RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 ZNF296Q8WUU4 475 aaPredicted RBP20.22■□□□□ 0.83
VAPA-204ENST00000577901 ZBED3Q96IU2 234 aaPredicted RBP20.22■□□□□ 0.83
VAPA-204ENST00000577901 PTPRCP08575 1304 aa20.22■□□□□ 0.83
VAPA-204ENST00000577901 PTPN12Q05209 780 aaKnown RBP20.21■□□□□ 0.83
VAPA-204ENST00000577901 BEND3Q5T5X7 828 aa20.21■□□□□ 0.83
VAPA-204ENST00000577901 SMC4Q9NTJ3 1288 aa20.21■□□□□ 0.83
VAPA-204ENST00000577901 SNAP23O00161 211 aa20.2■□□□□ 0.82
VAPA-204ENST00000577901 TAF5LO75529 589 aa20.2■□□□□ 0.82
VAPA-204ENST00000577901 SREBF2Q12772 1141 aa20.2■□□□□ 0.82
VAPA-204ENST00000577901 DLGAP5Q15398 846 aa20.2■□□□□ 0.82
VAPA-204ENST00000577901 PKN2Q16513 984 aaKnown RBP20.2■□□□□ 0.82
VAPA-204ENST00000577901 SLC4A10Q6U841 1118 aa20.2■□□□□ 0.82
VAPA-204ENST00000577901 HELBQ8NG08 1087 aaPredicted RBP20.2■□□□□ 0.82
VAPA-204ENST00000577901 HPS5Q9UPZ3 1129 aa20.2■□□□□ 0.82
VAPA-204ENST00000577901 IRS2Q9Y4H2 1338 aa20.2■□□□□ 0.82
VAPA-204ENST00000577901 FOXO4P98177 505 aa20.19■□□□□ 0.82
VAPA-204ENST00000577901 IFIT5Q13325 482 aaKnown RBP20.19■□□□□ 0.82
VAPA-204ENST00000577901 C15orf52Q6ZUT6 534 aaKnown RBP20.19■□□□□ 0.82
VAPA-204ENST00000577901 DEFB129Q9H1M3 183 aa20.19■□□□□ 0.82
VAPA-204ENST00000577901 RNF39Q9H2S5 420 aa20.19■□□□□ 0.82
VAPA-204ENST00000577901 COL1A1P02452 1464 aaPredicted RBP20.18■□□□□ 0.82
VAPA-204ENST00000577901 GPR25O00155 361 aa20.18■□□□□ 0.82
VAPA-204ENST00000577901 NOM1Q5C9Z4 860 aaKnown RBP20.18■□□□□ 0.82
VAPA-204ENST00000577901 LDLRAD1Q5T700 205 aa20.18■□□□□ 0.82
VAPA-204ENST00000577901 CERS5Q8N5B7 392 aa20.18■□□□□ 0.82
VAPA-204ENST00000577901 SRCIN1Q9C0H9 1055 aa20.18■□□□□ 0.82
VAPA-204ENST00000577901 ANGEL1Q9UNK9 670 aaKnown RBP20.18■□□□□ 0.82
VAPA-204ENST00000577901 CHMP3Q9Y3E7 222 aa20.18■□□□□ 0.82
VAPA-204ENST00000577901 ALDH1L1O75891 902 aa20.17■□□□□ 0.82
VAPA-204ENST00000577901 MTMR14Q8NCE2 650 aa20.17■□□□□ 0.82
VAPA-204ENST00000577901 ZBED9Q6R2W3 1325 aa20.17■□□□□ 0.82
VAPA-204ENST00000577901 IL1R1P14778 569 aa20.16■□□□□ 0.82
VAPA-204ENST00000577901 SPRYD7Q5W111 196 aa20.16■□□□□ 0.82
VAPA-204ENST00000577901 ZNF804AQ7Z570 1209 aa20.16■□□□□ 0.82
VAPA-204ENST00000577901 C9orf78Q9NZ63 289 aaPredicted RBP20.16■□□□□ 0.82
VAPA-204ENST00000577901 FZD1Q9UP38 647 aa20.16■□□□□ 0.82
VAPA-204ENST00000577901 F8W031 263 aaPredicted RBP20.15■□□□□ 0.82
VAPA-204ENST00000577901 LMBR1LQ6UX01 489 aa20.15■□□□□ 0.82
VAPA-204ENST00000577901 CFHR5Q9BXR6 569 aa20.15■□□□□ 0.82
VAPA-204ENST00000577901 PCDHAC2Q9Y5I4 1007 aa20.15■□□□□ 0.82
VAPA-204ENST00000577901 PPP2R3BQ9Y5P8 575 aa20.15■□□□□ 0.82
VAPA-204ENST00000577901 GRM8O00222 908 aa20.14■□□□□ 0.81
VAPA-204ENST00000577901 MYO1BO43795 1136 aa20.14■□□□□ 0.81
VAPA-204ENST00000577901 RARSP54136 660 aaKnown RBP20.14■□□□□ 0.81
VAPA-204ENST00000577901 FKBP1AP62942 108 aaKnown RBP20.14■□□□□ 0.81
VAPA-204ENST00000577901 CCDC57Q2TAC2 916 aa20.14■□□□□ 0.81
VAPA-204ENST00000577901 CFAP100Q494V2 611 aa20.14■□□□□ 0.81
VAPA-204ENST00000577901 EPHA10Q5JZY3 1008 aa20.14■□□□□ 0.81
VAPA-204ENST00000577901 SLC10A4Q96EP9 437 aa20.14■□□□□ 0.81
VAPA-204ENST00000577901 R3HDMLQ9H3Y0 253 aa20.14■□□□□ 0.81
VAPA-204ENST00000577901 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.14■□□□□ 0.81
VAPA-204ENST00000577901 CLRN2A0PK11 232 aa20.13■□□□□ 0.81
VAPA-204ENST00000577901 SPDYE2BA6NHP3 402 aa20.13■□□□□ 0.81
VAPA-204ENST00000577901 PPP1R12BO60237 982 aaPredicted RBP20.13■□□□□ 0.81
VAPA-204ENST00000577901 PLIN1O60240 522 aa20.13■□□□□ 0.81
VAPA-204ENST00000577901 FKTNO75072 461 aa20.13■□□□□ 0.81
VAPA-204ENST00000577901 SPDYE6P0CI01 402 aa20.13■□□□□ 0.81
VAPA-204ENST00000577901 MAP3K11Q16584 847 aa20.13■□□□□ 0.81
VAPA-204ENST00000577901 TAF7LQ5H9L4 462 aa20.13■□□□□ 0.81
VAPA-204ENST00000577901 LDHAL6AQ6ZMR3 332 aa20.13■□□□□ 0.81
VAPA-204ENST00000577901 ZNF594Q96JF6 807 aaPredicted RBP20.13■□□□□ 0.81
VAPA-204ENST00000577901 PRMT6Q96LA8 375 aaPredicted RBP20.13■□□□□ 0.81
VAPA-204ENST00000577901 NOB1Q9ULX3 412 aaKnown RBP20.13■□□□□ 0.81
VAPA-204ENST00000577901 JAG2Q9Y219 1238 aa20.13■□□□□ 0.81
VAPA-204ENST00000577901 A0A1B0GUL6 1792 aa20.13■□□□□ 0.81
VAPA-204ENST00000577901 SSC5DA1L4H1 1573 aa20.12■□□□□ 0.81
VAPA-204ENST00000577901 MANSC4A6NHS7 340 aaPredicted RBP20.12■□□□□ 0.81
VAPA-204ENST00000577901 ALDH1A1P00352 501 aa20.12■□□□□ 0.81
VAPA-204ENST00000577901 FBXO46Q6PJ61 603 aaPredicted RBP20.12■□□□□ 0.81
VAPA-204ENST00000577901 CNNM1Q9NRU3 951 aa20.12■□□□□ 0.81
VAPA-204ENST00000577901 INHBEP58166 350 aa20.11■□□□□ 0.81
VAPA-204ENST00000577901 SUPT20HL1Q3ZLR7 823 aa20.11■□□□□ 0.81
VAPA-204ENST00000577901 CLMNQ96JQ2 1002 aa20.11■□□□□ 0.81
VAPA-204ENST00000577901 API5Q9BZZ5 524 aaKnown RBP20.11■□□□□ 0.81
VAPA-204ENST00000577901 VEZTQ9HBM0 779 aa20.11■□□□□ 0.81
VAPA-204ENST00000577901 ZBTB48P10074 688 aaPredicted RBP20.1■□□□□ 0.81
VAPA-204ENST00000577901 RBM5P52756 815 aaKnown RBP eCLIP20.1■□□□□ 0.81
VAPA-204ENST00000577901 IFNL1Q8IU54 200 aa20.1■□□□□ 0.81
VAPA-204ENST00000577901 WNK4Q96J92 1243 aa20.1■□□□□ 0.81
VAPA-204ENST00000577901 AOX1Q06278 1338 aa20.09■□□□□ 0.81
VAPA-204ENST00000577901 KIF16BQ96L93 1317 aa20.09■□□□□ 0.81
VAPA-204ENST00000577901 UNCXA6NJT0 531 aa20.09■□□□□ 0.81
VAPA-204ENST00000577901 NBPF12Q5TAG4 269 aaPredicted RBP20.09■□□□□ 0.81
VAPA-204ENST00000577901 ECM29Q5VYK3 1845 aa20.09■□□□□ 0.81
VAPA-204ENST00000577901 FAM205AQ6ZU69 1335 aa20.08■□□□□ 0.81
VAPA-204ENST00000577901 IPO8O15397 1037 aaKnown RBP20.08■□□□□ 0.81
VAPA-204ENST00000577901 RASA3Q14644 834 aa20.08■□□□□ 0.81
VAPA-204ENST00000577901 ARHGAP45Q92619 1136 aa20.08■□□□□ 0.81
VAPA-204ENST00000577901 IGF2BP3O00425 579 aaKnown RBP eCLIP20.07■□□□□ 0.8
VAPA-204ENST00000577901 HOXD11P31277 338 aaPredicted RBP20.07■□□□□ 0.8
VAPA-204ENST00000577901 IREB2P48200 963 aaKnown RBP20.07■□□□□ 0.8
VAPA-204ENST00000577901 UTYO14607 1347 aa20.06■□□□□ 0.8
VAPA-204ENST00000577901 USP2O75604 605 aaPredicted RBP20.06■□□□□ 0.8
VAPA-204ENST00000577901 NBPF7P0C2Y1 421 aaPredicted RBP20.06■□□□□ 0.8
VAPA-204ENST00000577901 HIBADHP31937 336 aaKnown RBP20.06■□□□□ 0.8
VAPA-204ENST00000577901 UBE4AQ14139 1066 aa20.06■□□□□ 0.8
VAPA-204ENST00000577901 MFSD14BQ5SR56 506 aa20.06■□□□□ 0.8
VAPA-204ENST00000577901 PRPF38BQ5VTL8 546 aaKnown RBP20.06■□□□□ 0.8
VAPA-204ENST00000577901 TDRD7Q8NHU6 1098 aaKnown RBP20.06■□□□□ 0.8
VAPA-204ENST00000577901 GYG1P46976 350 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms