RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 ZNF526Q8TF50 670 aaPredicted RBP19.07■□□□□ 0.64
SLC6A4-205ENST00000579221 MYO3BQ8WXR4 1341 aa19.06■□□□□ 0.64
SLC6A4-205ENST00000579221 TBC1D22AQ8WUA7 517 aa19.06■□□□□ 0.64
SLC6A4-205ENST00000579221 DPF2Q92785 391 aa19.06■□□□□ 0.64
SLC6A4-205ENST00000579221 L3MBTL3Q96JM7 780 aaPredicted RBP19.06■□□□□ 0.64
SLC6A4-205ENST00000579221 ZNF512BQ96KM6 892 aaPredicted RBP19.06■□□□□ 0.64
SLC6A4-205ENST00000579221 TLR7Q9NYK1 1049 aaKnown RBP19.06■□□□□ 0.64
SLC6A4-205ENST00000579221 ZBTB12Q9Y330 459 aaPredicted RBP19.06■□□□□ 0.64
SLC6A4-205ENST00000579221 TIAM2Q8IVF5 1701 aa19.05■□□□□ 0.64
SLC6A4-205ENST00000579221 ARID4AP29374 1257 aaPredicted RBP19.05■□□□□ 0.64
SLC6A4-205ENST00000579221 LMOD1P29536 600 aaPredicted RBP19.05■□□□□ 0.64
SLC6A4-205ENST00000579221 GMPSP49915 693 aaPredicted RBP19.05■□□□□ 0.64
SLC6A4-205ENST00000579221 B4GALNT3Q6L9W6 998 aa19.05■□□□□ 0.64
SLC6A4-205ENST00000579221 WDR66Q8TBY9 1149 aa19.05■□□□□ 0.64
SLC6A4-205ENST00000579221 RRAGCQ9HB90 399 aa19.05■□□□□ 0.64
SLC6A4-205ENST00000579221 IQCA1LA6NCM1 817 aa19.04■□□□□ 0.64
SLC6A4-205ENST00000579221 MXD3Q9BW11 206 aa19.04■□□□□ 0.64
SLC6A4-205ENST00000579221 GPBP1L1Q9HC44 474 aaPredicted RBP19.04■□□□□ 0.64
SLC6A4-205ENST00000579221 JAG2Q9Y219 1238 aa19.04■□□□□ 0.64
SLC6A4-205ENST00000579221 H7C1D1 291 aa19.03■□□□□ 0.64
SLC6A4-205ENST00000579221 VEGFAP15692 232 aaPredicted RBP19.03■□□□□ 0.64
SLC6A4-205ENST00000579221 MMP14P50281 582 aa19.03■□□□□ 0.64
SLC6A4-205ENST00000579221 NUCB1Q02818 461 aa19.03■□□□□ 0.64
SLC6A4-205ENST00000579221 RASGRF1Q13972 1273 aa19.03■□□□□ 0.64
SLC6A4-205ENST00000579221 MFSD14BQ5SR56 506 aa19.03■□□□□ 0.64
SLC6A4-205ENST00000579221 C16orf71Q8IYS4 520 aaPredicted RBP19.03■□□□□ 0.64
SLC6A4-205ENST00000579221 SPATA5Q8NB90 893 aa19.03■□□□□ 0.64
SLC6A4-205ENST00000579221 GPATCH3Q96I76 525 aa19.03■□□□□ 0.64
SLC6A4-205ENST00000579221 CCDC136Q96JN2 1154 aa19.03■□□□□ 0.64
SLC6A4-205ENST00000579221 GMLQ99445 158 aa19.03■□□□□ 0.64
SLC6A4-205ENST00000579221 GPRC5DQ9NZD1 345 aa19.03■□□□□ 0.64
SLC6A4-205ENST00000579221 HMG20BQ9P0W2 317 aa19.03■□□□□ 0.64
SLC6A4-205ENST00000579221 CNOT7Q9UIV1 285 aaKnown RBP19.03■□□□□ 0.64
SLC6A4-205ENST00000579221 PDS5AQ29RF7 1337 aaKnown RBP19.02■□□□□ 0.64
SLC6A4-205ENST00000579221 CHD1LQ86WJ1 897 aa19.02■□□□□ 0.64
SLC6A4-205ENST00000579221 ZGPATQ8N5A5 531 aaKnown RBP19.02■□□□□ 0.64
SLC6A4-205ENST00000579221 HACL1Q9UJ83 578 aa19.02■□□□□ 0.64
SLC6A4-205ENST00000579221 POTECB2RU33 542 aa19.01■□□□□ 0.63
SLC6A4-205ENST00000579221 USP17L8P0C7I0 530 aa19.01■□□□□ 0.63
SLC6A4-205ENST00000579221 MCAMP43121 646 aa19.01■□□□□ 0.63
SLC6A4-205ENST00000579221 SCNN1DP51172 638 aa19.01■□□□□ 0.63
SLC6A4-205ENST00000579221 OGFOD1Q8N543 542 aa19.01■□□□□ 0.63
SLC6A4-205ENST00000579221 ZNF784Q8NCA9 323 aaPredicted RBP19.01■□□□□ 0.63
SLC6A4-205ENST00000579221 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.01■□□□□ 0.63
SLC6A4-205ENST00000579221 LNPKQ9C0E8 428 aa19.01■□□□□ 0.63
SLC6A4-205ENST00000579221 ECHDC1Q9NTX5 307 aa19.01■□□□□ 0.63
SLC6A4-205ENST00000579221 PPP4R2Q9NY27 417 aa19.01■□□□□ 0.63
SLC6A4-205ENST00000579221 HDAC9Q9UKV0 1011 aa19.01■□□□□ 0.63
SLC6A4-205ENST00000579221 SUGT1Q9Y2Z0 365 aa19.01■□□□□ 0.63
SLC6A4-205ENST00000579221 ATP5JP18859 108 aa19■□□□□ 0.63
SLC6A4-205ENST00000579221 EPS15P42566 896 aa19■□□□□ 0.63
SLC6A4-205ENST00000579221 SCARF1Q14162 830 aa19■□□□□ 0.63
SLC6A4-205ENST00000579221 SPTY2D1Q68D10 685 aaPredicted RBP19■□□□□ 0.63
SLC6A4-205ENST00000579221 KIAA0825Q8IV33 1275 aa19■□□□□ 0.63
SLC6A4-205ENST00000579221 MICALL2Q8IY33 904 aa19■□□□□ 0.63
SLC6A4-205ENST00000579221 CERS5Q8N5B7 392 aa19■□□□□ 0.63
SLC6A4-205ENST00000579221 NMRK2Q9NPI5 230 aa19■□□□□ 0.63
SLC6A4-205ENST00000579221 SNRKQ9NRH2 765 aa19■□□□□ 0.63
SLC6A4-205ENST00000579221 UTRNP46939 3433 aa19■□□□□ 0.63
SLC6A4-205ENST00000579221 ARAP2Q8WZ64 1704 aa19■□□□□ 0.63
SLC6A4-205ENST00000579221 SALL1Q9NSC2 1324 aa19■□□□□ 0.63
SLC6A4-205ENST00000579221 CENPQQ7L2Z9 268 aaPredicted RBP18.99■□□□□ 0.63
SLC6A4-205ENST00000579221 ADARB2Q9NS39 739 aaKnown RBP18.99■□□□□ 0.63
SLC6A4-205ENST00000579221 F8W031 263 aaPredicted RBP18.98■□□□□ 0.63
SLC6A4-205ENST00000579221 LDHBP07195 334 aaKnown RBP18.98■□□□□ 0.63
SLC6A4-205ENST00000579221 EPHX2P34913 555 aa18.98■□□□□ 0.63
SLC6A4-205ENST00000579221 ZAP70P43403 619 aa18.98■□□□□ 0.63
SLC6A4-205ENST00000579221 ZNF280AP59817 542 aaPredicted RBP18.98■□□□□ 0.63
SLC6A4-205ENST00000579221 TAF1DQ9H5J8 278 aaPredicted RBP18.98■□□□□ 0.63
SLC6A4-205ENST00000579221 ABCF2Q9UG63 623 aa18.98■□□□□ 0.63
SLC6A4-205ENST00000579221 TTF2Q9UNY4 1162 aaKnown RBP18.98■□□□□ 0.63
SLC6A4-205ENST00000579221 SCN9AQ15858 1988 aa18.98■□□□□ 0.63
SLC6A4-205ENST00000579221 TTC41PQ6P2S7 1318 aa18.98■□□□□ 0.63
SLC6A4-205ENST00000579221 ERC2O15083 957 aa18.97■□□□□ 0.63
SLC6A4-205ENST00000579221 MX1P20591 662 aa18.97■□□□□ 0.63
SLC6A4-205ENST00000579221 PI16Q6UXB8 463 aa18.97■□□□□ 0.63
SLC6A4-205ENST00000579221 ERICH6Q7L0X2 663 aa18.97■□□□□ 0.63
SLC6A4-205ENST00000579221 PNMA8AQ86V59 439 aaPredicted RBP18.97■□□□□ 0.63
SLC6A4-205ENST00000579221 BOLA2Q9H3K6 86 aa18.97■□□□□ 0.63
SLC6A4-205ENST00000579221 MAST3O60307 1309 aa18.97■□□□□ 0.63
SLC6A4-205ENST00000579221 WDR90Q96KV7 1748 aa18.97■□□□□ 0.63
SLC6A4-205ENST00000579221 TTF1Q15361 905 aaPredicted RBP18.96■□□□□ 0.63
SLC6A4-205ENST00000579221 RBM26Q5T8P6 1007 aaKnown RBP18.96■□□□□ 0.63
SLC6A4-205ENST00000579221 USP50Q70EL3 339 aaPredicted RBP18.96■□□□□ 0.63
SLC6A4-205ENST00000579221 OTUD7AQ8TE49 926 aaPredicted RBP18.96■□□□□ 0.63
SLC6A4-205ENST00000579221 MRIQ9BWK5 157 aa18.96■□□□□ 0.63
SLC6A4-205ENST00000579221 LRP2BPQ9P2M1 347 aa18.96■□□□□ 0.63
SLC6A4-205ENST00000579221 COL1A1P02452 1464 aaPredicted RBP18.96■□□□□ 0.63
SLC6A4-205ENST00000579221 SHTN1A0MZ66 631 aa18.95■□□□□ 0.62
SLC6A4-205ENST00000579221 IGSF3O75054 1194 aa18.95■□□□□ 0.62
SLC6A4-205ENST00000579221 CYP2E1P05181 493 aaPredicted RBP18.95■□□□□ 0.62
SLC6A4-205ENST00000579221 HDLBPQ00341 1268 aaKnown RBP18.95■□□□□ 0.62
SLC6A4-205ENST00000579221 GRIK5Q16478 980 aa18.95■□□□□ 0.62
SLC6A4-205ENST00000579221 TBC1D9Q6ZT07 1266 aa18.95■□□□□ 0.62
SLC6A4-205ENST00000579221 SAMD7Q7Z3H4 446 aa18.95■□□□□ 0.62
SLC6A4-205ENST00000579221 DNAJC2Q99543 621 aaKnown RBP18.95■□□□□ 0.62
SLC6A4-205ENST00000579221 HAUS7Q99871 368 aa18.95■□□□□ 0.62
SLC6A4-205ENST00000579221 MYOZ2Q9NPC6 264 aa18.95■□□□□ 0.62
SLC6A4-205ENST00000579221 STAP2Q9UGK3 403 aa18.95■□□□□ 0.62
SLC6A4-205ENST00000579221 GLRX3O76003 335 aaKnown RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms