RNA–Protein interactions for RNA: ENST00000581514.1

SCN4A-202, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

TSL 3

Gene SCN4A, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-202ENST00000581514 SREBF2Q12772 1141 aa18.86■□□□□ 0.61
SCN4A-202ENST00000581514 EPHA10Q5JZY3 1008 aa18.86■□□□□ 0.61
SCN4A-202ENST00000581514 DEFB129Q9H1M3 183 aa18.86■□□□□ 0.61
SCN4A-202ENST00000581514 SPINK5Q9NQ38 1064 aaPredicted RBP18.86■□□□□ 0.61
SCN4A-202ENST00000581514 ANGEL1Q9UNK9 670 aaKnown RBP18.86■□□□□ 0.61
SCN4A-202ENST00000581514 GRM8O00222 908 aa18.85■□□□□ 0.61
SCN4A-202ENST00000581514 ANP32CO43423 234 aa18.85■□□□□ 0.61
SCN4A-202ENST00000581514 FKBP1AP62942 108 aaKnown RBP18.85■□□□□ 0.61
SCN4A-202ENST00000581514 CCDC57Q2TAC2 916 aa18.85■□□□□ 0.61
SCN4A-202ENST00000581514 PCDHAC2Q9Y5I4 1007 aa18.85■□□□□ 0.61
SCN4A-202ENST00000581514 F8W031 263 aaPredicted RBP18.84■□□□□ 0.61
SCN4A-202ENST00000581514 GPR25O00155 361 aa18.84■□□□□ 0.61
SCN4A-202ENST00000581514 PKN2Q16513 984 aaKnown RBP18.84■□□□□ 0.61
SCN4A-202ENST00000581514 NOM1Q5C9Z4 860 aaKnown RBP18.84■□□□□ 0.61
SCN4A-202ENST00000581514 TAF7LQ5H9L4 462 aa18.84■□□□□ 0.61
SCN4A-202ENST00000581514 SPRYD7Q5W111 196 aa18.84■□□□□ 0.61
SCN4A-202ENST00000581514 ZNF594Q96JF6 807 aaPredicted RBP18.84■□□□□ 0.61
SCN4A-202ENST00000581514 FZD1Q9UP38 647 aa18.84■□□□□ 0.61
SCN4A-202ENST00000581514 HPS5Q9UPZ3 1129 aa18.84■□□□□ 0.61
SCN4A-202ENST00000581514 PDE4DIPQ5VU43 2346 aa18.83■□□□□ 0.61
SCN4A-202ENST00000581514 PLIN1O60240 522 aa18.83■□□□□ 0.6
SCN4A-202ENST00000581514 CFAP100Q494V2 611 aa18.83■□□□□ 0.6
SCN4A-202ENST00000581514 LDHAL6AQ6ZMR3 332 aa18.83■□□□□ 0.6
SCN4A-202ENST00000581514 CFHR5Q9BXR6 569 aa18.83■□□□□ 0.6
SCN4A-202ENST00000581514 CNNM1Q9NRU3 951 aa18.83■□□□□ 0.6
SCN4A-202ENST00000581514 PPP2R3BQ9Y5P8 575 aa18.83■□□□□ 0.6
SCN4A-202ENST00000581514 SSC5DA1L4H1 1573 aa18.83■□□□□ 0.6
SCN4A-202ENST00000581514 SPDYE2BA6NHP3 402 aa18.82■□□□□ 0.6
SCN4A-202ENST00000581514 MYO1BO43795 1136 aa18.82■□□□□ 0.6
SCN4A-202ENST00000581514 SPDYE6P0CI01 402 aa18.82■□□□□ 0.6
SCN4A-202ENST00000581514 MAP3K11Q16584 847 aa18.82■□□□□ 0.6
SCN4A-202ENST00000581514 C9orf78Q9NZ63 289 aaPredicted RBP18.82■□□□□ 0.6
SCN4A-202ENST00000581514 JAG2Q9Y219 1238 aa18.82■□□□□ 0.6
SCN4A-202ENST00000581514 CLRN2A0PK11 232 aa18.81■□□□□ 0.6
SCN4A-202ENST00000581514 ALDH1L1O75891 902 aa18.81■□□□□ 0.6
SCN4A-202ENST00000581514 SLC10A4Q96EP9 437 aa18.81■□□□□ 0.6
SCN4A-202ENST00000581514 PRMT6Q96LA8 375 aaPredicted RBP18.81■□□□□ 0.6
SCN4A-202ENST00000581514 R3HDMLQ9H3Y0 253 aa18.81■□□□□ 0.6
SCN4A-202ENST00000581514 LAMB1P07942 1786 aa18.81■□□□□ 0.6
SCN4A-202ENST00000581514 AOX1Q06278 1338 aa18.8■□□□□ 0.6
SCN4A-202ENST00000581514 PPP1R12BO60237 982 aaPredicted RBP18.8■□□□□ 0.6
SCN4A-202ENST00000581514 SLC4A10Q6U841 1118 aa18.8■□□□□ 0.6
SCN4A-202ENST00000581514 SRCIN1Q9C0H9 1055 aa18.8■□□□□ 0.6
SCN4A-202ENST00000581514 FAM205AQ6ZU69 1335 aa18.79■□□□□ 0.6
SCN4A-202ENST00000581514 MANSC4A6NHS7 340 aaPredicted RBP18.79■□□□□ 0.6
SCN4A-202ENST00000581514 FKTNO75072 461 aa18.79■□□□□ 0.6
SCN4A-202ENST00000581514 RBM5P52756 815 aaKnown RBP eCLIP18.79■□□□□ 0.6
SCN4A-202ENST00000581514 SUPT20HL1Q3ZLR7 823 aa18.79■□□□□ 0.6
SCN4A-202ENST00000581514 CLMNQ96JQ2 1002 aa18.79■□□□□ 0.6
SCN4A-202ENST00000581514 VEZTQ9HBM0 779 aa18.79■□□□□ 0.6
SCN4A-202ENST00000581514 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.79■□□□□ 0.6
SCN4A-202ENST00000581514 UNCXA6NJT0 531 aa18.78■□□□□ 0.6
SCN4A-202ENST00000581514 ALDH1A1P00352 501 aa18.78■□□□□ 0.6
SCN4A-202ENST00000581514 ZBTB48P10074 688 aaPredicted RBP18.78■□□□□ 0.6
SCN4A-202ENST00000581514 INHBEP58166 350 aa18.78■□□□□ 0.6
SCN4A-202ENST00000581514 UBE4AQ14139 1066 aa18.78■□□□□ 0.6
SCN4A-202ENST00000581514 NBPF12Q5TAG4 269 aaPredicted RBP18.78■□□□□ 0.6
SCN4A-202ENST00000581514 FBXO46Q6PJ61 603 aaPredicted RBP18.78■□□□□ 0.6
SCN4A-202ENST00000581514 TDRD7Q8NHU6 1098 aaKnown RBP18.78■□□□□ 0.6
SCN4A-202ENST00000581514 SUCLG2Q96I99 432 aa18.78■□□□□ 0.6
SCN4A-202ENST00000581514 WNK4Q96J92 1243 aa18.78■□□□□ 0.6
SCN4A-202ENST00000581514 ARAP2Q8WZ64 1704 aa18.77■□□□□ 0.6
SCN4A-202ENST00000581514 GYG1P46976 350 aa18.77■□□□□ 0.6
SCN4A-202ENST00000581514 RASA3Q14644 834 aa18.77■□□□□ 0.6
SCN4A-202ENST00000581514 IFNL1Q8IU54 200 aa18.77■□□□□ 0.6
SCN4A-202ENST00000581514 KAZALD1Q96I82 304 aa18.77■□□□□ 0.6
SCN4A-202ENST00000581514 PUS3Q9BZE2 481 aaKnown RBP18.77■□□□□ 0.6
SCN4A-202ENST00000581514 HIBADHP31937 336 aaKnown RBP18.76■□□□□ 0.59
SCN4A-202ENST00000581514 MFSD14BQ5SR56 506 aa18.76■□□□□ 0.59
SCN4A-202ENST00000581514 FAM9BQ8IZU0 186 aa18.76■□□□□ 0.59
SCN4A-202ENST00000581514 FAM84BQ96KN1 310 aaPredicted RBP18.76■□□□□ 0.59
SCN4A-202ENST00000581514 USP2O75604 605 aaPredicted RBP18.75■□□□□ 0.59
SCN4A-202ENST00000581514 IREB2P48200 963 aaKnown RBP18.75■□□□□ 0.59
SCN4A-202ENST00000581514 SPDYE2Q495Y8 402 aa18.75■□□□□ 0.59
SCN4A-202ENST00000581514 ZNF70Q9UC06 446 aaPredicted RBP18.75■□□□□ 0.59
SCN4A-202ENST00000581514 SERPINA10Q9UK55 444 aa18.75■□□□□ 0.59
SCN4A-202ENST00000581514 TTF2Q9UNY4 1162 aaKnown RBP18.75■□□□□ 0.59
SCN4A-202ENST00000581514 RIPOR2Q9Y4F9 1068 aa18.75■□□□□ 0.59
SCN4A-202ENST00000581514 OTOFQ9HC10 1997 aa18.75■□□□□ 0.59
SCN4A-202ENST00000581514 UTYO14607 1347 aa18.74■□□□□ 0.59
SCN4A-202ENST00000581514 ZNF316A6NFI3 1004 aaPredicted RBP18.74■□□□□ 0.59
SCN4A-202ENST00000581514 IGF2BP3O00425 579 aaKnown RBP eCLIP18.74■□□□□ 0.59
SCN4A-202ENST00000581514 NBPF7P0C2Y1 421 aaPredicted RBP18.74■□□□□ 0.59
SCN4A-202ENST00000581514 TNFAIP1Q13829 316 aa18.74■□□□□ 0.59
SCN4A-202ENST00000581514 MROH5Q6ZUA9 1318 aa18.74■□□□□ 0.59
SCN4A-202ENST00000581514 GJA5P36382 358 aa18.73■□□□□ 0.59
SCN4A-202ENST00000581514 ANKRD13AQ8IZ07 590 aa18.73■□□□□ 0.59
SCN4A-202ENST00000581514 BICC1Q9H694 974 aaKnown RBP18.73■□□□□ 0.59
SCN4A-202ENST00000581514 TDRD3Q9H7E2 651 aaKnown RBP18.73■□□□□ 0.59
SCN4A-202ENST00000581514 RABL6Q3YEC7 729 aaPredicted RBP18.72■□□□□ 0.59
SCN4A-202ENST00000581514 DZIP1LQ8IYY4 767 aaKnown RBP18.72■□□□□ 0.59
SCN4A-202ENST00000581514 HTTP42858 3142 aa18.72■□□□□ 0.59
SCN4A-202ENST00000581514 ZNF521Q96K83 1311 aa18.72■□□□□ 0.59
SCN4A-202ENST00000581514 ZEB1P37275 1124 aaPredicted RBP18.71■□□□□ 0.59
SCN4A-202ENST00000581514 CRKP46108 304 aa18.71■□□□□ 0.59
SCN4A-202ENST00000581514 FBXO33Q7Z6M2 555 aa18.71■□□□□ 0.59
SCN4A-202ENST00000581514 TRIM17Q9Y577 477 aa18.71■□□□□ 0.59
SCN4A-202ENST00000581514 GRIK5Q16478 980 aa18.7■□□□□ 0.58
SCN4A-202ENST00000581514 LRRC24Q50LG9 513 aa18.7■□□□□ 0.58
SCN4A-202ENST00000581514 OTUD7BQ6GQQ9 843 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms