RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 NEUROD6Q96NK8 337 aa26.82■■□□□ 1.88
CDC42EP4-203ENST00000578516 IL1RAPL2Q9NP60 686 aa26.82■■□□□ 1.88
CDC42EP4-203ENST00000578516 HMMRO75330 724 aa26.81■■□□□ 1.88
CDC42EP4-203ENST00000578516 TBC1D10BQ4KMP7 808 aaPredicted RBP26.81■■□□□ 1.88
CDC42EP4-203ENST00000578516 TNNI3KQ59H18 835 aa26.81■■□□□ 1.88
CDC42EP4-203ENST00000578516 KIAA0825Q8IV33 1275 aa26.81■■□□□ 1.88
CDC42EP4-203ENST00000578516 FPGT-TNNI3KV9GXZ4 949 aa26.81■■□□□ 1.88
CDC42EP4-203ENST00000578516 MYO5AQ9Y4I1 1855 aaKnown RBP26.81■■□□□ 1.88
CDC42EP4-203ENST00000578516 AKAP11Q9UKA4 1901 aa26.8■■□□□ 1.88
CDC42EP4-203ENST00000578516 F8W031 263 aaPredicted RBP26.8■■□□□ 1.88
CDC42EP4-203ENST00000578516 HIRAP54198 1017 aaPredicted RBP26.8■■□□□ 1.88
CDC42EP4-203ENST00000578516 RBM26Q5T8P6 1007 aaKnown RBP26.8■■□□□ 1.88
CDC42EP4-203ENST00000578516 DBNDD2Q9BQY9 259 aa26.8■■□□□ 1.88
CDC42EP4-203ENST00000578516 CCDC102BQ68D86 513 aa26.79■■□□□ 1.88
CDC42EP4-203ENST00000578516 DPF2Q92785 391 aa26.79■■□□□ 1.88
CDC42EP4-203ENST00000578516 ASTN2O75129 1339 aaPredicted RBP26.79■■□□□ 1.88
CDC42EP4-203ENST00000578516 FAM205AQ6ZU69 1335 aa26.79■■□□□ 1.88
CDC42EP4-203ENST00000578516 TOMM70O94826 608 aa26.78■■□□□ 1.88
CDC42EP4-203ENST00000578516 RPS12P25398 132 aaKnown RBP26.78■■□□□ 1.88
CDC42EP4-203ENST00000578516 AGBL3Q8NEM8 1001 aa26.78■■□□□ 1.88
CDC42EP4-203ENST00000578516 EAF2Q96CJ1 260 aaPredicted RBP26.78■■□□□ 1.88
CDC42EP4-203ENST00000578516 CCDC8Q9H0W5 538 aaPredicted RBP26.78■■□□□ 1.88
CDC42EP4-203ENST00000578516 ADARB2Q9NS39 739 aaKnown RBP26.78■■□□□ 1.88
CDC42EP4-203ENST00000578516 AKAP2Q9Y2D5 859 aa26.78■■□□□ 1.88
CDC42EP4-203ENST00000578516 PCDHAC2Q9Y5I4 1007 aa26.78■■□□□ 1.88
CDC42EP4-203ENST00000578516 FRAT2O75474 233 aaPredicted RBP26.77■■□□□ 1.88
CDC42EP4-203ENST00000578516 RHPN1Q8TCX5 695 aa26.77■■□□□ 1.88
CDC42EP4-203ENST00000578516 H7C1D1 291 aa26.76■■□□□ 1.87
CDC42EP4-203ENST00000578516 SMARCA5O60264 1052 aaPredicted RBP26.76■■□□□ 1.87
CDC42EP4-203ENST00000578516 SCARF1Q14162 830 aa26.76■■□□□ 1.87
CDC42EP4-203ENST00000578516 PI16Q6UXB8 463 aa26.76■■□□□ 1.87
CDC42EP4-203ENST00000578516 DBNLQ9UJU6 430 aaKnown RBP26.76■■□□□ 1.87
CDC42EP4-203ENST00000578516 CLEC11AQ9Y240 323 aa26.76■■□□□ 1.87
CDC42EP4-203ENST00000578516 ECM29Q5VYK3 1845 aa26.76■■□□□ 1.87
CDC42EP4-203ENST00000578516 USP17L8P0C7I0 530 aa26.75■■□□□ 1.87
CDC42EP4-203ENST00000578516 KIF4BQ2VIQ3 1234 aa26.75■■□□□ 1.87
CDC42EP4-203ENST00000578516 MFSD14BQ5SR56 506 aa26.75■■□□□ 1.87
CDC42EP4-203ENST00000578516 RBM46Q8TBY0 533 aaKnown RBP26.75■■□□□ 1.87
CDC42EP4-203ENST00000578516 ZNF280AP59817 542 aaPredicted RBP26.74■■□□□ 1.87
CDC42EP4-203ENST00000578516 C1QTNF8P60827 252 aa26.74■■□□□ 1.87
CDC42EP4-203ENST00000578516 RASGRF1Q13972 1273 aa26.74■■□□□ 1.87
CDC42EP4-203ENST00000578516 MAP1SQ66K74 1059 aaPredicted RBP26.74■■□□□ 1.87
CDC42EP4-203ENST00000578516 LDHDQ86WU2 507 aa26.74■■□□□ 1.87
CDC42EP4-203ENST00000578516 GPR108Q9NPR9 543 aa26.74■■□□□ 1.87
CDC42EP4-203ENST00000578516 AOX1Q06278 1338 aa26.73■■□□□ 1.87
CDC42EP4-203ENST00000578516 MYO3BQ8WXR4 1341 aa26.73■■□□□ 1.87
CDC42EP4-203ENST00000578516 FMR1Q06787 632 aaKnown RBP eCLIP26.73■■□□□ 1.87
CDC42EP4-203ENST00000578516 AACSQ86V21 672 aa26.73■■□□□ 1.87
CDC42EP4-203ENST00000578516 GORABQ5T7V8 394 aa26.72■■□□□ 1.87
CDC42EP4-203ENST00000578516 USP50Q70EL3 339 aaPredicted RBP26.72■■□□□ 1.87
CDC42EP4-203ENST00000578516 ERC1Q8IUD2 1116 aa26.72■■□□□ 1.87
CDC42EP4-203ENST00000578516 SCAF8Q9UPN6 1271 aaKnown RBP26.72■■□□□ 1.87
CDC42EP4-203ENST00000578516 CHADLQ6NUI6 762 aa26.71■■□□□ 1.87
CDC42EP4-203ENST00000578516 DLK2Q6UY11 383 aa26.71■■□□□ 1.87
CDC42EP4-203ENST00000578516 PNMA8AQ86V59 439 aaPredicted RBP26.71■■□□□ 1.87
CDC42EP4-203ENST00000578516 SMC1BQ8NDV3 1235 aa26.71■■□□□ 1.87
CDC42EP4-203ENST00000578516 KIF1BPQ96EK5 621 aa26.71■■□□□ 1.87
CDC42EP4-203ENST00000578516 MYOZ2Q9NPC6 264 aa26.71■■□□□ 1.87
CDC42EP4-203ENST00000578516 HSP90AB4PQ58FF6 505 aa26.7■■□□□ 1.86
CDC42EP4-203ENST00000578516 MYH2Q9UKX2 1941 aa26.7■■□□□ 1.86
CDC42EP4-203ENST00000578516 MCAMP43121 646 aa26.69■■□□□ 1.86
CDC42EP4-203ENST00000578516 DCTPP1Q9H773 170 aa26.69■■□□□ 1.86
CDC42EP4-203ENST00000578516 SNRKQ9NRH2 765 aa26.69■■□□□ 1.86
CDC42EP4-203ENST00000578516 HMG20BQ9P0W2 317 aa26.69■■□□□ 1.86
CDC42EP4-203ENST00000578516 TTF2Q9UNY4 1162 aaKnown RBP26.69■■□□□ 1.86
CDC42EP4-203ENST00000578516 ARID4AP29374 1257 aaPredicted RBP26.68■■□□□ 1.86
CDC42EP4-203ENST00000578516 FKBP1AP62942 108 aaKnown RBP26.68■■□□□ 1.86
CDC42EP4-203ENST00000578516 NBPF9Q3BBW0 867 aa26.68■■□□□ 1.86
CDC42EP4-203ENST00000578516 GNL3LQ9NVN8 582 aaKnown RBP26.68■■□□□ 1.86
CDC42EP4-203ENST00000578516 NDUFB9Q9Y6M9 179 aa26.68■■□□□ 1.86
CDC42EP4-203ENST00000578516 TRPM7Q96QT4 1865 aa26.68■■□□□ 1.86
CDC42EP4-203ENST00000578516 RAB11FIP3O75154 756 aa26.67■■□□□ 1.86
CDC42EP4-203ENST00000578516 PRDX5P30044 214 aa26.67■■□□□ 1.86
CDC42EP4-203ENST00000578516 TTC39AQ5SRH9 613 aa26.67■■□□□ 1.86
CDC42EP4-203ENST00000578516 GGA3Q9NZ52 723 aa26.67■■□□□ 1.86
CDC42EP4-203ENST00000578516 MAST2Q6P0Q8 1798 aa26.66■■□□□ 1.86
CDC42EP4-203ENST00000578516 TRAF5O00463 557 aa26.66■■□□□ 1.86
CDC42EP4-203ENST00000578516 GLIS2Q9BZE0 524 aaPredicted RBP26.66■■□□□ 1.86
CDC42EP4-203ENST00000578516 DENND2AQ9ULE3 1009 aa26.66■■□□□ 1.86
CDC42EP4-203ENST00000578516 DOCK2Q92608 1830 aa26.65■■□□□ 1.86
CDC42EP4-203ENST00000578516 CFAP100Q494V2 611 aa26.65■■□□□ 1.86
CDC42EP4-203ENST00000578516 TBC1D9Q6ZT07 1266 aa26.65■■□□□ 1.86
CDC42EP4-203ENST00000578516 LRRCC1Q9C099 1032 aa26.65■■□□□ 1.86
CDC42EP4-203ENST00000578516 ADM5C9JUS6 153 aa26.64■■□□□ 1.86
CDC42EP4-203ENST00000578516 WNT10BO00744 389 aa26.64■■□□□ 1.86
CDC42EP4-203ENST00000578516 SEMA3EO15041 775 aa26.64■■□□□ 1.86
CDC42EP4-203ENST00000578516 FSTL1Q12841 308 aa26.64■■□□□ 1.86
CDC42EP4-203ENST00000578516 CNTROBQ8N137 903 aa26.64■■□□□ 1.86
CDC42EP4-203ENST00000578516 CLASRPQ8N2M8 674 aaKnown RBP26.64■■□□□ 1.86
CDC42EP4-203ENST00000578516 OGFOD1Q8N543 542 aa26.64■■□□□ 1.86
CDC42EP4-203ENST00000578516 WDR66Q8TBY9 1149 aa26.64■■□□□ 1.86
CDC42EP4-203ENST00000578516 TBC1D22AQ8WUA7 517 aa26.64■■□□□ 1.86
CDC42EP4-203ENST00000578516 HDAC9Q9UKV0 1011 aa26.64■■□□□ 1.86
CDC42EP4-203ENST00000578516 ITGBL1O95965 494 aaPredicted RBP26.63■■□□□ 1.85
CDC42EP4-203ENST00000578516 IGHDP01880 384 aa26.63■■□□□ 1.85
CDC42EP4-203ENST00000578516 HTRA3P83110 453 aa26.63■■□□□ 1.85
CDC42EP4-203ENST00000578516 ANGEL2Q5VTE6 544 aaKnown RBP26.63■■□□□ 1.85
CDC42EP4-203ENST00000578516 SPATA5Q8NB90 893 aa26.63■■□□□ 1.85
CDC42EP4-203ENST00000578516 ZBED3Q96IU2 234 aaPredicted RBP26.63■■□□□ 1.85
CDC42EP4-203ENST00000578516 DIXDC1Q155Q3 683 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms