RNA–Protein interactions for RNA: ENST00000580012.1

NDEL1-207, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-207ENST00000580012 SMARCA5O60264 1052 aaPredicted RBP27.92■■■□□ 2.06
NDEL1-207ENST00000580012 ARID4AP29374 1257 aaPredicted RBP27.92■■■□□ 2.06
NDEL1-207ENST00000580012 GORABQ5T7V8 394 aa27.92■■■□□ 2.06
NDEL1-207ENST00000580012 CERS5Q8N5B7 392 aa27.92■■■□□ 2.06
NDEL1-207ENST00000580012 MXD3Q9BW11 206 aa27.92■■■□□ 2.06
NDEL1-207ENST00000580012 RRAGCQ9HB90 399 aa27.92■■■□□ 2.06
NDEL1-207ENST00000580012 NMRK2Q9NPI5 230 aa27.92■■■□□ 2.06
NDEL1-207ENST00000580012 GPRC5DQ9NZD1 345 aa27.92■■■□□ 2.06
NDEL1-207ENST00000580012 SCN9AQ15858 1988 aa27.91■■■□□ 2.06
NDEL1-207ENST00000580012 VEGFAP15692 232 aaPredicted RBP27.91■■■□□ 2.06
NDEL1-207ENST00000580012 DENND2AQ9ULE3 1009 aa27.91■■■□□ 2.06
NDEL1-207ENST00000580012 PDS5AQ29RF7 1337 aaKnown RBP27.91■■■□□ 2.06
NDEL1-207ENST00000580012 MYO3BQ8WXR4 1341 aa27.91■■■□□ 2.06
NDEL1-207ENST00000580012 UQCRFS1P1P0C7P4 283 aa27.9■■■□□ 2.06
NDEL1-207ENST00000580012 RASGRF1Q13972 1273 aa27.9■■■□□ 2.06
NDEL1-207ENST00000580012 CCDC158Q5M9N0 1113 aa27.9■■■□□ 2.06
NDEL1-207ENST00000580012 IQCA1LA6NCM1 817 aa27.89■■■□□ 2.06
NDEL1-207ENST00000580012 KIF3CO14782 793 aa27.89■■■□□ 2.06
NDEL1-207ENST00000580012 FRAT2O75474 233 aaPredicted RBP27.89■■■□□ 2.06
NDEL1-207ENST00000580012 IFIT2P09913 472 aaKnown RBP27.89■■■□□ 2.06
NDEL1-207ENST00000580012 EPS15P42566 896 aa27.89■■■□□ 2.06
NDEL1-207ENST00000580012 CNOT7Q9UIV1 285 aaKnown RBP27.89■■■□□ 2.06
NDEL1-207ENST00000580012 JAG2Q9Y219 1238 aa27.89■■■□□ 2.06
NDEL1-207ENST00000580012 NEFLP07196 543 aa27.88■■■□□ 2.05
NDEL1-207ENST00000580012 MMP14P50281 582 aa27.88■■■□□ 2.05
NDEL1-207ENST00000580012 ZNF280AP59817 542 aaPredicted RBP27.88■■■□□ 2.05
NDEL1-207ENST00000580012 WDR66Q8TBY9 1149 aa27.88■■■□□ 2.05
NDEL1-207ENST00000580012 TBC1D22AQ8WUA7 517 aa27.88■■■□□ 2.05
NDEL1-207ENST00000580012 FBXW7Q969H0 707 aa27.88■■■□□ 2.05
NDEL1-207ENST00000580012 HMG20BQ9P0W2 317 aa27.88■■■□□ 2.05
NDEL1-207ENST00000580012 HACL1Q9UJ83 578 aa27.88■■■□□ 2.05
NDEL1-207ENST00000580012 WDR90Q96KV7 1748 aa27.87■■■□□ 2.05
NDEL1-207ENST00000580012 CHAF1AQ13111 956 aaPredicted RBP27.87■■■□□ 2.05
NDEL1-207ENST00000580012 SCARF1Q14162 830 aa27.87■■■□□ 2.05
NDEL1-207ENST00000580012 MFSD14BQ5SR56 506 aa27.87■■■□□ 2.05
NDEL1-207ENST00000580012 ANKRD45Q5TZF3 282 aa27.87■■■□□ 2.05
NDEL1-207ENST00000580012 TAF1DQ9H5J8 278 aaPredicted RBP27.87■■■□□ 2.05
NDEL1-207ENST00000580012 COL1A1P02452 1464 aaPredicted RBP27.87■■■□□ 2.05
NDEL1-207ENST00000580012 HSPA6P17066 643 aa27.86■■■□□ 2.05
NDEL1-207ENST00000580012 CEP350Q5VT06 3117 aa27.86■■■□□ 2.05
NDEL1-207ENST00000580012 SALL1Q9NSC2 1324 aa27.86■■■□□ 2.05
NDEL1-207ENST00000580012 SHTN1A0MZ66 631 aa27.85■■■□□ 2.05
NDEL1-207ENST00000580012 USP17L8P0C7I0 530 aa27.85■■■□□ 2.05
NDEL1-207ENST00000580012 LMOD1P29536 600 aaPredicted RBP27.85■■■□□ 2.05
NDEL1-207ENST00000580012 MCAMP43121 646 aa27.85■■■□□ 2.05
NDEL1-207ENST00000580012 TTC39AQ5SRH9 613 aa27.85■■■□□ 2.05
NDEL1-207ENST00000580012 ERICH6BQ5W0A0 696 aa27.85■■■□□ 2.05
NDEL1-207ENST00000580012 MICALL2Q8IY33 904 aa27.85■■■□□ 2.05
NDEL1-207ENST00000580012 SPATA5Q8NB90 893 aa27.85■■■□□ 2.05
NDEL1-207ENST00000580012 SUGT1Q9Y2Z0 365 aa27.85■■■□□ 2.05
NDEL1-207ENST00000580012 ARAP2Q8WZ64 1704 aa27.84■■■□□ 2.05
NDEL1-207ENST00000580012 H7C1D1 291 aa27.84■■■□□ 2.05
NDEL1-207ENST00000580012 EPHX2P34913 555 aa27.84■■■□□ 2.05
NDEL1-207ENST00000580012 C16orf71Q8IYS4 520 aaPredicted RBP27.84■■■□□ 2.05
NDEL1-207ENST00000580012 NUCB1Q02818 461 aa27.83■■■□□ 2.05
NDEL1-207ENST00000580012 GRIK5Q16478 980 aa27.83■■■□□ 2.05
NDEL1-207ENST00000580012 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.83■■■□□ 2.05
NDEL1-207ENST00000580012 ADARB2Q9NS39 739 aaKnown RBP27.83■■■□□ 2.05
NDEL1-207ENST00000580012 PI16Q6UXB8 463 aa27.82■■■□□ 2.04
NDEL1-207ENST00000580012 KIAA0825Q8IV33 1275 aa27.82■■■□□ 2.04
NDEL1-207ENST00000580012 ATP5JP18859 108 aa27.81■■■□□ 2.04
NDEL1-207ENST00000580012 USP50Q70EL3 339 aaPredicted RBP27.81■■■□□ 2.04
NDEL1-207ENST00000580012 MRIQ9BWK5 157 aa27.81■■■□□ 2.04
NDEL1-207ENST00000580012 PNMA8AQ86V59 439 aaPredicted RBP27.8■■■□□ 2.04
NDEL1-207ENST00000580012 OGFOD1Q8N543 542 aa27.8■■■□□ 2.04
NDEL1-207ENST00000580012 SALL3Q9BXA9 1300 aa27.8■■■□□ 2.04
NDEL1-207ENST00000580012 PSME4Q14997 1843 aa27.79■■■□□ 2.04
NDEL1-207ENST00000580012 HIRAP54198 1017 aaPredicted RBP27.79■■■□□ 2.04
NDEL1-207ENST00000580012 B4GALNT3Q6L9W6 998 aa27.79■■■□□ 2.04
NDEL1-207ENST00000580012 SAMD7Q7Z3H4 446 aa27.79■■■□□ 2.04
NDEL1-207ENST00000580012 CHD1LQ86WJ1 897 aa27.79■■■□□ 2.04
NDEL1-207ENST00000580012 OTUD7AQ8TE49 926 aaPredicted RBP27.79■■■□□ 2.04
NDEL1-207ENST00000580012 BCL11AQ9H165 835 aa27.79■■■□□ 2.04
NDEL1-207ENST00000580012 ECHDC1Q9NTX5 307 aa27.79■■■□□ 2.04
NDEL1-207ENST00000580012 ZNF646O15015 1829 aaPredicted RBP27.78■■■□□ 2.04
NDEL1-207ENST00000580012 EGFRP00533 1210 aa27.78■■■□□ 2.04
NDEL1-207ENST00000580012 ZGPATQ8N5A5 531 aaKnown RBP27.78■■■□□ 2.04
NDEL1-207ENST00000580012 ZBED3Q96IU2 234 aaPredicted RBP27.78■■■□□ 2.04
NDEL1-207ENST00000580012 SNRKQ9NRH2 765 aa27.78■■■□□ 2.04
NDEL1-207ENST00000580012 HDAC9Q9UKV0 1011 aa27.78■■■□□ 2.04
NDEL1-207ENST00000580012 CYP2E1P05181 493 aaPredicted RBP27.77■■■□□ 2.04
NDEL1-207ENST00000580012 ZAP70P43403 619 aa27.77■■■□□ 2.04
NDEL1-207ENST00000580012 HDLBPQ00341 1268 aaKnown RBP27.77■■■□□ 2.04
NDEL1-207ENST00000580012 MTMR14Q8NCE2 650 aa27.77■■■□□ 2.04
NDEL1-207ENST00000580012 TRPM4Q8TD43 1214 aa27.77■■■□□ 2.04
NDEL1-207ENST00000580012 MYOZ2Q9NPC6 264 aa27.77■■■□□ 2.04
NDEL1-207ENST00000580012 ZBTB47Q9UFB7 747 aaPredicted RBP27.77■■■□□ 2.04
NDEL1-207ENST00000580012 PGAP2Q9UHJ9 254 aa27.77■■■□□ 2.04
NDEL1-207ENST00000580012 TTF2Q9UNY4 1162 aaKnown RBP27.77■■■□□ 2.04
NDEL1-207ENST00000580012 F8W031 263 aaPredicted RBP27.76■■■□□ 2.03
NDEL1-207ENST00000580012 PRDX5P30044 214 aa27.76■■■□□ 2.03
NDEL1-207ENST00000580012 TBC1D9Q6ZT07 1266 aa27.76■■■□□ 2.03
NDEL1-207ENST00000580012 LNPKQ9C0E8 428 aa27.76■■■□□ 2.03
NDEL1-207ENST00000580012 STAP2Q9UGK3 403 aa27.76■■■□□ 2.03
NDEL1-207ENST00000580012 IGSF3O75054 1194 aa27.75■■■□□ 2.03
NDEL1-207ENST00000580012 TOMM70O94826 608 aa27.75■■■□□ 2.03
NDEL1-207ENST00000580012 TBC1D10BQ4KMP7 808 aaPredicted RBP27.75■■■□□ 2.03
NDEL1-207ENST00000580012 SPTY2D1Q68D10 685 aaPredicted RBP27.75■■■□□ 2.03
NDEL1-207ENST00000580012 SERPINA10Q9UK55 444 aa27.75■■■□□ 2.03
NDEL1-207ENST00000580012 SCN4AP35499 1836 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms