RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 EYA2O00167 538 aa24.66■■□□□ 1.54
SCARF1-208ENST00000574545 FOXN1O15353 648 aa24.66■■□□□ 1.54
SCARF1-208ENST00000574545 TRIM27P14373 513 aa24.66■■□□□ 1.54
SCARF1-208ENST00000574545 FGFR2P21802 821 aa24.66■■□□□ 1.54
SCARF1-208ENST00000574545 GBA2Q9HCG7 927 aaPredicted RBP24.66■■□□□ 1.54
SCARF1-208ENST00000574545 HDAC9Q9UKV0 1011 aa24.66■■□□□ 1.54
SCARF1-208ENST00000574545 ATF7IPQ6VMQ6 1270 aa24.65■■□□□ 1.54
SCARF1-208ENST00000574545 PAXIP1Q6ZW49 1069 aaPredicted RBP24.65■■□□□ 1.54
SCARF1-208ENST00000574545 ATG9AQ7Z3C6 839 aa24.65■■□□□ 1.54
SCARF1-208ENST00000574545 MTMR14Q8NCE2 650 aa24.65■■□□□ 1.54
SCARF1-208ENST00000574545 LRRFIP2Q9Y608 721 aaKnown RBP24.65■■□□□ 1.54
SCARF1-208ENST00000574545 IPO8O15397 1037 aaKnown RBP24.64■■□□□ 1.54
SCARF1-208ENST00000574545 HUNKP57058 714 aa24.64■■□□□ 1.54
SCARF1-208ENST00000574545 SCAF8Q9UPN6 1271 aaKnown RBP24.64■■□□□ 1.54
SCARF1-208ENST00000574545 JAG2Q9Y219 1238 aa24.64■■□□□ 1.54
SCARF1-208ENST00000574545 ZBED9Q6R2W3 1325 aa24.63■■□□□ 1.53
SCARF1-208ENST00000574545 AOC2O75106 756 aa24.63■■□□□ 1.53
SCARF1-208ENST00000574545 MAP2K2P36507 400 aa24.63■■□□□ 1.53
SCARF1-208ENST00000574545 MAP2K1Q02750 393 aaPredicted RBP24.63■■□□□ 1.53
SCARF1-208ENST00000574545 C2orf69Q8N8R5 385 aa24.63■■□□□ 1.53
SCARF1-208ENST00000574545 FBXO3Q9UK99 471 aa24.63■■□□□ 1.53
SCARF1-208ENST00000574545 HDAC5Q9UQL6 1122 aa24.63■■□□□ 1.53
SCARF1-208ENST00000574545 IFFO2Q5TF58 517 aa24.62■■□□□ 1.53
SCARF1-208ENST00000574545 PCDHAC2Q9Y5I4 1007 aa24.62■■□□□ 1.53
SCARF1-208ENST00000574545 GRM1Q13255 1194 aa24.61■■□□□ 1.53
SCARF1-208ENST00000574545 CIAO1O76071 339 aa24.6■■□□□ 1.53
SCARF1-208ENST00000574545 PUM3Q15397 648 aaKnown RBP24.6■■□□□ 1.53
SCARF1-208ENST00000574545 RGMBQ6NW40 437 aa24.6■■□□□ 1.53
SCARF1-208ENST00000574545 FRAT1Q92837 279 aaPredicted RBP24.6■■□□□ 1.53
SCARF1-208ENST00000574545 COPRSQ9NQ92 184 aa24.6■■□□□ 1.53
SCARF1-208ENST00000574545 FAM155AB1AL88 458 aaPredicted RBP24.59■■□□□ 1.53
SCARF1-208ENST00000574545 F8W031 263 aaPredicted RBP24.59■■□□□ 1.53
SCARF1-208ENST00000574545 GNAI3P08754 354 aa24.59■■□□□ 1.53
SCARF1-208ENST00000574545 DLGAP5Q15398 846 aa24.59■■□□□ 1.53
SCARF1-208ENST00000574545 CFAP100Q494V2 611 aa24.59■■□□□ 1.53
SCARF1-208ENST00000574545 MFSD14BQ5SR56 506 aa24.59■■□□□ 1.53
SCARF1-208ENST00000574545 PRAMEF18Q5VWM3 479 aa24.59■■□□□ 1.53
SCARF1-208ENST00000574545 PRMT6Q96LA8 375 aaPredicted RBP24.59■■□□□ 1.53
SCARF1-208ENST00000574545 ZIC5Q96T25 663 aa24.59■■□□□ 1.53
SCARF1-208ENST00000574545 CTCFP49711 727 aaPredicted RBP24.58■■□□□ 1.53
SCARF1-208ENST00000574545 BCAMP50895 628 aa24.58■■□□□ 1.53
SCARF1-208ENST00000574545 FKBP1BP68106 108 aa24.58■■□□□ 1.53
SCARF1-208ENST00000574545 MTX1Q13505 466 aa24.58■■□□□ 1.53
SCARF1-208ENST00000574545 CAVIN4Q5BKX8 364 aa24.58■■□□□ 1.53
SCARF1-208ENST00000574545 AIDAQ96BJ3 306 aa24.58■■□□□ 1.53
SCARF1-208ENST00000574545 PA2G4Q9UQ80 394 aaKnown RBP24.58■■□□□ 1.53
SCARF1-208ENST00000574545 SPDYE2BA6NHP3 402 aa24.57■■□□□ 1.52
SCARF1-208ENST00000574545 IFIT1P09914 478 aaKnown RBP24.57■■□□□ 1.52
SCARF1-208ENST00000574545 SPDYE6P0CI01 402 aa24.57■■□□□ 1.52
SCARF1-208ENST00000574545 GRIK5Q16478 980 aa24.57■■□□□ 1.52
SCARF1-208ENST00000574545 ZKSCAN2Q63HK3 967 aa24.57■■□□□ 1.52
SCARF1-208ENST00000574545 APOBEC3FQ8IUX4 373 aaKnown RBP24.57■■□□□ 1.52
SCARF1-208ENST00000574545 LPIN2Q92539 896 aa24.57■■□□□ 1.52
SCARF1-208ENST00000574545 CLUAP1Q96AJ1 413 aa24.57■■□□□ 1.52
SCARF1-208ENST00000574545 SIL1Q9H173 461 aa24.57■■□□□ 1.52
SCARF1-208ENST00000574545 PRDM10Q9NQV6 1147 aa24.57■■□□□ 1.52
SCARF1-208ENST00000574545 IQSEC3Q9UPP2 1182 aaPredicted RBP24.57■■□□□ 1.52
SCARF1-208ENST00000574545 AOX1Q06278 1338 aa24.57■■□□□ 1.52
SCARF1-208ENST00000574545 VPS37DQ86XT2 251 aa24.56■■□□□ 1.52
SCARF1-208ENST00000574545 HSPA8P11142 646 aaKnown RBP24.55■■□□□ 1.52
SCARF1-208ENST00000574545 IL15P40933 162 aaPredicted RBP24.55■■□□□ 1.52
SCARF1-208ENST00000574545 NOGQ13253 232 aa24.55■■□□□ 1.52
SCARF1-208ENST00000574545 TMEM57Q8N5G2 664 aa24.55■■□□□ 1.52
SCARF1-208ENST00000574545 TTF2Q9UNY4 1162 aaKnown RBP24.55■■□□□ 1.52
SCARF1-208ENST00000574545 MOB2Q70IA6 237 aa24.54■■□□□ 1.52
SCARF1-208ENST00000574545 CCDC102AQ96A19 550 aa24.54■■□□□ 1.52
SCARF1-208ENST00000574545 CEP126Q9P2H0 1117 aa24.54■■□□□ 1.52
SCARF1-208ENST00000574545 SERPINA10Q9UK55 444 aa24.54■■□□□ 1.52
SCARF1-208ENST00000574545 PAPPA2Q9BXP8 1791 aa24.54■■□□□ 1.52
SCARF1-208ENST00000574545 SLC5A1P13866 664 aa24.53■■□□□ 1.52
SCARF1-208ENST00000574545 ZNF157P51786 506 aaPredicted RBP24.53■■□□□ 1.52
SCARF1-208ENST00000574545 LBX1P52954 281 aa24.53■■□□□ 1.52
SCARF1-208ENST00000574545 DEFB129Q9H1M3 183 aa24.53■■□□□ 1.52
SCARF1-208ENST00000574545 SLC10A3P09131 477 aa24.52■■□□□ 1.52
SCARF1-208ENST00000574545 TBC1D22AQ8WUA7 517 aa24.52■■□□□ 1.52
SCARF1-208ENST00000574545 ARAP2Q8WZ64 1704 aa24.52■■□□□ 1.52
SCARF1-208ENST00000574545 ECM29Q5VYK3 1845 aa24.51■■□□□ 1.51
SCARF1-208ENST00000574545 SRGAP3O43295 1099 aa24.51■■□□□ 1.51
SCARF1-208ENST00000574545 GNAI2P04899 355 aa24.51■■□□□ 1.51
SCARF1-208ENST00000574545 CHAF1AQ13111 956 aaPredicted RBP24.51■■□□□ 1.51
SCARF1-208ENST00000574545 COL1A1P02452 1464 aaPredicted RBP24.51■■□□□ 1.51
SCARF1-208ENST00000574545 CLRN2A0PK11 232 aa24.5■■□□□ 1.51
SCARF1-208ENST00000574545 UBE2Q2LH0YL09 131 aa24.5■■□□□ 1.51
SCARF1-208ENST00000574545 ZBTB22O15209 634 aa24.5■■□□□ 1.51
SCARF1-208ENST00000574545 HDLBPQ00341 1268 aaKnown RBP24.5■■□□□ 1.51
SCARF1-208ENST00000574545 ATP2B3Q16720 1220 aa24.5■■□□□ 1.51
SCARF1-208ENST00000574545 MRIQ9BWK5 157 aa24.5■■□□□ 1.51
SCARF1-208ENST00000574545 MYO1BO43795 1136 aa24.49■■□□□ 1.51
SCARF1-208ENST00000574545 FRAT2O75474 233 aaPredicted RBP24.49■■□□□ 1.51
SCARF1-208ENST00000574545 CRKP46108 304 aa24.49■■□□□ 1.51
SCARF1-208ENST00000574545 RBM5P52756 815 aaKnown RBP eCLIP24.49■■□□□ 1.51
SCARF1-208ENST00000574545 KIF23Q02241 960 aaPredicted RBP24.49■■□□□ 1.51
SCARF1-208ENST00000574545 SPDYE2Q495Y8 402 aa24.49■■□□□ 1.51
SCARF1-208ENST00000574545 RASAL3Q86YV0 1011 aa24.49■■□□□ 1.51
SCARF1-208ENST00000574545 DZIP1LQ8IYY4 767 aaKnown RBP24.49■■□□□ 1.51
SCARF1-208ENST00000574545 BEGAINQ9BUH8 593 aa24.49■■□□□ 1.51
SCARF1-208ENST00000574545 PPP2R3BQ9Y5P8 575 aa24.49■■□□□ 1.51
SCARF1-208ENST00000574545 PNMA6EA0A0J9YXQ4 647 aa24.48■■□□□ 1.51
SCARF1-208ENST00000574545 RLBP1P12271 317 aa24.48■■□□□ 1.51
SCARF1-208ENST00000574545 NF2P35240 595 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms