RNA–Protein interactions for RNA: ENST00000580014.1

RNF43-204, Transcript of ring finger protein 43, humanhuman

TSL 3

Gene RNF43, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-204ENST00000580014 NYAP1Q6ZVC0 841 aa9.02□□□□□ -0.97
RNF43-204ENST00000580014 NPM2Q86SE8 214 aaKnown RBP9.02□□□□□ -0.97
RNF43-204ENST00000580014 TMEM57Q8N5G2 664 aa9.02□□□□□ -0.97
RNF43-204ENST00000580014 CCDC191Q8NCU4 936 aa9.02□□□□□ -0.97
RNF43-204ENST00000580014 PANK1Q8TE04 598 aa9.02□□□□□ -0.97
RNF43-204ENST00000580014 SLC16A10Q8TF71 515 aa9.02□□□□□ -0.97
RNF43-204ENST00000580014 SRCIN1Q9C0H9 1055 aa9.02□□□□□ -0.97
RNF43-204ENST00000580014 SRP68Q9UHB9 627 aaKnown RBP9.02□□□□□ -0.97
RNF43-204ENST00000580014 NEURL1BA8MQ27 555 aa9.01□□□□□ -0.97
RNF43-204ENST00000580014 H7C1W4 665 aa9.01□□□□□ -0.97
RNF43-204ENST00000580014 ZBTB7BO15156 539 aaPredicted RBP9.01□□□□□ -0.97
RNF43-204ENST00000580014 ZPR1O75312 459 aa9.01□□□□□ -0.97
RNF43-204ENST00000580014 CASP7P55210 303 aa9.01□□□□□ -0.97
RNF43-204ENST00000580014 NEXNQ0ZGT2 675 aa9.01□□□□□ -0.97
RNF43-204ENST00000580014 AAMPQ13685 434 aa9.01□□□□□ -0.97
RNF43-204ENST00000580014 MVPQ14764 893 aaKnown RBP9.01□□□□□ -0.97
RNF43-204ENST00000580014 QSER1Q2KHR3 1735 aa9.01□□□□□ -0.97
RNF43-204ENST00000580014 USPL1Q5W0Q7 1092 aa9.01□□□□□ -0.97
RNF43-204ENST00000580014 NLRP10Q86W26 655 aa9.01□□□□□ -0.97
RNF43-204ENST00000580014 NLGN1Q8N2Q7 840 aa9.01□□□□□ -0.97
RNF43-204ENST00000580014 USP44Q9H0E7 712 aa9.01□□□□□ -0.97
RNF43-204ENST00000580014 FKBPLQ9UIM3 349 aa9.01□□□□□ -0.97
RNF43-204ENST00000580014 ZNF652Q9Y2D9 606 aa9.01□□□□□ -0.97
RNF43-204ENST00000580014 ZC3H4Q9UPT8 1303 aaKnown RBP9.01□□□□□ -0.97
RNF43-204ENST00000580014 DXOO77932 396 aaKnown RBP9□□□□□ -0.97
RNF43-204ENST00000580014 COPS2P61201 443 aa9□□□□□ -0.97
RNF43-204ENST00000580014 NR1H3Q13133 447 aa9□□□□□ -0.97
RNF43-204ENST00000580014 GCKRQ14397 625 aa9□□□□□ -0.97
RNF43-204ENST00000580014 PARP10Q53GL7 1025 aa9□□□□□ -0.97
RNF43-204ENST00000580014 FTSJ3Q8IY81 847 aaKnown RBP9□□□□□ -0.97
RNF43-204ENST00000580014 FAM160A2Q8N612 972 aaPredicted RBP9□□□□□ -0.97
RNF43-204ENST00000580014 KCTD12Q96CX2 325 aaKnown RBP9□□□□□ -0.97
RNF43-204ENST00000580014 SPSB2Q99619 263 aa9□□□□□ -0.97
RNF43-204ENST00000580014 MYD88Q99836 296 aa9□□□□□ -0.97
RNF43-204ENST00000580014 DDX19BQ9UMR2 479 aa9□□□□□ -0.97
RNF43-204ENST00000580014 SCN7AQ01118 1682 aa9□□□□□ -0.97
RNF43-204ENST00000580014 UBN2Q6ZU65 1347 aa9□□□□□ -0.97
RNF43-204ENST00000580014 PCCAP05165 728 aaPredicted RBP8.99□□□□□ -0.97
RNF43-204ENST00000580014 MMP16P51512 607 aa8.99□□□□□ -0.97
RNF43-204ENST00000580014 NFIXQ14938 502 aa8.99□□□□□ -0.97
RNF43-204ENST00000580014 CWF19L2Q2TBE0 894 aaKnown RBP8.99□□□□□ -0.97
RNF43-204ENST00000580014 ERICH6BQ5W0A0 696 aa8.99□□□□□ -0.97
RNF43-204ENST00000580014 TBC1D9BQ66K14 1250 aa8.99□□□□□ -0.97
RNF43-204ENST00000580014 SLC4A10Q6U841 1118 aa8.99□□□□□ -0.97
RNF43-204ENST00000580014 CHMP4BQ9H444 224 aaKnown RBP8.99□□□□□ -0.97
RNF43-204ENST00000580014 ZBTB40Q9NUA8 1239 aa8.99□□□□□ -0.97
RNF43-204ENST00000580014 CWC25Q9NXE8 425 aaPredicted RBP8.99□□□□□ -0.97
RNF43-204ENST00000580014 MAP10Q9P2G4 905 aa8.99□□□□□ -0.97
RNF43-204ENST00000580014 BCORQ6W2J9 1755 aa8.99□□□□□ -0.97
RNF43-204ENST00000580014 C4AP0C0L4 1744 aa8.98□□□□□ -0.97
RNF43-204ENST00000580014 ZBBXA8MT70 800 aa8.98□□□□□ -0.97
RNF43-204ENST00000580014 ATP5J2-PTCD1G3V325 749 aa8.98□□□□□ -0.97
RNF43-204ENST00000580014 GRM8O00222 908 aa8.98□□□□□ -0.97
RNF43-204ENST00000580014 NTSR2O95665 410 aa8.98□□□□□ -0.97
RNF43-204ENST00000580014 GNAI3P08754 354 aa8.98□□□□□ -0.97
RNF43-204ENST00000580014 CCNYL3P0C7X3 344 aa8.98□□□□□ -0.97
RNF43-204ENST00000580014 SEMA3FQ13275 785 aa8.98□□□□□ -0.97
RNF43-204ENST00000580014 SLC10A5Q5PT55 438 aa8.98□□□□□ -0.97
RNF43-204ENST00000580014 SUSD4Q5VX71 490 aa8.98□□□□□ -0.97
RNF43-204ENST00000580014 CRBNQ96SW2 442 aa8.98□□□□□ -0.97
RNF43-204ENST00000580014 PLA2G12BQ9BX93 195 aa8.98□□□□□ -0.97
RNF43-204ENST00000580014 PPP1R12CQ9BZL4 782 aa8.98□□□□□ -0.97
RNF43-204ENST00000580014 NIP7Q9Y221 180 aaKnown RBP eCLIP8.98□□□□□ -0.97
RNF43-204ENST00000580014 ARFGEF2Q9Y6D5 1785 aa8.98□□□□□ -0.97
RNF43-204ENST00000580014 CDHR2Q9BYE9 1310 aa8.98□□□□□ -0.97
RNF43-204ENST00000580014 RIC1Q4ADV7 1423 aa8.97□□□□□ -0.97
RNF43-204ENST00000580014 N4BP2Q86UW6 1770 aaPredicted RBP8.97□□□□□ -0.97
RNF43-204ENST00000580014 TUBGCP6Q96RT7 1819 aa8.97□□□□□ -0.97
RNF43-204ENST00000580014 POLRMTO00411 1230 aaKnown RBP8.97□□□□□ -0.97
RNF43-204ENST00000580014 ADH1BP00325 375 aa8.97□□□□□ -0.97
RNF43-204ENST00000580014 NBPF7P0C2Y1 421 aaPredicted RBP8.97□□□□□ -0.97
RNF43-204ENST00000580014 CTHP32929 405 aa8.97□□□□□ -0.97
RNF43-204ENST00000580014 DDR1Q08345 913 aa8.97□□□□□ -0.97
RNF43-204ENST00000580014 PPP1R42Q7Z4L9 355 aa8.97□□□□□ -0.97
RNF43-204ENST00000580014 ITPRIPQ8IWB1 547 aa8.97□□□□□ -0.97
RNF43-204ENST00000580014 ZBTB38Q8NAP3 1195 aaPredicted RBP8.97□□□□□ -0.97
RNF43-204ENST00000580014 PBXIP1Q96AQ6 731 aa8.97□□□□□ -0.97
RNF43-204ENST00000580014 KAZALD1Q96I82 304 aa8.97□□□□□ -0.97
RNF43-204ENST00000580014 SETDB2Q96T68 719 aa8.97□□□□□ -0.97
RNF43-204ENST00000580014 MEIS3Q99687 375 aa8.97□□□□□ -0.97
RNF43-204ENST00000580014 TRAIPQ9BWF2 469 aa8.97□□□□□ -0.97
RNF43-204ENST00000580014 PDGFDQ9GZP0 370 aaPredicted RBP8.97□□□□□ -0.97
RNF43-204ENST00000580014 EVA1BQ9NVM1 165 aa8.97□□□□□ -0.97
RNF43-204ENST00000580014 CARMIL3Q8ND23 1372 aa8.97□□□□□ -0.97
RNF43-204ENST00000580014 KLRG2A4D1S0 409 aaPredicted RBP8.96□□□□□ -0.98
RNF43-204ENST00000580014 FBXO45P0C2W1 286 aa8.96□□□□□ -0.98
RNF43-204ENST00000580014 GPTP24298 496 aa8.96□□□□□ -0.98
RNF43-204ENST00000580014 MTX1Q13505 466 aa8.96□□□□□ -0.98
RNF43-204ENST00000580014 R3HDM1Q15032 1099 aaKnown RBP8.96□□□□□ -0.98
RNF43-204ENST00000580014 EXOC6Q8TAG9 804 aa8.96□□□□□ -0.98
RNF43-204ENST00000580014 UCN2Q96RP3 112 aa8.96□□□□□ -0.98
RNF43-204ENST00000580014 NUDT12Q9BQG2 462 aa8.96□□□□□ -0.98
RNF43-204ENST00000580014 UTP14AQ9BVJ6 771 aaKnown RBP8.96□□□□□ -0.98
RNF43-204ENST00000580014 NYXQ9GZU5 481 aa8.96□□□□□ -0.98
RNF43-204ENST00000580014 PRDM9Q9NQV7 894 aa8.96□□□□□ -0.98
RNF43-204ENST00000580014 HDAC5Q9UQL6 1122 aa8.96□□□□□ -0.98
RNF43-204ENST00000580014 CASZ1Q86V15 1759 aa8.96□□□□□ -0.98
RNF43-204ENST00000580014 COL24A1Q17RW2 1714 aa8.95□□□□□ -0.98
RNF43-204ENST00000580014 SERPINB2P05120 415 aa8.95□□□□□ -0.98
RNF43-204ENST00000580014 CSF1RP07333 972 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms