RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 BCCIPQ9P287 314 aaKnown RBP eCLIP13.76□□□□□ -0.21
ERBB2-206ENST00000578373 GPAA1O43292 621 aa13.76□□□□□ -0.21
ERBB2-206ENST00000578373 AKR1B10O60218 316 aa13.76□□□□□ -0.21
ERBB2-206ENST00000578373 TAF5LO75529 589 aa13.76□□□□□ -0.21
ERBB2-206ENST00000578373 TRMT44Q8IYL2 757 aaKnown RBP13.76□□□□□ -0.21
ERBB2-206ENST00000578373 SMARCC1Q92922 1105 aaPredicted RBP13.76□□□□□ -0.21
ERBB2-206ENST00000578373 TCP11L1Q9NUJ3 509 aa13.76□□□□□ -0.21
ERBB2-206ENST00000578373 PPP1R1BQ9UD71 204 aaPredicted RBP13.76□□□□□ -0.21
ERBB2-206ENST00000578373 GUCA1BQ9UMX6 200 aa13.76□□□□□ -0.21
ERBB2-206ENST00000578373 C6orf229H3BNL8 230 aa13.76□□□□□ -0.21
ERBB2-206ENST00000578373 HLTFQ14527 1009 aaKnown RBP eCLIP13.76□□□□□ -0.21
ERBB2-206ENST00000578373 ESR2Q92731 530 aa13.76□□□□□ -0.21
ERBB2-206ENST00000578373 SIRT1Q96EB6 747 aa13.76□□□□□ -0.21
ERBB2-206ENST00000578373 XAGE2Q96GT9 111 aa13.76□□□□□ -0.21
ERBB2-206ENST00000578373 KAT14Q9H8E8 782 aa13.76□□□□□ -0.21
ERBB2-206ENST00000578373 ZNF652Q9Y2D9 606 aa13.76□□□□□ -0.21
ERBB2-206ENST00000578373 METP08581 1390 aa13.75□□□□□ -0.21
ERBB2-206ENST00000578373 MCM7P33993 719 aa13.75□□□□□ -0.21
ERBB2-206ENST00000578373 ARID5AQ03989 594 aa13.75□□□□□ -0.21
ERBB2-206ENST00000578373 ZNF174Q15697 407 aa13.75□□□□□ -0.21
ERBB2-206ENST00000578373 CCDC113Q9H0I3 377 aa13.75□□□□□ -0.21
ERBB2-206ENST00000578373 GBP3Q9H0R5 595 aa13.75□□□□□ -0.21
ERBB2-206ENST00000578373 NIP7Q9Y221 180 aaKnown RBP eCLIP13.75□□□□□ -0.214e-6■□□□□ 10.9
ERBB2-206ENST00000578373 IBTKQ9P2D0 1353 aaPredicted RBP13.75□□□□□ -0.21
ERBB2-206ENST00000578373 ZNF202O95125 648 aa13.75□□□□□ -0.21
ERBB2-206ENST00000578373 UQCRFS1P1P0C7P4 283 aa13.75□□□□□ -0.21
ERBB2-206ENST00000578373 ZNF853P0CG23 659 aa13.75□□□□□ -0.21
ERBB2-206ENST00000578373 ZAP70P43403 619 aa13.75□□□□□ -0.21
ERBB2-206ENST00000578373 LONRF3Q496Y0 759 aa13.75□□□□□ -0.21
ERBB2-206ENST00000578373 ZNF569Q5MCW4 686 aa13.75□□□□□ -0.21
ERBB2-206ENST00000578373 ANO1Q5XXA6 986 aa13.75□□□□□ -0.21
ERBB2-206ENST00000578373 CCDC24Q8N4L8 307 aa13.75□□□□□ -0.21
ERBB2-206ENST00000578373 DCAF5Q96JK2 942 aa13.75□□□□□ -0.21
ERBB2-206ENST00000578373 LSG1Q9H089 658 aaKnown RBP13.75□□□□□ -0.21
ERBB2-206ENST00000578373 KCNJ14Q9UNX9 436 aa13.75□□□□□ -0.21
ERBB2-206ENST00000578373 KIAA0232Q92628 1395 aa13.75□□□□□ -0.21
ERBB2-206ENST00000578373 VWA3AA6NCI4 1184 aa13.75□□□□□ -0.21
ERBB2-206ENST00000578373 HSPA2P54652 639 aa13.75□□□□□ -0.21
ERBB2-206ENST00000578373 HEATR3Q7Z4Q2 680 aa13.75□□□□□ -0.21
ERBB2-206ENST00000578373 CARD6Q9BX69 1037 aa13.75□□□□□ -0.21
ERBB2-206ENST00000578373 ARMT1Q9H993 441 aa13.75□□□□□ -0.21
ERBB2-206ENST00000578373 MYL5Q02045 173 aa13.74□□□□□ -0.21
ERBB2-206ENST00000578373 CALCOCO1Q9P1Z2 691 aa13.74□□□□□ -0.21
ERBB2-206ENST00000578373 F8W031 263 aaPredicted RBP13.74□□□□□ -0.21
ERBB2-206ENST00000578373 POLR2DO15514 142 aaKnown RBP13.74□□□□□ -0.21
ERBB2-206ENST00000578373 RDXP35241 583 aaKnown RBP13.74□□□□□ -0.21
ERBB2-206ENST00000578373 ADD1P35611 737 aaKnown RBP13.74□□□□□ -0.21
ERBB2-206ENST00000578373 PAFAH1B1P43034 410 aa13.74□□□□□ -0.21
ERBB2-206ENST00000578373 ZNF589Q86UQ0 364 aaPredicted RBP13.74□□□□□ -0.21
ERBB2-206ENST00000578373 STAT6P42226 847 aa13.74□□□□□ -0.21
ERBB2-206ENST00000578373 FANCCQ00597 558 aa13.74□□□□□ -0.21
ERBB2-206ENST00000578373 TBX22Q9Y458 520 aa13.74□□□□□ -0.21
ERBB2-206ENST00000578373 CCDC40Q4G0X9 1142 aa13.74□□□□□ -0.21
ERBB2-206ENST00000578373 NAA16Q6N069 864 aaPredicted RBP13.74□□□□□ -0.21
ERBB2-206ENST00000578373 DZIP3Q86Y13 1208 aaKnown RBP13.74□□□□□ -0.21
ERBB2-206ENST00000578373 CDC5LQ99459 802 aaKnown RBP13.74□□□□□ -0.21
ERBB2-206ENST00000578373 SRRTQ9BXP5 876 aaKnown RBP13.74□□□□□ -0.21
ERBB2-206ENST00000578373 KRT23Q9C075 422 aa13.74□□□□□ -0.21
ERBB2-206ENST00000578373 SAMD9LQ8IVG5 1584 aa13.74□□□□□ -0.21
ERBB2-206ENST00000578373 PLEKHG3A1L390 1219 aa13.73□□□□□ -0.21
ERBB2-206ENST00000578373 NEURL1BA8MQ27 555 aa13.73□□□□□ -0.21
ERBB2-206ENST00000578373 E7EWF7 191 aa13.73□□□□□ -0.21
ERBB2-206ENST00000578373 NOP2P46087 812 aaKnown RBP13.73□□□□□ -0.21
ERBB2-206ENST00000578373 EVCP57679 992 aa13.73□□□□□ -0.21
ERBB2-206ENST00000578373 DNAJC21Q5F1R6 531 aaKnown RBP13.73□□□□□ -0.21
ERBB2-206ENST00000578373 UIMC1Q96RL1 719 aa13.73□□□□□ -0.21
ERBB2-206ENST00000578373 XPO4Q9C0E2 1151 aaKnown RBP13.73□□□□□ -0.21
ERBB2-206ENST00000578373 VPS16Q9H269 839 aa13.73□□□□□ -0.21
ERBB2-206ENST00000578373 KDM5AP29375 1690 aaKnown RBP13.73□□□□□ -0.21
ERBB2-206ENST00000578373 TMCO5BA8MYB1 307 aa13.73□□□□□ -0.21
ERBB2-206ENST00000578373 CTDSPL2Q05D32 466 aa13.73□□□□□ -0.21
ERBB2-206ENST00000578373 TTLL7Q6ZT98 887 aa13.73□□□□□ -0.21
ERBB2-206ENST00000578373 CADPS2Q86UW7 1296 aa13.73□□□□□ -0.21
ERBB2-206ENST00000578373 CRACR2BQ8N4Y2 399 aaPredicted RBP13.73□□□□□ -0.21
ERBB2-206ENST00000578373 ZSWIM6Q9HCJ5 1215 aa13.73□□□□□ -0.21
ERBB2-206ENST00000578373 PRR36Q9H6K5 1346 aa13.73□□□□□ -0.21
ERBB2-206ENST00000578373 ZNF500O60304 480 aaPredicted RBP13.73□□□□□ -0.21
ERBB2-206ENST00000578373 PRPF4BQ13523 1007 aaKnown RBP13.73□□□□□ -0.21
ERBB2-206ENST00000578373 ZNF827Q17R98 1081 aa13.73□□□□□ -0.21
ERBB2-206ENST00000578373 SLFNL1Q499Z3 407 aa13.73□□□□□ -0.21
ERBB2-206ENST00000578373 KANK3Q6NY19 840 aa13.73□□□□□ -0.21
ERBB2-206ENST00000578373 CTR9Q6PD62 1173 aa13.73□□□□□ -0.21
ERBB2-206ENST00000578373 MMRN2Q9H8L6 949 aa13.73□□□□□ -0.21
ERBB2-206ENST00000578373 KCNH3Q9ULD8 1083 aa13.73□□□□□ -0.21
ERBB2-206ENST00000578373 CCDC175P0C221 793 aa13.72□□□□□ -0.21
ERBB2-206ENST00000578373 ITGA6P23229 1130 aa13.72□□□□□ -0.21
ERBB2-206ENST00000578373 PDE4BQ07343 736 aa13.72□□□□□ -0.21
ERBB2-206ENST00000578373 IQCEQ6IPM2 695 aa13.72□□□□□ -0.21
ERBB2-206ENST00000578373 DIS3L2Q8IYB7 885 aaKnown RBP13.72□□□□□ -0.21
ERBB2-206ENST00000578373 YEATS2Q9ULM3 1422 aa13.72□□□□□ -0.21
ERBB2-206ENST00000578373 KDM5DQ9BY66 1539 aa13.72□□□□□ -0.21
ERBB2-206ENST00000578373 USO1O60763 962 aaKnown RBP13.72□□□□□ -0.21
ERBB2-206ENST00000578373 ATP6V1AP38606 617 aa13.72□□□□□ -0.21
ERBB2-206ENST00000578373 SSR1P43307 286 aaKnown RBP13.72□□□□□ -0.21
ERBB2-206ENST00000578373 LRRC24Q50LG9 513 aa13.72□□□□□ -0.21
ERBB2-206ENST00000578373 KRI1Q8N9T8 703 aaKnown RBP13.72□□□□□ -0.21
ERBB2-206ENST00000578373 PLCD4Q9BRC7 762 aa13.72□□□□□ -0.21
ERBB2-206ENST00000578373 NEFHP12036 1026 aa13.72□□□□□ -0.21
ERBB2-206ENST00000578373 BRAPQ7Z569 592 aa13.72□□□□□ -0.21
ERBB2-206ENST00000578373 BAG1Q99933 345 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 203.1 ms