RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 GTF2IP78347 998 aa14.27□□□□□ -0.12
SMARCE1-214ENST00000578112 TNFAIP1Q13829 316 aa14.27□□□□□ -0.12
SMARCE1-214ENST00000578112 FBXW7Q969H0 707 aa14.27□□□□□ -0.12
SMARCE1-214ENST00000578112 VAMP4O75379 141 aa14.27□□□□□ -0.13
SMARCE1-214ENST00000578112 FOXO4P98177 505 aa14.27□□□□□ -0.13
SMARCE1-214ENST00000578112 PTPN12Q05209 780 aaKnown RBP14.27□□□□□ -0.13
SMARCE1-214ENST00000578112 TXNRD3Q86VQ6 643 aa14.27□□□□□ -0.13
SMARCE1-214ENST00000578112 GCC1Q96CN9 775 aa14.27□□□□□ -0.13
SMARCE1-214ENST00000578112 TESPA1A2RU30 521 aaPredicted RBP14.26□□□□□ -0.13
SMARCE1-214ENST00000578112 SASH1O94885 1247 aa14.26□□□□□ -0.13
SMARCE1-214ENST00000578112 IREB2P48200 963 aaKnown RBP14.26□□□□□ -0.13
SMARCE1-214ENST00000578112 SPDYE2BA6NHP3 402 aa14.26□□□□□ -0.13
SMARCE1-214ENST00000578112 SPDYE6P0CI01 402 aa14.26□□□□□ -0.13
SMARCE1-214ENST00000578112 UBE4AQ14139 1066 aa14.26□□□□□ -0.13
SMARCE1-214ENST00000578112 BEND3Q5T5X7 828 aa14.26□□□□□ -0.13
SMARCE1-214ENST00000578112 KIAA0825Q8IV33 1275 aa14.26□□□□□ -0.13
SMARCE1-214ENST00000578112 SLC10A4Q96EP9 437 aa14.26□□□□□ -0.13
SMARCE1-214ENST00000578112 ERO1AQ96HE7 468 aa14.26□□□□□ -0.13
SMARCE1-214ENST00000578112 WNK4Q96J92 1243 aa14.26□□□□□ -0.13
SMARCE1-214ENST00000578112 DEFB129Q9H1M3 183 aa14.26□□□□□ -0.13
SMARCE1-214ENST00000578112 SERPINA10Q9UK55 444 aa14.25□□□□□ -0.13
SMARCE1-214ENST00000578112 ANGEL1Q9UNK9 670 aaKnown RBP14.25□□□□□ -0.13
SMARCE1-214ENST00000578112 SSC5DA1L4H1 1573 aa14.25□□□□□ -0.13
SMARCE1-214ENST00000578112 TBC1D8O95759 1140 aa14.25□□□□□ -0.13
SMARCE1-214ENST00000578112 HDLBPQ00341 1268 aaKnown RBP14.25□□□□□ -0.13
SMARCE1-214ENST00000578112 ARHGEF6Q15052 776 aa14.25□□□□□ -0.13
SMARCE1-214ENST00000578112 MOB2Q70IA6 237 aa14.25□□□□□ -0.13
SMARCE1-214ENST00000578112 IFNL1Q8IU54 200 aa14.25□□□□□ -0.13
SMARCE1-214ENST00000578112 SOX10P56693 466 aa14.24□□□□□ -0.13
SMARCE1-214ENST00000578112 CCDC57Q2TAC2 916 aa14.24□□□□□ -0.13
SMARCE1-214ENST00000578112 ANKRD13AQ8IZ07 590 aa14.24□□□□□ -0.13
SMARCE1-214ENST00000578112 MXD3Q9BW11 206 aa14.24□□□□□ -0.13
SMARCE1-214ENST00000578112 GRM8O00222 908 aa14.24□□□□□ -0.13
SMARCE1-214ENST00000578112 CFAP100Q494V2 611 aa14.24□□□□□ -0.13
SMARCE1-214ENST00000578112 ZCCHC17Q9NP64 241 aaKnown RBP14.24□□□□□ -0.13
SMARCE1-214ENST00000578112 UTYO14607 1347 aa14.23□□□□□ -0.13
SMARCE1-214ENST00000578112 KIF16BQ96L93 1317 aa14.23□□□□□ -0.13
SMARCE1-214ENST00000578112 CERS5Q8N5B7 392 aa14.23□□□□□ -0.13
SMARCE1-214ENST00000578112 TDRD7Q8NHU6 1098 aaKnown RBP14.23□□□□□ -0.13
SMARCE1-214ENST00000578112 HOOK2Q96ED9 719 aa14.23□□□□□ -0.13
SMARCE1-214ENST00000578112 MRIQ9BWK5 157 aa14.23□□□□□ -0.13
SMARCE1-214ENST00000578112 MROH5Q6ZUA9 1318 aa14.23□□□□□ -0.13
SMARCE1-214ENST00000578112 KLRK1P26718 216 aa14.23□□□□□ -0.13
SMARCE1-214ENST00000578112 TNNI2P48788 182 aa14.23□□□□□ -0.13
SMARCE1-214ENST00000578112 WTIPA6NIX2 430 aaPredicted RBP14.22□□□□□ -0.13
SMARCE1-214ENST00000578112 SPDYE2Q495Y8 402 aa14.22□□□□□ -0.13
SMARCE1-214ENST00000578112 TAF7LQ5H9L4 462 aa14.22□□□□□ -0.13
SMARCE1-214ENST00000578112 SUGT1Q9Y2Z0 365 aa14.22□□□□□ -0.13
SMARCE1-214ENST00000578112 ZBTB22O15209 634 aa14.22□□□□□ -0.13
SMARCE1-214ENST00000578112 TBC1D22AQ8WUA7 517 aa14.22□□□□□ -0.13
SMARCE1-214ENST00000578112 OTOFQ9HC10 1997 aa14.21□□□□□ -0.13
SMARCE1-214ENST00000578112 PRAMEF18Q5VWM3 479 aa14.21□□□□□ -0.13
SMARCE1-214ENST00000578112 LDHAL6AQ6ZMR3 332 aa14.21□□□□□ -0.13
SMARCE1-214ENST00000578112 RPAP1Q9BWH6 1393 aaPredicted RBP14.21□□□□□ -0.14
SMARCE1-214ENST00000578112 LMBR1LQ6UX01 489 aa14.2□□□□□ -0.14
SMARCE1-214ENST00000578112 CNNM1Q9NRU3 951 aa14.2□□□□□ -0.14
SMARCE1-214ENST00000578112 MAST3O60307 1309 aa14.2□□□□□ -0.14
SMARCE1-214ENST00000578112 EXOSC9Q06265 439 aaKnown RBP14.2□□□□□ -0.14
SMARCE1-214ENST00000578112 FKBP1CQ5VVH2 108 aa14.2□□□□□ -0.14
SMARCE1-214ENST00000578112 ARMC5Q96C12 935 aa14.2□□□□□ -0.14
SMARCE1-214ENST00000578112 USP2O75604 605 aaPredicted RBP14.19□□□□□ -0.14
SMARCE1-214ENST00000578112 HIBADHP31937 336 aaKnown RBP14.19□□□□□ -0.14
SMARCE1-214ENST00000578112 SRCIN1Q9C0H9 1055 aa14.19□□□□□ -0.14
SMARCE1-214ENST00000578112 RABL6Q3YEC7 729 aaPredicted RBP14.19□□□□□ -0.14
SMARCE1-214ENST00000578112 PRMT6Q96LA8 375 aaPredicted RBP14.19□□□□□ -0.14
SMARCE1-214ENST00000578112 C9orf78Q9NZ63 289 aaPredicted RBP14.19□□□□□ -0.14
SMARCE1-214ENST00000578112 TAF5LO75529 589 aa14.18□□□□□ -0.14
SMARCE1-214ENST00000578112 WDHD1O75717 1129 aaPredicted RBP14.18□□□□□ -0.14
SMARCE1-214ENST00000578112 OTOP1Q7RTM1 612 aa14.18□□□□□ -0.14
SMARCE1-214ENST00000578112 ZNF70Q9UC06 446 aaPredicted RBP14.18□□□□□ -0.14
SMARCE1-214ENST00000578112 PTPN22Q9Y2R2 807 aa14.18□□□□□ -0.14
SMARCE1-214ENST00000578112 GNRH1P01148 92 aa14.18□□□□□ -0.14
SMARCE1-214ENST00000578112 GTF2A2P52657 109 aa14.18□□□□□ -0.14
SMARCE1-214ENST00000578112 RASA3Q14644 834 aa14.18□□□□□ -0.14
SMARCE1-214ENST00000578112 MRS2Q9HD23 443 aa14.18□□□□□ -0.14
SMARCE1-214ENST00000578112 CHMP3Q9Y3E7 222 aa14.18□□□□□ -0.14
SMARCE1-214ENST00000578112 PTPRCP08575 1304 aa14.18□□□□□ -0.14
SMARCE1-214ENST00000578112 ANP32CO43423 234 aa14.17□□□□□ -0.14
SMARCE1-214ENST00000578112 PRMT2P55345 433 aa14.17□□□□□ -0.14
SMARCE1-214ENST00000578112 FBXO33Q7Z6M2 555 aa14.17□□□□□ -0.14
SMARCE1-214ENST00000578112 IGF2BP3O00425 579 aaKnown RBP eCLIP14.17□□□□□ -0.14
SMARCE1-214ENST00000578112 CAPN2P17655 700 aa14.17□□□□□ -0.14
SMARCE1-214ENST00000578112 MFSD14BQ5SR56 506 aa14.17□□□□□ -0.14
SMARCE1-214ENST00000578112 FAM83AQ86UY5 434 aa14.17□□□□□ -0.14
SMARCE1-214ENST00000578112 VEZTQ9HBM0 779 aa14.17□□□□□ -0.14
SMARCE1-214ENST00000578112 TRIM17Q9Y577 477 aa14.17□□□□□ -0.14
SMARCE1-214ENST00000578112 MAP3K9P80192 1104 aa14.16□□□□□ -0.14
SMARCE1-214ENST00000578112 NBPF12Q5TAG4 269 aaPredicted RBP14.16□□□□□ -0.14
SMARCE1-214ENST00000578112 FAM84BQ96KN1 310 aaPredicted RBP14.16□□□□□ -0.14
SMARCE1-214ENST00000578112 TTF2Q9UNY4 1162 aaKnown RBP14.16□□□□□ -0.14
SMARCE1-214ENST00000578112 RIPOR2Q9Y4F9 1068 aa14.16□□□□□ -0.14
SMARCE1-214ENST00000578112 SP3Q02447 781 aa14.16□□□□□ -0.14
SMARCE1-214ENST00000578112 CAVIN4Q5BKX8 364 aa14.16□□□□□ -0.14
SMARCE1-214ENST00000578112 DZIP1LQ8IYY4 767 aaKnown RBP14.16□□□□□ -0.14
SMARCE1-214ENST00000578112 ZFYVE28Q9HCC9 887 aa14.16□□□□□ -0.14
SMARCE1-214ENST00000578112 FBXO3Q9UK99 471 aa14.16□□□□□ -0.14
SMARCE1-214ENST00000578112 SCAF8Q9UPN6 1271 aaKnown RBP14.16□□□□□ -0.14
SMARCE1-214ENST00000578112 ZEB1P37275 1124 aaPredicted RBP14.15□□□□□ -0.14
SMARCE1-214ENST00000578112 CRKP46108 304 aa14.15□□□□□ -0.14
SMARCE1-214ENST00000578112 RBM5P52756 815 aaKnown RBP eCLIP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms