RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 VEGFBP49765 207 aa27.52■■■□□ 2
SMARCD2-206ENST00000577990 ZNF280AP59817 542 aaPredicted RBP27.52■■■□□ 2
SMARCD2-206ENST00000577990 TDRD7Q8NHU6 1098 aaKnown RBP27.52■■■□□ 2
SMARCD2-206ENST00000577990 SSH3Q8TE77 659 aa27.52■■■□□ 2
SMARCD2-206ENST00000577990 ABT1Q9ULW3 272 aaKnown RBP27.52■■■□□ 2
SMARCD2-206ENST00000577990 ATP2B3Q16720 1220 aa27.51■■□□□ 1.99
SMARCD2-206ENST00000577990 TBC1D10BQ4KMP7 808 aaPredicted RBP27.51■■□□□ 1.99
SMARCD2-206ENST00000577990 SASH1O94885 1247 aa27.5■■□□□ 1.99
SMARCD2-206ENST00000577990 COL13A1Q5TAT6 717 aaPredicted RBP27.5■■□□□ 1.99
SMARCD2-206ENST00000577990 CEP85Q6P2H3 762 aa27.5■■□□□ 1.99
SMARCD2-206ENST00000577990 GLIS2Q9BZE0 524 aaPredicted RBP27.5■■□□□ 1.99
SMARCD2-206ENST00000577990 CHMP4BQ9H444 224 aaKnown RBP27.5■■□□□ 1.99
SMARCD2-206ENST00000577990 EGFRP00533 1210 aa27.49■■□□□ 1.99
SMARCD2-206ENST00000577990 G3BP1Q13283 466 aaKnown RBP eCLIP27.49■■□□□ 1.99
SMARCD2-206ENST00000577990 KIF4BQ2VIQ3 1234 aa27.49■■□□□ 1.99
SMARCD2-206ENST00000577990 RBM26Q5T8P6 1007 aaKnown RBP27.49■■□□□ 1.99
SMARCD2-206ENST00000577990 ZC3H15Q8WU90 426 aaKnown RBP27.49■■□□□ 1.99
SMARCD2-206ENST00000577990 FAM205AQ6ZU69 1335 aa27.48■■□□□ 1.99
SMARCD2-206ENST00000577990 RASSF10A6NK89 507 aa27.48■■□□□ 1.99
SMARCD2-206ENST00000577990 BCAMP50895 628 aa27.48■■□□□ 1.99
SMARCD2-206ENST00000577990 ZBTB40Q9NUA8 1239 aa27.48■■□□□ 1.99
SMARCD2-206ENST00000577990 PGAP2Q9UHJ9 254 aa27.48■■□□□ 1.99
SMARCD2-206ENST00000577990 JAG2Q9Y219 1238 aa27.48■■□□□ 1.99
SMARCD2-206ENST00000577990 FKBP1AP62942 108 aaKnown RBP27.47■■□□□ 1.99
SMARCD2-206ENST00000577990 TFCP2Q12800 502 aa27.47■■□□□ 1.99
SMARCD2-206ENST00000577990 DEFB115Q30KQ5 88 aa27.47■■□□□ 1.99
SMARCD2-206ENST00000577990 CST9Q5W186 159 aa27.47■■□□□ 1.99
SMARCD2-206ENST00000577990 OGFOD1Q8N543 542 aa27.47■■□□□ 1.99
SMARCD2-206ENST00000577990 CERS5Q8N5B7 392 aa27.47■■□□□ 1.99
SMARCD2-206ENST00000577990 MMP14P50281 582 aa27.46■■□□□ 1.99
SMARCD2-206ENST00000577990 KIAA0825Q8IV33 1275 aa27.46■■□□□ 1.99
SMARCD2-206ENST00000577990 MYOZ2Q9NPC6 264 aa27.46■■□□□ 1.99
SMARCD2-206ENST00000577990 IQSEC3Q9UPP2 1182 aaPredicted RBP27.46■■□□□ 1.99
SMARCD2-206ENST00000577990 ARAP2Q8WZ64 1704 aa27.46■■□□□ 1.99
SMARCD2-206ENST00000577990 FRAT2O75474 233 aaPredicted RBP27.45■■□□□ 1.98
SMARCD2-206ENST00000577990 RRP1P56182 461 aaKnown RBP27.45■■□□□ 1.98
SMARCD2-206ENST00000577990 HDAC9Q9UKV0 1011 aa27.45■■□□□ 1.98
SMARCD2-206ENST00000577990 AKAP2Q9Y2D5 859 aa27.45■■□□□ 1.98
SMARCD2-206ENST00000577990 SURF6O75683 361 aaKnown RBP27.43■■□□□ 1.98
SMARCD2-206ENST00000577990 OS9Q13438 667 aaPredicted RBP27.43■■□□□ 1.98
SMARCD2-206ENST00000577990 DLK2Q6UY11 383 aa27.43■■□□□ 1.98
SMARCD2-206ENST00000577990 PAXIP1Q6ZW49 1069 aaPredicted RBP27.43■■□□□ 1.98
SMARCD2-206ENST00000577990 ZNF408Q9H9D4 720 aa27.43■■□□□ 1.98
SMARCD2-206ENST00000577990 NOP58Q9Y2X3 529 aaKnown RBP27.43■■□□□ 1.98
SMARCD2-206ENST00000577990 A0A1B0GUL7 405 aa27.42■■□□□ 1.98
SMARCD2-206ENST00000577990 CELF2O95319 508 aaKnown RBP27.42■■□□□ 1.98
SMARCD2-206ENST00000577990 CHAF1AQ13111 956 aaPredicted RBP27.42■■□□□ 1.98
SMARCD2-206ENST00000577990 MFSD14BQ5SR56 506 aa27.42■■□□□ 1.98
SMARCD2-206ENST00000577990 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.42■■□□□ 1.98
SMARCD2-206ENST00000577990 WDR33Q9C0J8 1336 aaKnown RBP27.41■■□□□ 1.98
SMARCD2-206ENST00000577990 MYH13Q9UKX3 1938 aa27.41■■□□□ 1.98
SMARCD2-206ENST00000577990 ADORA1P30542 326 aa27.41■■□□□ 1.98
SMARCD2-206ENST00000577990 TIMM10P62072 90 aa27.41■■□□□ 1.98
SMARCD2-206ENST00000577990 GRM1Q13255 1194 aa27.41■■□□□ 1.98
SMARCD2-206ENST00000577990 RPAP2Q8IXW5 612 aaPredicted RBP27.41■■□□□ 1.98
SMARCD2-206ENST00000577990 F8W031 263 aaPredicted RBP27.4■■□□□ 1.98
SMARCD2-206ENST00000577990 FOXN1O15353 648 aa27.4■■□□□ 1.98
SMARCD2-206ENST00000577990 SCARF1Q14162 830 aa27.4■■□□□ 1.98
SMARCD2-206ENST00000577990 USP48Q86UV5 1035 aa27.4■■□□□ 1.98
SMARCD2-206ENST00000577990 TBC1D22AQ8WUA7 517 aa27.4■■□□□ 1.98
SMARCD2-206ENST00000577990 GNL3LQ9NVN8 582 aaKnown RBP27.4■■□□□ 1.98
SMARCD2-206ENST00000577990 TLL2Q9Y6L7 1015 aa27.4■■□□□ 1.98
SMARCD2-206ENST00000577990 THSD7BQ9C0I4 1608 aa27.4■■□□□ 1.98
SMARCD2-206ENST00000577990 CYP4F22Q6NT55 531 aa27.39■■□□□ 1.98
SMARCD2-206ENST00000577990 CDC37L1Q7L3B6 337 aa27.39■■□□□ 1.98
SMARCD2-206ENST00000577990 DCPSQ96C86 337 aaKnown RBP27.39■■□□□ 1.98
SMARCD2-206ENST00000577990 GGA3Q9NZ52 723 aa27.39■■□□□ 1.98
SMARCD2-206ENST00000577990 ASTN2O75129 1339 aaPredicted RBP27.39■■□□□ 1.97
SMARCD2-206ENST00000577990 HMMRO75330 724 aa27.38■■□□□ 1.97
SMARCD2-206ENST00000577990 PHKA1P46020 1223 aa27.38■■□□□ 1.97
SMARCD2-206ENST00000577990 XAGE2Q96GT9 111 aa27.38■■□□□ 1.97
SMARCD2-206ENST00000577990 CAPNS2Q96L46 248 aa27.38■■□□□ 1.97
SMARCD2-206ENST00000577990 COL1A1P02452 1464 aaPredicted RBP27.38■■□□□ 1.97
SMARCD2-206ENST00000577990 CCDC102BQ68D86 513 aa27.37■■□□□ 1.97
SMARCD2-206ENST00000577990 NEUROD6Q96NK8 337 aa27.37■■□□□ 1.97
SMARCD2-206ENST00000577990 GPR108Q9NPR9 543 aa27.37■■□□□ 1.97
SMARCD2-206ENST00000577990 WNT10BO00744 389 aa27.36■■□□□ 1.97
SMARCD2-206ENST00000577990 NBPF9Q3BBW0 867 aa27.36■■□□□ 1.97
SMARCD2-206ENST00000577990 ANGEL2Q5VTE6 544 aaKnown RBP27.36■■□□□ 1.97
SMARCD2-206ENST00000577990 KRT26Q7Z3Y9 468 aa27.36■■□□□ 1.97
SMARCD2-206ENST00000577990 SIRT2Q8IXJ6 389 aa27.36■■□□□ 1.97
SMARCD2-206ENST00000577990 ADM5C9JUS6 153 aa27.35■■□□□ 1.97
SMARCD2-206ENST00000577990 SEMA3EO15041 775 aa27.35■■□□□ 1.97
SMARCD2-206ENST00000577990 ZBTB22O15209 634 aa27.35■■□□□ 1.97
SMARCD2-206ENST00000577990 DLGAP5Q15398 846 aa27.35■■□□□ 1.97
SMARCD2-206ENST00000577990 AIDAQ96BJ3 306 aa27.35■■□□□ 1.97
SMARCD2-206ENST00000577990 ZBED3Q96IU2 234 aaPredicted RBP27.35■■□□□ 1.97
SMARCD2-206ENST00000577990 TTF2Q9UNY4 1162 aaKnown RBP27.35■■□□□ 1.97
SMARCD2-206ENST00000577990 EXOC6BQ9Y2D4 811 aa27.35■■□□□ 1.97
SMARCD2-206ENST00000577990 PITPNM2Q9BZ72 1349 aa27.35■■□□□ 1.97
SMARCD2-206ENST00000577990 TNNI3KQ59H18 835 aa27.34■■□□□ 1.97
SMARCD2-206ENST00000577990 SAPCD2Q86UD0 394 aa27.34■■□□□ 1.97
SMARCD2-206ENST00000577990 SULF1Q8IWU6 871 aa27.34■■□□□ 1.97
SMARCD2-206ENST00000577990 TNS4Q8IZW8 715 aa27.34■■□□□ 1.97
SMARCD2-206ENST00000577990 MTMR14Q8NCE2 650 aa27.34■■□□□ 1.97
SMARCD2-206ENST00000577990 WDR66Q8TBY9 1149 aa27.34■■□□□ 1.97
SMARCD2-206ENST00000577990 WBP1LQ9NX94 342 aa27.34■■□□□ 1.97
SMARCD2-206ENST00000577990 DENND2AQ9ULE3 1009 aa27.34■■□□□ 1.97
SMARCD2-206ENST00000577990 FPGT-TNNI3KV9GXZ4 949 aa27.34■■□□□ 1.97
SMARCD2-206ENST00000577990 CFAP100Q494V2 611 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms