RNA–Protein interactions for RNA: ENST00000572290.1

NUP88-204, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-204ENST00000572290 MTX1Q13505 466 aa25.09■■□□□ 1.61
NUP88-204ENST00000572290 FBXO33Q7Z6M2 555 aa25.09■■□□□ 1.61
NUP88-204ENST00000572290 COPRSQ9NQ92 184 aa25.09■■□□□ 1.61
NUP88-204ENST00000572290 PA2G4Q9UQ80 394 aaKnown RBP25.09■■□□□ 1.61
NUP88-204ENST00000572290 FAM205AQ6ZU69 1335 aa25.09■■□□□ 1.61
NUP88-204ENST00000572290 PSME4Q14997 1843 aa25.08■■□□□ 1.61
NUP88-204ENST00000572290 SRGAP3O43295 1099 aa25.08■■□□□ 1.61
NUP88-204ENST00000572290 DLK2Q6UY11 383 aa25.08■■□□□ 1.61
NUP88-204ENST00000572290 IL15P40933 162 aaPredicted RBP25.07■■□□□ 1.6
NUP88-204ENST00000572290 NBPF9Q3BBW0 867 aa25.07■■□□□ 1.6
NUP88-204ENST00000572290 LPIN2Q92539 896 aa25.07■■□□□ 1.6
NUP88-204ENST00000572290 CEP126Q9P2H0 1117 aa25.07■■□□□ 1.6
NUP88-204ENST00000572290 TLL2Q9Y6L7 1015 aa25.07■■□□□ 1.6
NUP88-204ENST00000572290 WNT10BO00744 389 aa25.06■■□□□ 1.6
NUP88-204ENST00000572290 SLC5A1P13866 664 aa25.06■■□□□ 1.6
NUP88-204ENST00000572290 VEGFBP49765 207 aa25.06■■□□□ 1.6
NUP88-204ENST00000572290 IFFO2Q5TF58 517 aa25.06■■□□□ 1.6
NUP88-204ENST00000572290 PITPNM2Q9BZ72 1349 aa25.06■■□□□ 1.6
NUP88-204ENST00000572290 F8W031 263 aaPredicted RBP25.05■■□□□ 1.6
NUP88-204ENST00000572290 FRAT2O75474 233 aaPredicted RBP25.05■■□□□ 1.6
NUP88-204ENST00000572290 RLBP1P12271 317 aa25.05■■□□□ 1.6
NUP88-204ENST00000572290 BCAMP50895 628 aa25.05■■□□□ 1.6
NUP88-204ENST00000572290 ITPRIPQ8IWB1 547 aa25.05■■□□□ 1.6
NUP88-204ENST00000572290 MFSD14BQ5SR56 506 aa25.04■■□□□ 1.6
NUP88-204ENST00000572290 IQSEC3Q9UPP2 1182 aaPredicted RBP25.04■■□□□ 1.6
NUP88-204ENST00000572290 DLGAP5Q15398 846 aa25.03■■□□□ 1.6
NUP88-204ENST00000572290 ATP2B3Q16720 1220 aa25.03■■□□□ 1.6
NUP88-204ENST00000572290 PAXIP1Q6ZW49 1069 aaPredicted RBP25.03■■□□□ 1.6
NUP88-204ENST00000572290 SAPCD2Q86UD0 394 aa25.03■■□□□ 1.6
NUP88-204ENST00000572290 ZBED3Q96IU2 234 aaPredicted RBP25.03■■□□□ 1.6
NUP88-204ENST00000572290 CHAF1AQ13111 956 aaPredicted RBP25.02■■□□□ 1.6
NUP88-204ENST00000572290 CDCA5Q96FF9 252 aa25.02■■□□□ 1.6
NUP88-204ENST00000572290 ZNF646O15015 1829 aaPredicted RBP25.02■■□□□ 1.6
NUP88-204ENST00000572290 MTMR14Q8NCE2 650 aa25.01■■□□□ 1.59
NUP88-204ENST00000572290 WDR33Q9C0J8 1336 aaKnown RBP25.01■■□□□ 1.59
NUP88-204ENST00000572290 PNMA6EA0A0J9YXQ4 647 aa25■■□□□ 1.59
NUP88-204ENST00000572290 ZBTB7BO15156 539 aaPredicted RBP25■■□□□ 1.59
NUP88-204ENST00000572290 MS4A1P11836 297 aa25■■□□□ 1.59
NUP88-204ENST00000572290 ECE1P42892 770 aa25■■□□□ 1.59
NUP88-204ENST00000572290 CFAP100Q494V2 611 aa25■■□□□ 1.59
NUP88-204ENST00000572290 C2orf69Q8N8R5 385 aa25■■□□□ 1.59
NUP88-204ENST00000572290 TBC1D22AQ8WUA7 517 aa25■■□□□ 1.59
NUP88-204ENST00000572290 CAPNS2Q96L46 248 aa25■■□□□ 1.59
NUP88-204ENST00000572290 GBA2Q9HCG7 927 aaPredicted RBP25■■□□□ 1.59
NUP88-204ENST00000572290 RCAN3Q9UKA8 241 aa25■■□□□ 1.59
NUP88-204ENST00000572290 SCAF8Q9UPN6 1271 aaKnown RBP25■■□□□ 1.59
NUP88-204ENST00000572290 CYP4F22Q6NT55 531 aa24.99■■□□□ 1.59
NUP88-204ENST00000572290 PANK1Q8TE04 598 aa24.99■■□□□ 1.59
NUP88-204ENST00000572290 HHIPL1Q96JK4 782 aa24.99■■□□□ 1.59
NUP88-204ENST00000572290 TTF2Q9UNY4 1162 aaKnown RBP24.99■■□□□ 1.59
NUP88-204ENST00000572290 HSPA1AP0DMV8 641 aaKnown RBP24.98■■□□□ 1.59
NUP88-204ENST00000572290 HSPA1BP0DMV9 641 aaKnown RBP24.98■■□□□ 1.59
NUP88-204ENST00000572290 GRM1Q13255 1194 aa24.98■■□□□ 1.59
NUP88-204ENST00000572290 RBM5P52756 815 aaKnown RBP eCLIP24.97■■□□□ 1.59
NUP88-204ENST00000572290 HUNKP57058 714 aa24.97■■□□□ 1.59
NUP88-204ENST00000572290 APOBEC3FQ8IUX4 373 aaKnown RBP24.97■■□□□ 1.59
NUP88-204ENST00000572290 C1orf115Q9H7X2 142 aa24.97■■□□□ 1.59
NUP88-204ENST00000572290 PCDHAC2Q9Y5I4 1007 aa24.97■■□□□ 1.59
NUP88-204ENST00000572290 SPDYE2BA6NHP3 402 aa24.96■■□□□ 1.59
NUP88-204ENST00000572290 MYO1BO43795 1136 aa24.96■■□□□ 1.59
NUP88-204ENST00000572290 SPDYE6P0CI01 402 aa24.96■■□□□ 1.59
NUP88-204ENST00000572290 ATP8B2P98198 1209 aa24.96■■□□□ 1.59
NUP88-204ENST00000572290 TFCP2Q12800 502 aa24.96■■□□□ 1.59
NUP88-204ENST00000572290 G3BP1Q13283 466 aaKnown RBP eCLIP24.96■■□□□ 1.59
NUP88-204ENST00000572290 PRMT6Q96LA8 375 aaPredicted RBP24.96■■□□□ 1.59
NUP88-204ENST00000572290 GNL3LQ9NVN8 582 aaKnown RBP24.96■■□□□ 1.59
NUP88-204ENST00000572290 SERPINA10Q9UK55 444 aa24.96■■□□□ 1.59
NUP88-204ENST00000572290 AKAP2Q9Y2D5 859 aa24.96■■□□□ 1.59
NUP88-204ENST00000572290 POLA2Q14181 598 aa24.95■■□□□ 1.58
NUP88-204ENST00000572290 TIMM10P62072 90 aa24.94■■□□□ 1.58
NUP88-204ENST00000572290 GRIK5Q16478 980 aa24.94■■□□□ 1.58
NUP88-204ENST00000572290 PRAMEF18Q5VWM3 479 aa24.94■■□□□ 1.58
NUP88-204ENST00000572290 SSH3Q8TE77 659 aa24.94■■□□□ 1.58
NUP88-204ENST00000572290 A0A1B0GUL7 405 aa24.93■■□□□ 1.58
NUP88-204ENST00000572290 CLRN2A0PK11 232 aa24.93■■□□□ 1.58
NUP88-204ENST00000572290 ADORA1P30542 326 aa24.93■■□□□ 1.58
NUP88-204ENST00000572290 WDR66Q8TBY9 1149 aa24.93■■□□□ 1.58
NUP88-204ENST00000572290 TRPM7Q96QT4 1865 aa24.93■■□□□ 1.58
NUP88-204ENST00000572290 PHKA1P46020 1223 aa24.92■■□□□ 1.58
NUP88-204ENST00000572290 CRKP46108 304 aa24.92■■□□□ 1.58
NUP88-204ENST00000572290 FKBP1BP68106 108 aa24.92■■□□□ 1.58
NUP88-204ENST00000572290 SUGT1Q9Y2Z0 365 aa24.92■■□□□ 1.58
NUP88-204ENST00000572290 NF2P35240 595 aa24.91■■□□□ 1.58
NUP88-204ENST00000572290 HDLBPQ00341 1268 aaKnown RBP24.91■■□□□ 1.58
NUP88-204ENST00000572290 CCDC102BQ68D86 513 aa24.91■■□□□ 1.58
NUP88-204ENST00000572290 RGMBQ6NW40 437 aa24.91■■□□□ 1.58
NUP88-204ENST00000572290 DEFB129Q9H1M3 183 aa24.91■■□□□ 1.58
NUP88-204ENST00000572290 VEZTQ9HBM0 779 aa24.91■■□□□ 1.58
NUP88-204ENST00000572290 DENND2AQ9ULE3 1009 aa24.91■■□□□ 1.58
NUP88-204ENST00000572290 AOX1Q06278 1338 aa24.9■■□□□ 1.58
NUP88-204ENST00000572290 SEMA3EO15041 775 aa24.9■■□□□ 1.58
NUP88-204ENST00000572290 AOC2O75106 756 aa24.9■■□□□ 1.58
NUP88-204ENST00000572290 MAP2K1Q02750 393 aaPredicted RBP24.9■■□□□ 1.58
NUP88-204ENST00000572290 MVPQ14764 893 aaKnown RBP24.9■■□□□ 1.58
NUP88-204ENST00000572290 XAGE2Q96GT9 111 aa24.9■■□□□ 1.58
NUP88-204ENST00000572290 NEUROD6Q96NK8 337 aa24.9■■□□□ 1.58
NUP88-204ENST00000572290 WBP1LQ9NX94 342 aa24.9■■□□□ 1.58
NUP88-204ENST00000572290 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.9■■□□□ 1.58
NUP88-204ENST00000572290 MAST3O60307 1309 aa24.89■■□□□ 1.58
NUP88-204ENST00000572290 ZBTB22O15209 634 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms