RNA–Protein interactions for RNA: ENST00000578557.1

PPP4R1-210, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-210ENST00000578557 TTLL5Q6EMB2 1281 aa10.65□□□□□ -0.7
PPP4R1-210ENST00000578557 RSBN1LQ6PCB5 846 aaPredicted RBP10.65□□□□□ -0.7
PPP4R1-210ENST00000578557 VPS37DQ86XT2 251 aa10.65□□□□□ -0.7
PPP4R1-210ENST00000578557 RPAP2Q8IXW5 612 aaPredicted RBP10.65□□□□□ -0.7
PPP4R1-210ENST00000578557 LPIN2Q92539 896 aa10.65□□□□□ -0.7
PPP4R1-210ENST00000578557 MS4A4AQ96JQ5 239 aa10.65□□□□□ -0.7
PPP4R1-210ENST00000578557 GNL3LQ9NVN8 582 aaKnown RBP10.65□□□□□ -0.7
PPP4R1-210ENST00000578557 CNOT7Q9UIV1 285 aaKnown RBP10.65□□□□□ -0.7
PPP4R1-210ENST00000578557 BRCA1P38398 1863 aaKnown RBP10.65□□□□□ -0.7
PPP4R1-210ENST00000578557 ANKRD31Q8N7Z5 1873 aa10.65□□□□□ -0.7
PPP4R1-210ENST00000578557 GOLGB1Q14789 3259 aaKnown RBP10.65□□□□□ -0.7
PPP4R1-210ENST00000578557 SEMA3EO15041 775 aa10.64□□□□□ -0.71
PPP4R1-210ENST00000578557 SCNN1DP51172 638 aa10.64□□□□□ -0.71
PPP4R1-210ENST00000578557 ATP8B2P98198 1209 aa10.64□□□□□ -0.71
PPP4R1-210ENST00000578557 PTPN12Q05209 780 aaKnown RBP10.64□□□□□ -0.71
PPP4R1-210ENST00000578557 CD209Q9NNX6 404 aa10.64□□□□□ -0.71
PPP4R1-210ENST00000578557 SLX4Q8IY92 1834 aa10.63□□□□□ -0.71
PPP4R1-210ENST00000578557 ZNF541Q9H0D2 1346 aa10.63□□□□□ -0.71
PPP4R1-210ENST00000578557 ANKRD36CQ5JPF3 1778 aa10.63□□□□□ -0.71
PPP4R1-210ENST00000578557 ARFGEF2Q9Y6D5 1785 aa10.63□□□□□ -0.71
PPP4R1-210ENST00000578557 YDJCA8MPS7 323 aa10.63□□□□□ -0.71
PPP4R1-210ENST00000578557 PSMD14O00487 310 aa10.63□□□□□ -0.71
PPP4R1-210ENST00000578557 SRGAP3O43295 1099 aa10.63□□□□□ -0.71
PPP4R1-210ENST00000578557 HMMRO75330 724 aa10.63□□□□□ -0.71
PPP4R1-210ENST00000578557 RAD17O75943 681 aa10.63□□□□□ -0.71
PPP4R1-210ENST00000578557 USP17L8P0C7I0 530 aa10.63□□□□□ -0.71
PPP4R1-210ENST00000578557 SLC5A1P13866 664 aa10.63□□□□□ -0.71
PPP4R1-210ENST00000578557 GMPSP49915 693 aaPredicted RBP10.63□□□□□ -0.71
PPP4R1-210ENST00000578557 ZNF280AP59817 542 aaPredicted RBP10.63□□□□□ -0.71
PPP4R1-210ENST00000578557 G3BP1Q13283 466 aaKnown RBP eCLIP10.63□□□□□ -0.71
PPP4R1-210ENST00000578557 TMED8Q6PL24 325 aaPredicted RBP10.63□□□□□ -0.71
PPP4R1-210ENST00000578557 CDC37L1Q7L3B6 337 aa10.63□□□□□ -0.71
PPP4R1-210ENST00000578557 ITPRIPQ8IWB1 547 aa10.63□□□□□ -0.71
PPP4R1-210ENST00000578557 DBNDD1Q9H9R9 158 aa10.63□□□□□ -0.71
PPP4R1-210ENST00000578557 GPR108Q9NPR9 543 aa10.63□□□□□ -0.71
PPP4R1-210ENST00000578557 LRRFIP2Q9Y608 721 aaKnown RBP10.63□□□□□ -0.71
PPP4R1-210ENST00000578557 POTEB2H3BUK9 544 aa10.62□□□□□ -0.71
PPP4R1-210ENST00000578557 RFX5P48382 616 aaPredicted RBP10.62□□□□□ -0.71
PPP4R1-210ENST00000578557 HDLBPQ00341 1268 aaKnown RBP10.62□□□□□ -0.71
PPP4R1-210ENST00000578557 DOK7Q18PE1 504 aa10.62□□□□□ -0.71
PPP4R1-210ENST00000578557 FBXO33Q7Z6M2 555 aa10.62□□□□□ -0.71
PPP4R1-210ENST00000578557 ERC1Q8IUD2 1116 aa10.62□□□□□ -0.71
PPP4R1-210ENST00000578557 ZGPATQ8N5A5 531 aaKnown RBP10.62□□□□□ -0.71
PPP4R1-210ENST00000578557 TMEM57Q8N5G2 664 aa10.62□□□□□ -0.71
PPP4R1-210ENST00000578557 TDRD7Q8NHU6 1098 aaKnown RBP10.62□□□□□ -0.71
PPP4R1-210ENST00000578557 CLUAP1Q96AJ1 413 aa10.62□□□□□ -0.71
PPP4R1-210ENST00000578557 GMLQ99445 158 aa10.62□□□□□ -0.71
PPP4R1-210ENST00000578557 MEIS3Q99687 375 aa10.62□□□□□ -0.71
PPP4R1-210ENST00000578557 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.62□□□□□ -0.71
PPP4R1-210ENST00000578557 FAM205AQ6ZU69 1335 aa10.61□□□□□ -0.71
PPP4R1-210ENST00000578557 PITPNM2Q9BZ72 1349 aa10.61□□□□□ -0.71
PPP4R1-210ENST00000578557 FRAT2O75474 233 aaPredicted RBP10.61□□□□□ -0.71
PPP4R1-210ENST00000578557 EPS15P42566 896 aa10.61□□□□□ -0.71
PPP4R1-210ENST00000578557 MVPQ14764 893 aaKnown RBP10.61□□□□□ -0.71
PPP4R1-210ENST00000578557 EAPPQ56P03 285 aaPredicted RBP10.61□□□□□ -0.71
PPP4R1-210ENST00000578557 DACT2Q5SW24 774 aa10.61□□□□□ -0.71
PPP4R1-210ENST00000578557 LHX8Q68G74 356 aa10.61□□□□□ -0.71
PPP4R1-210ENST00000578557 MICALL2Q8IY33 904 aa10.61□□□□□ -0.71
PPP4R1-210ENST00000578557 CNTROBQ8N137 903 aa10.61□□□□□ -0.71
PPP4R1-210ENST00000578557 MTMR14Q8NCE2 650 aa10.61□□□□□ -0.71
PPP4R1-210ENST00000578557 WDR66Q8TBY9 1149 aa10.61□□□□□ -0.71
PPP4R1-210ENST00000578557 SSH3Q8TE77 659 aa10.61□□□□□ -0.71
PPP4R1-210ENST00000578557 DCPSQ96C86 337 aaKnown RBP10.61□□□□□ -0.71
PPP4R1-210ENST00000578557 NOP58Q9Y2X3 529 aaKnown RBP10.61□□□□□ -0.71
PPP4R1-210ENST00000578557 MAST3O60307 1309 aa10.6□□□□□ -0.71
PPP4R1-210ENST00000578557 TNRC6CQ9HCJ0 1690 aaKnown RBP10.6□□□□□ -0.71
PPP4R1-210ENST00000578557 FER1L6Q2WGJ9 1857 aa10.6□□□□□ -0.71
PPP4R1-210ENST00000578557 UNCXA6NJT0 531 aa10.6□□□□□ -0.71
PPP4R1-210ENST00000578557 MYO1BO43795 1136 aa10.6□□□□□ -0.71
PPP4R1-210ENST00000578557 PLIN1O60240 522 aa10.6□□□□□ -0.71
PPP4R1-210ENST00000578557 TAF5LO75529 589 aa10.6□□□□□ -0.71
PPP4R1-210ENST00000578557 FGFR2P21802 821 aa10.6□□□□□ -0.71
PPP4R1-210ENST00000578557 SLF2Q8IX21 1173 aa10.6□□□□□ -0.71
PPP4R1-210ENST00000578557 VGLL2Q8N8G2 317 aa10.6□□□□□ -0.71
PPP4R1-210ENST00000578557 ZNF594Q96JF6 807 aaPredicted RBP10.6□□□□□ -0.71
PPP4R1-210ENST00000578557 HHIPL1Q96JK4 782 aa10.6□□□□□ -0.71
PPP4R1-210ENST00000578557 FAM84BQ96KN1 310 aaPredicted RBP10.6□□□□□ -0.71
PPP4R1-210ENST00000578557 COL11A2P13942 1736 aaPredicted RBP10.6□□□□□ -0.71
PPP4R1-210ENST00000578557 PDS5AQ29RF7 1337 aaKnown RBP10.59□□□□□ -0.71
PPP4R1-210ENST00000578557 WDR90Q96KV7 1748 aa10.59□□□□□ -0.71
PPP4R1-210ENST00000578557 TMEM88BA6NKF7 163 aa10.59□□□□□ -0.71
PPP4R1-210ENST00000578557 GTPBP6O43824 516 aaPredicted RBP10.59□□□□□ -0.71
PPP4R1-210ENST00000578557 FKBP1BP68106 108 aa10.59□□□□□ -0.71
PPP4R1-210ENST00000578557 GTF2IP78347 998 aa10.59□□□□□ -0.71
PPP4R1-210ENST00000578557 LRRC24Q50LG9 513 aa10.59□□□□□ -0.71
PPP4R1-210ENST00000578557 SPTY2D1Q68D10 685 aaPredicted RBP10.59□□□□□ -0.71
PPP4R1-210ENST00000578557 ATG9AQ7Z3C6 839 aa10.59□□□□□ -0.71
PPP4R1-210ENST00000578557 HELBQ8NG08 1087 aaPredicted RBP10.59□□□□□ -0.71
PPP4R1-210ENST00000578557 PUS3Q9BZE2 481 aaKnown RBP10.59□□□□□ -0.71
PPP4R1-210ENST00000578557 MYOZ2Q9NPC6 264 aa10.59□□□□□ -0.71
PPP4R1-210ENST00000578557 SERPINA10Q9UK55 444 aa10.59□□□□□ -0.71
PPP4R1-210ENST00000578557 DENND2AQ9ULE3 1009 aa10.59□□□□□ -0.71
PPP4R1-210ENST00000578557 IRS2Q9Y4H2 1338 aa10.58□□□□□ -0.71
PPP4R1-210ENST00000578557 RAB11FIP3O75154 756 aa10.58□□□□□ -0.72
PPP4R1-210ENST00000578557 MAP4K4O95819 1239 aaPredicted RBP10.58□□□□□ -0.72
PPP4R1-210ENST00000578557 ITGBL1O95965 494 aaPredicted RBP10.58□□□□□ -0.72
PPP4R1-210ENST00000578557 ATP2B3Q16720 1220 aa10.58□□□□□ -0.72
PPP4R1-210ENST00000578557 SULF1Q8IWU6 871 aa10.58□□□□□ -0.72
PPP4R1-210ENST00000578557 ZBTB40Q9NUA8 1239 aa10.58□□□□□ -0.72
PPP4R1-210ENST00000578557 PPP2R3BQ9Y5P8 575 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms