RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 ZBTB22O15209 634 aa20.25■□□□□ 0.83
RNF43-206ENST00000582293 HIRAP54198 1017 aaPredicted RBP20.25■□□□□ 0.83
RNF43-206ENST00000582293 GRIK5Q16478 980 aa20.25■□□□□ 0.83
RNF43-206ENST00000582293 VPS37DQ86XT2 251 aa20.25■□□□□ 0.83
RNF43-206ENST00000582293 TRPM4Q8TD43 1214 aa20.25■□□□□ 0.83
RNF43-206ENST00000582293 NEUROD6Q96NK8 337 aa20.25■□□□□ 0.83
RNF43-206ENST00000582293 DBNDD2Q9BQY9 259 aa20.25■□□□□ 0.83
RNF43-206ENST00000582293 DCTPP1Q9H773 170 aa20.25■□□□□ 0.83
RNF43-206ENST00000582293 MYH13Q9UKX3 1938 aa20.24■□□□□ 0.83
RNF43-206ENST00000582293 APBB1O00213 710 aa20.24■□□□□ 0.83
RNF43-206ENST00000582293 LMOD1P29536 600 aaPredicted RBP20.24■□□□□ 0.83
RNF43-206ENST00000582293 ZNF280AP59817 542 aaPredicted RBP20.24■□□□□ 0.83
RNF43-206ENST00000582293 FKBP1AP62942 108 aaKnown RBP20.24■□□□□ 0.83
RNF43-206ENST00000582293 HSP90AB4PQ58FF6 505 aa20.24■□□□□ 0.83
RNF43-206ENST00000582293 ERC1Q8IUD2 1116 aa20.24■□□□□ 0.83
RNF43-206ENST00000582293 IL1RAPL2Q9NP60 686 aa20.24■□□□□ 0.83
RNF43-206ENST00000582293 ADARB2Q9NS39 739 aaKnown RBP20.24■□□□□ 0.83
RNF43-206ENST00000582293 DBNLQ9UJU6 430 aaKnown RBP20.24■□□□□ 0.83
RNF43-206ENST00000582293 RAB11FIP3O75154 756 aa20.23■□□□□ 0.83
RNF43-206ENST00000582293 TOMM70O94826 608 aa20.23■□□□□ 0.83
RNF43-206ENST00000582293 SAMD7Q7Z3H4 446 aa20.23■□□□□ 0.83
RNF43-206ENST00000582293 CCDC8Q9H0W5 538 aaPredicted RBP20.23■□□□□ 0.83
RNF43-206ENST00000582293 MYO3BQ8WXR4 1341 aa20.23■□□□□ 0.83
RNF43-206ENST00000582293 CHAF1AQ13111 956 aaPredicted RBP20.22■□□□□ 0.83
RNF43-206ENST00000582293 AAMPQ13685 434 aa20.22■□□□□ 0.83
RNF43-206ENST00000582293 KIF1BPQ96EK5 621 aa20.22■□□□□ 0.83
RNF43-206ENST00000582293 USP17L8P0C7I0 530 aa20.21■□□□□ 0.83
RNF43-206ENST00000582293 HDAC1Q13547 482 aaPredicted RBP20.21■□□□□ 0.83
RNF43-206ENST00000582293 RASGRF1Q13972 1273 aa20.21■□□□□ 0.83
RNF43-206ENST00000582293 SCARF1Q14162 830 aa20.21■□□□□ 0.83
RNF43-206ENST00000582293 TBC1D10BQ4KMP7 808 aaPredicted RBP20.21■□□□□ 0.83
RNF43-206ENST00000582293 MFSD14BQ5SR56 506 aa20.21■□□□□ 0.83
RNF43-206ENST00000582293 USP50Q70EL3 339 aaPredicted RBP20.21■□□□□ 0.83
RNF43-206ENST00000582293 KIAA0825Q8IV33 1275 aa20.21■□□□□ 0.83
RNF43-206ENST00000582293 RBM46Q8TBY0 533 aaKnown RBP20.21■□□□□ 0.83
RNF43-206ENST00000582293 H7C1D1 291 aa20.2■□□□□ 0.82
RNF43-206ENST00000582293 SMARCA5O60264 1052 aaPredicted RBP20.2■□□□□ 0.82
RNF43-206ENST00000582293 ARID4AP29374 1257 aaPredicted RBP20.2■□□□□ 0.82
RNF43-206ENST00000582293 EAPPQ56P03 285 aaPredicted RBP20.2■□□□□ 0.82
RNF43-206ENST00000582293 PNMA8AQ86V59 439 aaPredicted RBP20.2■□□□□ 0.82
RNF43-206ENST00000582293 AKAP11Q9UKA4 1901 aa20.19■□□□□ 0.82
RNF43-206ENST00000582293 SEMA3EO15041 775 aa20.19■□□□□ 0.82
RNF43-206ENST00000582293 PI16Q6UXB8 463 aa20.19■□□□□ 0.82
RNF43-206ENST00000582293 AACSQ86V21 672 aa20.19■□□□□ 0.82
RNF43-206ENST00000582293 LDHDQ86WU2 507 aa20.19■□□□□ 0.82
RNF43-206ENST00000582293 C16orf71Q8IYS4 520 aaPredicted RBP20.19■□□□□ 0.82
RNF43-206ENST00000582293 HMG20BQ9P0W2 317 aa20.19■□□□□ 0.82
RNF43-206ENST00000582293 PCDHAC2Q9Y5I4 1007 aa20.19■□□□□ 0.82
RNF43-206ENST00000582293 ASTN2O75129 1339 aaPredicted RBP20.19■□□□□ 0.82
RNF43-206ENST00000582293 F8W031 263 aaPredicted RBP20.18■□□□□ 0.82
RNF43-206ENST00000582293 FRAT2O75474 233 aaPredicted RBP20.18■□□□□ 0.82
RNF43-206ENST00000582293 IGHDP01880 384 aa20.18■□□□□ 0.82
RNF43-206ENST00000582293 MCAMP43121 646 aa20.18■□□□□ 0.82
RNF43-206ENST00000582293 RBM26Q5T8P6 1007 aaKnown RBP20.18■□□□□ 0.82
RNF43-206ENST00000582293 ZBED3Q96IU2 234 aaPredicted RBP20.18■□□□□ 0.82
RNF43-206ENST00000582293 MYOZ2Q9NPC6 264 aa20.18■□□□□ 0.82
RNF43-206ENST00000582293 GNL3LQ9NVN8 582 aaKnown RBP20.18■□□□□ 0.82
RNF43-206ENST00000582293 PGAP2Q9UHJ9 254 aa20.18■□□□□ 0.82
RNF43-206ENST00000582293 DENND2AQ9ULE3 1009 aa20.18■□□□□ 0.82
RNF43-206ENST00000582293 PDS5AQ29RF7 1337 aaKnown RBP20.18■□□□□ 0.82
RNF43-206ENST00000582293 KIF4BQ2VIQ3 1234 aa20.17■□□□□ 0.82
RNF43-206ENST00000582293 CHADLQ6NUI6 762 aa20.17■□□□□ 0.82
RNF43-206ENST00000582293 LRRCC1Q9C099 1032 aa20.17■□□□□ 0.82
RNF43-206ENST00000582293 AOX1Q06278 1338 aa20.17■□□□□ 0.82
RNF43-206ENST00000582293 SALL1Q9NSC2 1324 aa20.17■□□□□ 0.82
RNF43-206ENST00000582293 C1QTNF8P60827 252 aa20.16■□□□□ 0.82
RNF43-206ENST00000582293 GORABQ5T7V8 394 aa20.16■□□□□ 0.82
RNF43-206ENST00000582293 MAP1SQ66K74 1059 aaPredicted RBP20.16■□□□□ 0.82
RNF43-206ENST00000582293 CLASRPQ8N2M8 674 aaKnown RBP20.16■□□□□ 0.82
RNF43-206ENST00000582293 TBC1D22AQ8WUA7 517 aa20.16■□□□□ 0.82
RNF43-206ENST00000582293 ZNF512BQ96KM6 892 aaPredicted RBP20.16■□□□□ 0.82
RNF43-206ENST00000582293 UQCRFS1P1P0C7P4 283 aa20.15■□□□□ 0.82
RNF43-206ENST00000582293 NBPF9Q3BBW0 867 aa20.15■□□□□ 0.82
RNF43-206ENST00000582293 SMC1BQ8NDV3 1235 aa20.15■□□□□ 0.82
RNF43-206ENST00000582293 WDR66Q8TBY9 1149 aa20.15■□□□□ 0.82
RNF43-206ENST00000582293 TTF2Q9UNY4 1162 aaKnown RBP20.15■□□□□ 0.82
RNF43-206ENST00000582293 WNT10BO00744 389 aa20.14■□□□□ 0.81
RNF43-206ENST00000582293 ITGBL1O95965 494 aaPredicted RBP20.14■□□□□ 0.81
RNF43-206ENST00000582293 PRDX5P30044 214 aa20.14■□□□□ 0.81
RNF43-206ENST00000582293 FSTL1Q12841 308 aa20.14■□□□□ 0.81
RNF43-206ENST00000582293 TTC39AQ5SRH9 613 aa20.14■□□□□ 0.81
RNF43-206ENST00000582293 OGFOD1Q8N543 542 aa20.14■□□□□ 0.81
RNF43-206ENST00000582293 SPATA5Q8NB90 893 aa20.14■□□□□ 0.81
RNF43-206ENST00000582293 CLEC11AQ9Y240 323 aa20.14■□□□□ 0.81
RNF43-206ENST00000582293 MMP14P50281 582 aa20.13■□□□□ 0.81
RNF43-206ENST00000582293 CFAP100Q494V2 611 aa20.13■□□□□ 0.81
RNF43-206ENST00000582293 CCDC158Q5M9N0 1113 aa20.13■□□□□ 0.81
RNF43-206ENST00000582293 MTMR14Q8NCE2 650 aa20.13■□□□□ 0.81
RNF43-206ENST00000582293 ZC3H15Q8WU90 426 aaKnown RBP20.13■□□□□ 0.81
RNF43-206ENST00000582293 SNRKQ9NRH2 765 aa20.13■□□□□ 0.81
RNF43-206ENST00000582293 HDAC9Q9UKV0 1011 aa20.13■□□□□ 0.81
RNF43-206ENST00000582293 TBC1D9Q6ZT07 1266 aa20.12■□□□□ 0.81
RNF43-206ENST00000582293 SMC5Q8IY18 1101 aa20.12■□□□□ 0.81
RNF43-206ENST00000582293 ZNF384Q8TF68 577 aa20.12■□□□□ 0.81
RNF43-206ENST00000582293 BCL11AQ9H165 835 aa20.12■□□□□ 0.81
RNF43-206ENST00000582293 SUGT1Q9Y2Z0 365 aa20.12■□□□□ 0.81
RNF43-206ENST00000582293 NDUFB9Q9Y6M9 179 aa20.12■□□□□ 0.81
RNF43-206ENST00000582293 PASKQ96RG2 1323 aa20.11■□□□□ 0.81
RNF43-206ENST00000582293 CYP2E1P05181 493 aaPredicted RBP20.11■□□□□ 0.81
RNF43-206ENST00000582293 IFIT2P09913 472 aaKnown RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms