215ENST00000582821 ARAP2Q8WZ64 1704 aa17.29■□□□□ 0.36
GGA3-215ENST00000582821 ECM29Q5VYK3 1845 aa17.28■□□□□ 0.36
GGA3-215ENST00000582821 A0A1B0GUL7 405 aa17.28■□□□□ 0.36
GGA3-215ENST00000582821 SPDYE2BA6NHP3 402 aa17.28■□□□□ 0.36
GGA3-215ENST00000582821 SPDYE6P0CI01 402 aa17.28■□□□□ 0.36
GGA3-215ENST00000582821 CHAF1AQ13111 956 aaPredicted RBP17.28■□□□□ 0.36
GGA3-215ENST00000582821 CEP85Q6P2H3 762 aa17.28■□□□□ 0.36
GGA3-215ENST00000582821 CDCA5Q96FF9 252 aa17.28■□□□□ 0.36
GGA3-215ENST00000582821 PRMT6Q96LA8 375 aaPredicted RBP17.28■□□□□ 0.36
GGA3-215ENST00000582821 GPR108Q9NPR9 543 aa17.28■□□□□ 0.36
GGA3-215ENST00000582821 ZBTB40Q9NUA8 1239 aa17.28■□□□□ 0.36
GGA3-215ENST00000582821 COG6Q9Y2V7 657 aa17.28■□□□□ 0.36
GGA3-215ENST00000582821 ADORA1P30542 326 aa17.27■□□□□ 0.36
GGA3-215ENST00000582821 CCDC102BQ68D86 513 aa17.27■□□□□ 0.36
GGA3-215ENST00000582821 APOBEC3FQ8IUX4 373 aaKnown RBP17.27■□□□□ 0.36
GGA3-215ENST00000582821 C2orf69Q8N8R5 385 aa17.27■□□□□ 0.36
GGA3-215ENST00000582821 XAGE2Q96GT9 111 aa17.27■□□□□ 0.36
GGA3-215ENST00000582821 ZNF408Q9H9D4 720 aa17.27■□□□□ 0.36
GGA3-215ENST00000582821 GBA2Q9HCG7 927 aaPredicted RBP17.27■□□□□ 0.36
GGA3-215ENST00000582821 DENND2AQ9ULE3 1009 aa17.27■□□□□ 0.36
GGA3-215ENST00000582821 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.27■□□□□ 0.36
GGA3-215ENST00000582821 WDR33Q9C0J8 1336 aaKnown RBP17.26■□□□□ 0.35
GGA3-215ENST00000582821 MYO1BO43795 1136 aa17.26■□□□□ 0.35
GGA3-215ENST00000582821 SURF6O75683 361 aaKnown RBP17.26■□□□□ 0.35
GGA3-215ENST00000582821 ECE1P42892 770 aa17.26■□□□□ 0.35
GGA3-215ENST00000582821 PHKA1P46020 1223 aa17.26■□□□□ 0.35
GGA3-215ENST00000582821 FKBP1BP68106 108 aa17.26■□□□□ 0.35
GGA3-215ENST00000582821 GRIK5Q16478 980 aa17.26■□□□□ 0.35
GGA3-215ENST00000582821 RPAP2Q8IXW5 612 aaPredicted RBP17.26■□□□□ 0.35
GGA3-215ENST00000582821 PCDHAC2Q9Y5I4 1007 aa17.26■□□□□ 0.35
GGA3-215ENST00000582821 PDS5AQ29RF7 1337 aaKnown RBP17.25■□□□□ 0.35
GGA3-215ENST00000582821 SALL1Q9NSC2 1324 aa17.25■□□□□ 0.35
GGA3-215ENST00000582821 CRKP46108 304 aa17.25■□□□□ 0.35
GGA3-215ENST00000582821 RBM5P52756 815 aaKnown RBP eCLIP17.25■□□□□ 0.35
GGA3-215ENST00000582821 CAPNS2Q96L46 248 aa17.25■□□□□ 0.35
GGA3-215ENST00000582821 MAST3O60307 1309 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms