RNA–Protein interactions for RNA: ENST00000573857.5

TVP23A-208, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-208ENST00000573857 E9PSI1 815 aa18.06■□□□□ 0.48
TVP23A-208ENST00000573857 NBPF7P0C2Y1 421 aaPredicted RBP18.06■□□□□ 0.48
TVP23A-208ENST00000573857 FKBP1AP62942 108 aaKnown RBP18.06■□□□□ 0.48
TVP23A-208ENST00000573857 TTLL12Q14166 644 aaPredicted RBP18.06■□□□□ 0.48
TVP23A-208ENST00000573857 DLGAP5Q15398 846 aa18.06■□□□□ 0.48
TVP23A-208ENST00000573857 MRPL50Q8N5N7 158 aaKnown RBP18.06■□□□□ 0.48
TVP23A-208ENST00000573857 MTMR14Q8NCE2 650 aa18.06■□□□□ 0.48
TVP23A-208ENST00000573857 DGKZQ13574 1117 aa18.05■□□□□ 0.48
TVP23A-208ENST00000573857 PTPRCP08575 1304 aa18.04■□□□□ 0.48
TVP23A-208ENST00000573857 COL1A1P02452 1464 aaPredicted RBP18.04■□□□□ 0.48
TVP23A-208ENST00000573857 PUS3Q9BZE2 481 aaKnown RBP18.04■□□□□ 0.48
TVP23A-208ENST00000573857 BICC1Q9H694 974 aaKnown RBP18.04■□□□□ 0.48
TVP23A-208ENST00000573857 JAG2Q9Y219 1238 aa18.04■□□□□ 0.48
TVP23A-208ENST00000573857 PCDHAC2Q9Y5I4 1007 aa18.04■□□□□ 0.48
TVP23A-208ENST00000573857 F8W031 263 aaPredicted RBP18.03■□□□□ 0.48
TVP23A-208ENST00000573857 UBE4AQ14139 1066 aa18.03■□□□□ 0.48
TVP23A-208ENST00000573857 RABL6Q3YEC7 729 aaPredicted RBP18.03■□□□□ 0.48
TVP23A-208ENST00000573857 CFAP100Q494V2 611 aa18.03■□□□□ 0.48
TVP23A-208ENST00000573857 ARMC9Q7Z3E5 817 aa18.03■□□□□ 0.48
TVP23A-208ENST00000573857 DEFB129Q9H1M3 183 aa18.03■□□□□ 0.48
TVP23A-208ENST00000573857 FAM205AQ6ZU69 1335 aa18.02■□□□□ 0.48
TVP23A-208ENST00000573857 SPDYE2BA6NHP3 402 aa18.02■□□□□ 0.48
TVP23A-208ENST00000573857 SPDYE6P0CI01 402 aa18.02■□□□□ 0.48
TVP23A-208ENST00000573857 PTPN12Q05209 780 aaKnown RBP18.02■□□□□ 0.48
TVP23A-208ENST00000573857 TDRD7Q8NHU6 1098 aaKnown RBP18.02■□□□□ 0.48
TVP23A-208ENST00000573857 SSH1Q8WYL5 1049 aa18.02■□□□□ 0.48
TVP23A-208ENST00000573857 RIPOR2Q9Y4F9 1068 aa18.02■□□□□ 0.48
TVP23A-208ENST00000573857 AKAP11Q9UKA4 1901 aa18.02■□□□□ 0.47
TVP23A-208ENST00000573857 MROH5Q6ZUA9 1318 aa18.01■□□□□ 0.47
TVP23A-208ENST00000573857 MYO1BO43795 1136 aa18.01■□□□□ 0.47
TVP23A-208ENST00000573857 HIBADHP31937 336 aaKnown RBP18.01■□□□□ 0.47
TVP23A-208ENST00000573857 GYG1P46976 350 aa18.01■□□□□ 0.47
TVP23A-208ENST00000573857 SLFN5Q08AF3 891 aa18.01■□□□□ 0.47
TVP23A-208ENST00000573857 PRKG1Q13976 671 aa18.01■□□□□ 0.47
TVP23A-208ENST00000573857 LDLRAD1Q5T700 205 aa18.01■□□□□ 0.47
TVP23A-208ENST00000573857 ANKRD44Q8N8A2 993 aa18.01■□□□□ 0.47
TVP23A-208ENST00000573857 FAM84BQ96KN1 310 aaPredicted RBP18.01■□□□□ 0.47
TVP23A-208ENST00000573857 PPP2R3BQ9Y5P8 575 aa18.01■□□□□ 0.47
TVP23A-208ENST00000573857 CLRN2A0PK11 232 aa18■□□□□ 0.47
TVP23A-208ENST00000573857 PRMT6Q96LA8 375 aaPredicted RBP18■□□□□ 0.47
TVP23A-208ENST00000573857 SSC5DA1L4H1 1573 aa18■□□□□ 0.47
TVP23A-208ENST00000573857 AOX1Q06278 1338 aa17.99■□□□□ 0.47
TVP23A-208ENST00000573857 TM4SF4P48230 202 aa17.99■□□□□ 0.47
TVP23A-208ENST00000573857 MKRN3Q13064 507 aaKnown RBP17.99■□□□□ 0.47
TVP23A-208ENST00000573857 MFSD14BQ5SR56 506 aa17.99■□□□□ 0.47
TVP23A-208ENST00000573857 ANGEL1Q9UNK9 670 aaKnown RBP17.99■□□□□ 0.47
TVP23A-208ENST00000573857 RGS19P49795 217 aa17.98■□□□□ 0.47
TVP23A-208ENST00000573857 RBM5P52756 815 aaKnown RBP eCLIP17.98■□□□□ 0.47
TVP23A-208ENST00000573857 MAP3K11Q16584 847 aa17.98■□□□□ 0.47
TVP23A-208ENST00000573857 LRRC24Q50LG9 513 aa17.98■□□□□ 0.47
TVP23A-208ENST00000573857 USP44Q9H0E7 712 aa17.98■□□□□ 0.47
TVP23A-208ENST00000573857 VEZTQ9HBM0 779 aa17.98■□□□□ 0.47
TVP23A-208ENST00000573857 FZD1Q9UP38 647 aa17.98■□□□□ 0.47
TVP23A-208ENST00000573857 SREBF2Q12772 1141 aa17.97■□□□□ 0.47
TVP23A-208ENST00000573857 ALDH1L2Q3SY69 923 aa17.97■□□□□ 0.47
TVP23A-208ENST00000573857 METTL24Q5JXM2 366 aa17.97■□□□□ 0.47
TVP23A-208ENST00000573857 SPRYD7Q5W111 196 aa17.97■□□□□ 0.47
TVP23A-208ENST00000573857 FBXO33Q7Z6M2 555 aa17.97■□□□□ 0.47
TVP23A-208ENST00000573857 CDCA7LQ96GN5 454 aa17.97■□□□□ 0.47
TVP23A-208ENST00000573857 SERPINA10Q9UK55 444 aa17.97■□□□□ 0.47
TVP23A-208ENST00000573857 TTF2Q9UNY4 1162 aaKnown RBP17.97■□□□□ 0.47
TVP23A-208ENST00000573857 ECM29Q5VYK3 1845 aa17.96■□□□□ 0.47
TVP23A-208ENST00000573857 PPP1R12BO60237 982 aaPredicted RBP17.96■□□□□ 0.47
TVP23A-208ENST00000573857 TBC1D8O95759 1140 aa17.96■□□□□ 0.47
TVP23A-208ENST00000573857 SUPT20HL1Q3ZLR7 823 aa17.96■□□□□ 0.47
TVP23A-208ENST00000573857 CTU1Q7Z7A3 348 aaKnown RBP17.96■□□□□ 0.47
TVP23A-208ENST00000573857 VPS37DQ86XT2 251 aa17.96■□□□□ 0.47
TVP23A-208ENST00000573857 VGLL2Q8N8G2 317 aa17.96■□□□□ 0.47
TVP23A-208ENST00000573857 SMC4Q9NTJ3 1288 aa17.96■□□□□ 0.47
TVP23A-208ENST00000573857 PDE8BO95263 885 aa17.95■□□□□ 0.46
TVP23A-208ENST00000573857 RASA3Q14644 834 aa17.95■□□□□ 0.46
TVP23A-208ENST00000573857 SPDYE2Q495Y8 402 aa17.95■□□□□ 0.46
TVP23A-208ENST00000573857 TRMT2AQ8IZ69 625 aaKnown RBP17.95■□□□□ 0.46
TVP23A-208ENST00000573857 KLHDC4Q8TBB5 520 aa17.95■□□□□ 0.46
TVP23A-208ENST00000573857 MLLT1Q03111 559 aaPredicted RBP17.94■□□□□ 0.46
TVP23A-208ENST00000573857 TNFAIP1Q13829 316 aa17.94■□□□□ 0.46
TVP23A-208ENST00000573857 CAVIN4Q5BKX8 364 aa17.94■□□□□ 0.46
TVP23A-208ENST00000573857 NBPF12Q5TAG4 269 aaPredicted RBP17.94■□□□□ 0.46
TVP23A-208ENST00000573857 ZNF296Q8WUU4 475 aaPredicted RBP17.94■□□□□ 0.46
TVP23A-208ENST00000573857 SLC10A4Q96EP9 437 aa17.94■□□□□ 0.46
TVP23A-208ENST00000573857 CLMNQ96JQ2 1002 aa17.94■□□□□ 0.46
TVP23A-208ENST00000573857 ZNF70Q9UC06 446 aaPredicted RBP17.94■□□□□ 0.46
TVP23A-208ENST00000573857 IQSEC3Q9UPP2 1182 aaPredicted RBP17.94■□□□□ 0.46
TVP23A-208ENST00000573857 ARAP2Q8WZ64 1704 aa17.93■□□□□ 0.46
TVP23A-208ENST00000573857 UNCXA6NJT0 531 aa17.93■□□□□ 0.46
TVP23A-208ENST00000573857 CRKP46108 304 aa17.93■□□□□ 0.46
TVP23A-208ENST00000573857 NOM1Q5C9Z4 860 aaKnown RBP17.93■□□□□ 0.46
TVP23A-208ENST00000573857 DZIP1LQ8IYY4 767 aaKnown RBP17.93■□□□□ 0.46
TVP23A-208ENST00000573857 CFHR5Q9BXR6 569 aa17.93■□□□□ 0.46
TVP23A-208ENST00000573857 TDRD3Q9H7E2 651 aaKnown RBP17.93■□□□□ 0.46
TVP23A-208ENST00000573857 GPR25O00155 361 aa17.92■□□□□ 0.46
TVP23A-208ENST00000573857 FRAT2O75474 233 aaPredicted RBP17.92■□□□□ 0.46
TVP23A-208ENST00000573857 ZBTB48P10074 688 aaPredicted RBP17.92■□□□□ 0.46
TVP23A-208ENST00000573857 IREB2P48200 963 aaKnown RBP17.92■□□□□ 0.46
TVP23A-208ENST00000573857 RFX5P48382 616 aaPredicted RBP17.92■□□□□ 0.46
TVP23A-208ENST00000573857 CHAF1AQ13111 956 aaPredicted RBP17.92■□□□□ 0.46
TVP23A-208ENST00000573857 PUM3Q15397 648 aaKnown RBP17.92■□□□□ 0.46
TVP23A-208ENST00000573857 GRIK5Q16478 980 aa17.92■□□□□ 0.46
TVP23A-208ENST00000573857 TBC1D22AQ8WUA7 517 aa17.92■□□□□ 0.46
TVP23A-208ENST00000573857 WNK4Q96J92 1243 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms