RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 MKRN3Q13064 507 aaKnown RBP13.24□□□□□ -0.29
TVP23B-208ENST00000575261 PRKG1Q13976 671 aa13.24□□□□□ -0.29
TVP23B-208ENST00000575261 LMBR1LQ6UX01 489 aa13.24□□□□□ -0.29
TVP23B-208ENST00000575261 CERS5Q8N5B7 392 aa13.24□□□□□ -0.29
TVP23B-208ENST00000575261 HELBQ8NG08 1087 aaPredicted RBP13.24□□□□□ -0.29
TVP23B-208ENST00000575261 DEFB129Q9H1M3 183 aa13.24□□□□□ -0.29
TVP23B-208ENST00000575261 CNNM1Q9NRU3 951 aa13.24□□□□□ -0.29
TVP23B-208ENST00000575261 PPP2R3BQ9Y5P8 575 aa13.24□□□□□ -0.29
TVP23B-208ENST00000575261 LAMB1P07942 1786 aa13.23□□□□□ -0.29
TVP23B-208ENST00000575261 TBC1D8O95759 1140 aa13.23□□□□□ -0.29
TVP23B-208ENST00000575261 SOX10P56693 466 aa13.23□□□□□ -0.29
TVP23B-208ENST00000575261 PTPN12Q05209 780 aaKnown RBP13.23□□□□□ -0.29
TVP23B-208ENST00000575261 PKN2Q16513 984 aaKnown RBP13.23□□□□□ -0.29
TVP23B-208ENST00000575261 NOM1Q5C9Z4 860 aaKnown RBP13.23□□□□□ -0.29
TVP23B-208ENST00000575261 LDHAL6AQ6ZMR3 332 aa13.23□□□□□ -0.29
TVP23B-208ENST00000575261 ZNF296Q8WUU4 475 aaPredicted RBP13.23□□□□□ -0.29
TVP23B-208ENST00000575261 SPINK5Q9NQ38 1064 aaPredicted RBP13.23□□□□□ -0.29
TVP23B-208ENST00000575261 C9orf78Q9NZ63 289 aaPredicted RBP13.23□□□□□ -0.29
TVP23B-208ENST00000575261 ANGEL1Q9UNK9 670 aaKnown RBP13.23□□□□□ -0.29
TVP23B-208ENST00000575261 SSC5DA1L4H1 1573 aa13.23□□□□□ -0.29
TVP23B-208ENST00000575261 PDE4DIPQ5VU43 2346 aa13.23□□□□□ -0.29
TVP23B-208ENST00000575261 CENPFP49454 3210 aa13.22□□□□□ -0.29
TVP23B-208ENST00000575261 SPDYE2BA6NHP3 402 aa13.22□□□□□ -0.29
TVP23B-208ENST00000575261 F8W031 263 aaPredicted RBP13.22□□□□□ -0.29
TVP23B-208ENST00000575261 ALDH1L1O75891 902 aa13.22□□□□□ -0.29
TVP23B-208ENST00000575261 SPDYE6P0CI01 402 aa13.22□□□□□ -0.29
TVP23B-208ENST00000575261 CFAP100Q494V2 611 aa13.22□□□□□ -0.29
TVP23B-208ENST00000575261 EPHA10Q5JZY3 1008 aa13.22□□□□□ -0.29
TVP23B-208ENST00000575261 LDLRAD1Q5T700 205 aa13.22□□□□□ -0.29
TVP23B-208ENST00000575261 ZNF594Q96JF6 807 aaPredicted RBP13.22□□□□□ -0.29
TVP23B-208ENST00000575261 CLRN2A0PK11 232 aa13.21□□□□□ -0.29
TVP23B-208ENST00000575261 GPR25O00155 361 aa13.21□□□□□ -0.29
TVP23B-208ENST00000575261 PPP1R12BO60237 982 aaPredicted RBP13.21□□□□□ -0.29
TVP23B-208ENST00000575261 PLIN1O60240 522 aa13.21□□□□□ -0.29
TVP23B-208ENST00000575261 ZEB1P37275 1124 aaPredicted RBP13.21□□□□□ -0.29
TVP23B-208ENST00000575261 MAP3K11Q16584 847 aa13.21□□□□□ -0.29
TVP23B-208ENST00000575261 SPRYD7Q5W111 196 aa13.21□□□□□ -0.29
TVP23B-208ENST00000575261 SLC4A10Q6U841 1118 aa13.21□□□□□ -0.29
TVP23B-208ENST00000575261 CFHR5Q9BXR6 569 aa13.21□□□□□ -0.29
TVP23B-208ENST00000575261 SRCIN1Q9C0H9 1055 aa13.21□□□□□ -0.29
TVP23B-208ENST00000575261 VEZTQ9HBM0 779 aa13.21□□□□□ -0.29
TVP23B-208ENST00000575261 HPS5Q9UPZ3 1129 aa13.21□□□□□ -0.29
TVP23B-208ENST00000575261 JAG2Q9Y219 1238 aa13.21□□□□□ -0.29
TVP23B-208ENST00000575261 MANSC4A6NHS7 340 aaPredicted RBP13.2□□□□□ -0.3
TVP23B-208ENST00000575261 SLC34A2O95436 690 aa13.2□□□□□ -0.3
TVP23B-208ENST00000575261 ALDH1A1P00352 501 aa13.2□□□□□ -0.3
TVP23B-208ENST00000575261 ZBTB48P10074 688 aaPredicted RBP13.2□□□□□ -0.3
TVP23B-208ENST00000575261 RBM5P52756 815 aaKnown RBP eCLIP13.2□□□□□ -0.3
TVP23B-208ENST00000575261 UBE4AQ14139 1066 aa13.2□□□□□ -0.3
TVP23B-208ENST00000575261 SUPT20HL1Q3ZLR7 823 aa13.2□□□□□ -0.3
TVP23B-208ENST00000575261 FZD1Q9UP38 647 aa13.2□□□□□ -0.3
TVP23B-208ENST00000575261 PCDHAC2Q9Y5I4 1007 aa13.2□□□□□ -0.3
TVP23B-208ENST00000575261 FAM205AQ6ZU69 1335 aa13.19□□□□□ -0.3
TVP23B-208ENST00000575261 UNCXA6NJT0 531 aa13.19□□□□□ -0.3
TVP23B-208ENST00000575261 TNFAIP1Q13829 316 aa13.19□□□□□ -0.3
TVP23B-208ENST00000575261 MFSD14BQ5SR56 506 aa13.19□□□□□ -0.3
TVP23B-208ENST00000575261 FAM9BQ8IZU0 186 aa13.19□□□□□ -0.3
TVP23B-208ENST00000575261 SLC10A4Q96EP9 437 aa13.19□□□□□ -0.3
TVP23B-208ENST00000575261 SUCLG2Q96I99 432 aa13.19□□□□□ -0.3
TVP23B-208ENST00000575261 PRMT6Q96LA8 375 aaPredicted RBP13.19□□□□□ -0.3
TVP23B-208ENST00000575261 OTOFQ9HC10 1997 aa13.18□□□□□ -0.3
TVP23B-208ENST00000575261 ZNF316A6NFI3 1004 aaPredicted RBP13.18□□□□□ -0.3
TVP23B-208ENST00000575261 FKTNO75072 461 aa13.18□□□□□ -0.3
TVP23B-208ENST00000575261 HIBADHP31937 336 aaKnown RBP13.18□□□□□ -0.3
TVP23B-208ENST00000575261 INHBEP58166 350 aa13.18□□□□□ -0.3
TVP23B-208ENST00000575261 FBXO46Q6PJ61 603 aaPredicted RBP13.18□□□□□ -0.3
TVP23B-208ENST00000575261 WNK4Q96J92 1243 aa13.18□□□□□ -0.3
TVP23B-208ENST00000575261 SERPINA10Q9UK55 444 aa13.18□□□□□ -0.3
TVP23B-208ENST00000575261 BRCA2P51587 3418 aa13.18□□□□□ -0.3
TVP23B-208ENST00000575261 MKI67P46013 3256 aaKnown RBP13.17□□□□□ -0.3
TVP23B-208ENST00000575261 UTYO14607 1347 aa13.17□□□□□ -0.3
TVP23B-208ENST00000575261 AOX1Q06278 1338 aa13.17□□□□□ -0.3
TVP23B-208ENST00000575261 MROH5Q6ZUA9 1318 aa13.17□□□□□ -0.3
TVP23B-208ENST00000575261 GYG1P46976 350 aa13.17□□□□□ -0.3
TVP23B-208ENST00000575261 IREB2P48200 963 aaKnown RBP13.17□□□□□ -0.3
TVP23B-208ENST00000575261 RASA3Q14644 834 aa13.17□□□□□ -0.3
TVP23B-208ENST00000575261 NBPF12Q5TAG4 269 aaPredicted RBP13.17□□□□□ -0.3
TVP23B-208ENST00000575261 IFNL1Q8IU54 200 aa13.17□□□□□ -0.3
TVP23B-208ENST00000575261 TDRD7Q8NHU6 1098 aaKnown RBP13.17□□□□□ -0.3
TVP23B-208ENST00000575261 CLMNQ96JQ2 1002 aa13.17□□□□□ -0.3
TVP23B-208ENST00000575261 TTF2Q9UNY4 1162 aaKnown RBP13.17□□□□□ -0.3
TVP23B-208ENST00000575261 ZNF521Q96K83 1311 aa13.16□□□□□ -0.3
TVP23B-208ENST00000575261 NBPF7P0C2Y1 421 aaPredicted RBP13.16□□□□□ -0.3
TVP23B-208ENST00000575261 SPDYE2Q495Y8 402 aa13.16□□□□□ -0.3
TVP23B-208ENST00000575261 VPS37DQ86XT2 251 aa13.16□□□□□ -0.3
TVP23B-208ENST00000575261 ANKRD13AQ8IZ07 590 aa13.16□□□□□ -0.3
TVP23B-208ENST00000575261 KAZALD1Q96I82 304 aa13.16□□□□□ -0.3
TVP23B-208ENST00000575261 FAM84BQ96KN1 310 aaPredicted RBP13.16□□□□□ -0.3
TVP23B-208ENST00000575261 PUS3Q9BZE2 481 aaKnown RBP13.16□□□□□ -0.3
TVP23B-208ENST00000575261 R3HDMLQ9H3Y0 253 aa13.16□□□□□ -0.3
TVP23B-208ENST00000575261 BICC1Q9H694 974 aaKnown RBP13.16□□□□□ -0.3
TVP23B-208ENST00000575261 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.16□□□□□ -0.3
TVP23B-208ENST00000575261 RIPOR2Q9Y4F9 1068 aa13.16□□□□□ -0.3
TVP23B-208ENST00000575261 PTPRCP08575 1304 aa13.15□□□□□ -0.3
TVP23B-208ENST00000575261 RABL6Q3YEC7 729 aaPredicted RBP13.15□□□□□ -0.3
TVP23B-208ENST00000575261 ZNF70Q9UC06 446 aaPredicted RBP13.15□□□□□ -0.3
TVP23B-208ENST00000575261 IGF2BP3O00425 579 aaKnown RBP eCLIP13.14□□□□□ -0.31
TVP23B-208ENST00000575261 CRKP46108 304 aa13.14□□□□□ -0.31
TVP23B-208ENST00000575261 TNNI2P48788 182 aa13.14□□□□□ -0.31
TVP23B-208ENST00000575261 CAVIN4Q5BKX8 364 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms