RNA–Protein interactions for RNA: ENST00000573395.1

RAB40B-208, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 517 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-208ENST00000573395 USP44Q9H0E7 712 aa20.43■□□□□ 0.86
RAB40B-208ENST00000573395 JAG2Q9Y219 1238 aa20.43■□□□□ 0.86
RAB40B-208ENST00000573395 HIBADHP31937 336 aaKnown RBP20.42■□□□□ 0.86
RAB40B-208ENST00000573395 PRAMEF18Q5VWM3 479 aa20.42■□□□□ 0.86
RAB40B-208ENST00000573395 API5Q9BZZ5 524 aaKnown RBP20.42■□□□□ 0.86
RAB40B-208ENST00000573395 TSKSQ9UJT2 592 aa20.42■□□□□ 0.86
RAB40B-208ENST00000573395 NOB1Q9ULX3 412 aaKnown RBP20.42■□□□□ 0.86
RAB40B-208ENST00000573395 RIPOR2Q9Y4F9 1068 aa20.42■□□□□ 0.86
RAB40B-208ENST00000573395 MYO1BO43795 1136 aa20.41■□□□□ 0.86
RAB40B-208ENST00000573395 UBTFL1P0CB47 393 aaPredicted RBP20.41■□□□□ 0.86
RAB40B-208ENST00000573395 GYG1P46976 350 aa20.41■□□□□ 0.86
RAB40B-208ENST00000573395 RBM5P52756 815 aaKnown RBP eCLIP20.41■□□□□ 0.86
RAB40B-208ENST00000573395 FKBP1AP62942 108 aaKnown RBP20.41■□□□□ 0.86
RAB40B-208ENST00000573395 CERS5Q8N5B7 392 aa20.41■□□□□ 0.86
RAB40B-208ENST00000573395 FRAT2O75474 233 aaPredicted RBP20.4■□□□□ 0.86
RAB40B-208ENST00000573395 LRRC24Q50LG9 513 aa20.4■□□□□ 0.86
RAB40B-208ENST00000573395 CAVIN4Q5BKX8 364 aa20.4■□□□□ 0.86
RAB40B-208ENST00000573395 A0A1B0GUL6 1792 aa20.39■□□□□ 0.86
RAB40B-208ENST00000573395 FAM155AB1AL88 458 aaPredicted RBP20.39■□□□□ 0.85
RAB40B-208ENST00000573395 SLC10A3P09131 477 aa20.39■□□□□ 0.85
RAB40B-208ENST00000573395 KIF23Q02241 960 aaPredicted RBP20.39■□□□□ 0.85
RAB40B-208ENST00000573395 FAM84BQ96KN1 310 aaPredicted RBP20.39■□□□□ 0.85
RAB40B-208ENST00000573395 ZIC5Q96T25 663 aa20.39■□□□□ 0.85
RAB40B-208ENST00000573395 HDAC5Q9UQL6 1122 aa20.39■□□□□ 0.85
RAB40B-208ENST00000573395 CFAP100Q494V2 611 aa20.38■□□□□ 0.85
RAB40B-208ENST00000573395 MFSD14BQ5SR56 506 aa20.38■□□□□ 0.85
RAB40B-208ENST00000573395 TDRD7Q8NHU6 1098 aaKnown RBP20.38■□□□□ 0.85
RAB40B-208ENST00000573395 KLHDC4Q8TBB5 520 aa20.38■□□□□ 0.85
RAB40B-208ENST00000573395 ZNF646O15015 1829 aaPredicted RBP20.38■□□□□ 0.85
RAB40B-208ENST00000573395 PAPPA2Q9BXP8 1791 aa20.37■□□□□ 0.85
RAB40B-208ENST00000573395 FAM205AQ6ZU69 1335 aa20.37■□□□□ 0.85
RAB40B-208ENST00000573395 KIF16BQ96L93 1317 aa20.37■□□□□ 0.85
RAB40B-208ENST00000573395 UBE2Q2LH0YL09 131 aa20.37■□□□□ 0.85
RAB40B-208ENST00000573395 PDE8BO95263 885 aa20.37■□□□□ 0.85
RAB40B-208ENST00000573395 MOB2Q70IA6 237 aa20.37■□□□□ 0.85
RAB40B-208ENST00000573395 ARMC9Q7Z3E5 817 aa20.37■□□□□ 0.85
RAB40B-208ENST00000573395 MTMR14Q8NCE2 650 aa20.37■□□□□ 0.85
RAB40B-208ENST00000573395 ZBED3Q96IU2 234 aaPredicted RBP20.37■□□□□ 0.85
RAB40B-208ENST00000573395 IFIT1P09914 478 aaKnown RBP20.36■□□□□ 0.85
RAB40B-208ENST00000573395 RARSP54136 660 aaKnown RBP20.36■□□□□ 0.85
RAB40B-208ENST00000573395 PRKG1Q13976 671 aa20.36■□□□□ 0.85
RAB40B-208ENST00000573395 RASAL3Q86YV0 1011 aa20.36■□□□□ 0.85
RAB40B-208ENST00000573395 VEZTQ9HBM0 779 aa20.36■□□□□ 0.85
RAB40B-208ENST00000573395 TTF2Q9UNY4 1162 aaKnown RBP20.36■□□□□ 0.85
RAB40B-208ENST00000573395 CLRN2A0PK11 232 aa20.35■□□□□ 0.85
RAB40B-208ENST00000573395 SPDYE2BA6NHP3 402 aa20.35■□□□□ 0.85
RAB40B-208ENST00000573395 SPDYE6P0CI01 402 aa20.35■□□□□ 0.85
RAB40B-208ENST00000573395 CHAF1AQ13111 956 aaPredicted RBP20.35■□□□□ 0.85
RAB40B-208ENST00000573395 PUM3Q15397 648 aaKnown RBP20.35■□□□□ 0.85
RAB40B-208ENST00000573395 REM2Q8IYK8 340 aaPredicted RBP20.35■□□□□ 0.85
RAB40B-208ENST00000573395 DEFB129Q9H1M3 183 aa20.35■□□□□ 0.85
RAB40B-208ENST00000573395 IQSEC3Q9UPP2 1182 aaPredicted RBP20.35■□□□□ 0.85
RAB40B-208ENST00000573395 EYA2O00167 538 aa20.34■□□□□ 0.85
RAB40B-208ENST00000573395 DIEXFQ68CQ4 756 aaKnown RBP20.34■□□□□ 0.85
RAB40B-208ENST00000573395 FBXO33Q7Z6M2 555 aa20.34■□□□□ 0.85
RAB40B-208ENST00000573395 PCDHAC2Q9Y5I4 1007 aa20.34■□□□□ 0.85
RAB40B-208ENST00000573395 COL1A1P02452 1464 aaPredicted RBP20.33■□□□□ 0.85
RAB40B-208ENST00000573395 IPO8O15397 1037 aaKnown RBP20.33■□□□□ 0.85
RAB40B-208ENST00000573395 SLC5A1P13866 664 aa20.33■□□□□ 0.85
RAB40B-208ENST00000573395 VGLL2Q8N8G2 317 aa20.33■□□□□ 0.85
RAB40B-208ENST00000573395 TBC1D22AQ8WUA7 517 aa20.33■□□□□ 0.85
RAB40B-208ENST00000573395 PRMT6Q96LA8 375 aaPredicted RBP20.33■□□□□ 0.85
RAB40B-208ENST00000573395 PPP2R3BQ9Y5P8 575 aa20.33■□□□□ 0.85
RAB40B-208ENST00000573395 TRPA1O75762 1119 aa20.32■□□□□ 0.84
RAB40B-208ENST00000573395 ARHGAP45Q92619 1136 aa20.32■□□□□ 0.84
RAB40B-208ENST00000573395 SIL1Q9H173 461 aa20.32■□□□□ 0.84
RAB40B-208ENST00000573395 SAGE1Q9NXZ1 904 aa20.32■□□□□ 0.84
RAB40B-208ENST00000573395 SERPINA10Q9UK55 444 aa20.32■□□□□ 0.84
RAB40B-208ENST00000573395 ANGEL1Q9UNK9 670 aaKnown RBP20.32■□□□□ 0.84
RAB40B-208ENST00000573395 LRRFIP2Q9Y608 721 aaKnown RBP20.32■□□□□ 0.84
RAB40B-208ENST00000573395 RFX5P48382 616 aaPredicted RBP20.31■□□□□ 0.84
RAB40B-208ENST00000573395 BCAMP50895 628 aa20.31■□□□□ 0.84
RAB40B-208ENST00000573395 HNRNPUQ00839 825 aaKnown RBP eCLIP20.31■□□□□ 0.84
RAB40B-208ENST00000573395 PTPN12Q05209 780 aaKnown RBP20.31■□□□□ 0.84
RAB40B-208ENST00000573395 TNFAIP1Q13829 316 aa20.31■□□□□ 0.84
RAB40B-208ENST00000573395 SUPT20HL1Q3ZLR7 823 aa20.31■□□□□ 0.84
RAB40B-208ENST00000573395 MIER1Q8N108 512 aa20.31■□□□□ 0.84
RAB40B-208ENST00000573395 FRAT1Q92837 279 aaPredicted RBP20.31■□□□□ 0.84
RAB40B-208ENST00000573395 CSRNP1Q96S65 589 aa20.31■□□□□ 0.84
RAB40B-208ENST00000573395 RNF186Q9NXI6 227 aa20.31■□□□□ 0.84
RAB40B-208ENST00000573395 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.31■□□□□ 0.84
RAB40B-208ENST00000573395 PPP1R12BO60237 982 aaPredicted RBP20.3■□□□□ 0.84
RAB40B-208ENST00000573395 LPIN2Q92539 896 aa20.3■□□□□ 0.84
RAB40B-208ENST00000573395 CEP126Q9P2H0 1117 aa20.3■□□□□ 0.84
RAB40B-208ENST00000573395 FBXO3Q9UK99 471 aa20.3■□□□□ 0.84
RAB40B-208ENST00000573395 GNAI3P08754 354 aa20.29■□□□□ 0.84
RAB40B-208ENST00000573395 MKRN3Q13064 507 aaKnown RBP20.29■□□□□ 0.84
RAB40B-208ENST00000573395 ABHD8Q96I13 439 aa20.29■□□□□ 0.84
RAB40B-208ENST00000573395 MEIS3Q99687 375 aa20.29■□□□□ 0.84
RAB40B-208ENST00000573395 CIAO1O76071 339 aa20.28■□□□□ 0.84
RAB40B-208ENST00000573395 FGFR2P21802 821 aa20.28■□□□□ 0.84
RAB40B-208ENST00000573395 CRKP46108 304 aa20.28■□□□□ 0.84
RAB40B-208ENST00000573395 RASA3Q14644 834 aa20.28■□□□□ 0.84
RAB40B-208ENST00000573395 INTS3Q68E01 1043 aaKnown RBP20.28■□□□□ 0.84
RAB40B-208ENST00000573395 DZIP1LQ8IYY4 767 aaKnown RBP20.28■□□□□ 0.84
RAB40B-208ENST00000573395 TDRD3Q9H7E2 651 aaKnown RBP20.28■□□□□ 0.84
RAB40B-208ENST00000573395 ZNF70Q9UC06 446 aaPredicted RBP20.28■□□□□ 0.84
RAB40B-208ENST00000573395 TNNI2P48788 182 aa20.27■□□□□ 0.84
RAB40B-208ENST00000573395 ATP2B3Q16720 1220 aa20.27■□□□□ 0.84
RAB40B-208ENST00000573395 SPDYE2Q495Y8 402 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms