RNA–Protein interactions for RNA: ENST00000571058.5

RPA1-203, Transcript of replication protein A1, humanhuman

TSL 4

Gene RPA1, Length 577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-203ENST00000571058 EYA2O00167 538 aa21.56■■□□□ 1.04
RPA1-203ENST00000571058 RFX5P48382 616 aaPredicted RBP21.56■■□□□ 1.04
RPA1-203ENST00000571058 FKBP1BP68106 108 aa21.56■■□□□ 1.04
RPA1-203ENST00000571058 ATF7IPQ6VMQ6 1270 aa21.56■■□□□ 1.04
RPA1-203ENST00000571058 VGLL2Q8N8G2 317 aa21.56■■□□□ 1.04
RPA1-203ENST00000571058 MTMR14Q8NCE2 650 aa21.56■■□□□ 1.04
RPA1-203ENST00000571058 CDCA5Q96FF9 252 aa21.56■■□□□ 1.04
RPA1-203ENST00000571058 ZBED9Q6R2W3 1325 aa21.55■■□□□ 1.04
RPA1-203ENST00000571058 GYG1P46976 350 aa21.55■■□□□ 1.04
RPA1-203ENST00000571058 PUM3Q15397 648 aaKnown RBP21.55■■□□□ 1.04
RPA1-203ENST00000571058 APOBEC3FQ8IUX4 373 aaKnown RBP21.55■■□□□ 1.04
RPA1-203ENST00000571058 CERS5Q8N5B7 392 aa21.55■■□□□ 1.04
RPA1-203ENST00000571058 ZBED3Q96IU2 234 aaPredicted RBP21.55■■□□□ 1.04
RPA1-203ENST00000571058 CIAO1O76071 339 aa21.54■■□□□ 1.04
RPA1-203ENST00000571058 IFIT1P09914 478 aaKnown RBP21.54■■□□□ 1.04
RPA1-203ENST00000571058 TRIM27P14373 513 aa21.54■■□□□ 1.04
RPA1-203ENST00000571058 CTCFP49711 727 aaPredicted RBP21.54■■□□□ 1.04
RPA1-203ENST00000571058 PTPN12Q05209 780 aaKnown RBP21.54■■□□□ 1.04
RPA1-203ENST00000571058 GRM1Q13255 1194 aa21.54■■□□□ 1.04
RPA1-203ENST00000571058 DLGAP5Q15398 846 aa21.54■■□□□ 1.04
RPA1-203ENST00000571058 IFFO2Q5TF58 517 aa21.54■■□□□ 1.04
RPA1-203ENST00000571058 FBXO33Q7Z6M2 555 aa21.54■■□□□ 1.04
RPA1-203ENST00000571058 KLHDC4Q8TBB5 520 aa21.54■■□□□ 1.04
RPA1-203ENST00000571058 BEGAINQ9BUH8 593 aa21.54■■□□□ 1.04
RPA1-203ENST00000571058 LRRFIP2Q9Y608 721 aaKnown RBP21.54■■□□□ 1.04
RPA1-203ENST00000571058 FOXN1O15353 648 aa21.53■■□□□ 1.04
RPA1-203ENST00000571058 MYO1BO43795 1136 aa21.53■■□□□ 1.04
RPA1-203ENST00000571058 NOGQ13253 232 aa21.53■■□□□ 1.04
RPA1-203ENST00000571058 MFSD14BQ5SR56 506 aa21.53■■□□□ 1.04
RPA1-203ENST00000571058 DLK2Q6UY11 383 aa21.53■■□□□ 1.04
RPA1-203ENST00000571058 FRAT1Q92837 279 aaPredicted RBP21.53■■□□□ 1.04
RPA1-203ENST00000571058 CCDC102AQ96A19 550 aa21.53■■□□□ 1.04
RPA1-203ENST00000571058 MEIS3Q99687 375 aa21.53■■□□□ 1.04
RPA1-203ENST00000571058 BCAR3O75815 825 aa21.52■■□□□ 1.04
RPA1-203ENST00000571058 NF2P35240 595 aa21.52■■□□□ 1.04
RPA1-203ENST00000571058 RGMBQ6NW40 437 aa21.52■■□□□ 1.04
RPA1-203ENST00000571058 TBC1D22AQ8WUA7 517 aa21.52■■□□□ 1.04
RPA1-203ENST00000571058 PRDM10Q9NQV6 1147 aa21.52■■□□□ 1.04
RPA1-203ENST00000571058 COL1A1P02452 1464 aaPredicted RBP21.52■■□□□ 1.03
RPA1-203ENST00000571058 PAPPA2Q9BXP8 1791 aa21.51■■□□□ 1.03
RPA1-203ENST00000571058 ECM29Q5VYK3 1845 aa21.51■■□□□ 1.03
RPA1-203ENST00000571058 SLC5A1P13866 664 aa21.51■■□□□ 1.03
RPA1-203ENST00000571058 COL13A1Q5TAT6 717 aaPredicted RBP21.51■■□□□ 1.03
RPA1-203ENST00000571058 ZKSCAN2Q63HK3 967 aa21.51■■□□□ 1.03
RPA1-203ENST00000571058 LPIN2Q92539 896 aa21.51■■□□□ 1.03
RPA1-203ENST00000571058 ARAP2Q8WZ64 1704 aa21.51■■□□□ 1.03
RPA1-203ENST00000571058 CA12O43570 354 aa21.5■■□□□ 1.03
RPA1-203ENST00000571058 FRAT2O75474 233 aaPredicted RBP21.5■■□□□ 1.03
RPA1-203ENST00000571058 FGFR2P21802 821 aa21.5■■□□□ 1.03
RPA1-203ENST00000571058 IL15P40933 162 aaPredicted RBP21.5■■□□□ 1.03
RPA1-203ENST00000571058 ATG9AQ7Z3C6 839 aa21.5■■□□□ 1.03
RPA1-203ENST00000571058 COPRSQ9NQ92 184 aa21.5■■□□□ 1.03
RPA1-203ENST00000571058 CEP126Q9P2H0 1117 aa21.5■■□□□ 1.03
RPA1-203ENST00000571058 SPDYE2BA6NHP3 402 aa21.49■■□□□ 1.03
RPA1-203ENST00000571058 F8W031 263 aaPredicted RBP21.49■■□□□ 1.03
RPA1-203ENST00000571058 SPDYE6P0CI01 402 aa21.49■■□□□ 1.03
RPA1-203ENST00000571058 MTX1Q13505 466 aa21.49■■□□□ 1.03
RPA1-203ENST00000571058 SERPINA10Q9UK55 444 aa21.49■■□□□ 1.03
RPA1-203ENST00000571058 PPP2R3BQ9Y5P8 575 aa21.49■■□□□ 1.03
RPA1-203ENST00000571058 AOC2O75106 756 aa21.48■■□□□ 1.03
RPA1-203ENST00000571058 ZNF157P51786 506 aaPredicted RBP21.48■■□□□ 1.03
RPA1-203ENST00000571058 CFAP100Q494V2 611 aa21.48■■□□□ 1.03
RPA1-203ENST00000571058 JAG2Q9Y219 1238 aa21.48■■□□□ 1.03
RPA1-203ENST00000571058 SIL1Q9H173 461 aa21.47■■□□□ 1.03
RPA1-203ENST00000571058 TTF2Q9UNY4 1162 aaKnown RBP21.47■■□□□ 1.03
RPA1-203ENST00000571058 SUGT1Q9Y2Z0 365 aa21.47■■□□□ 1.03
RPA1-203ENST00000571058 SRGAP3O43295 1099 aa21.46■■□□□ 1.03
RPA1-203ENST00000571058 GNAI2P04899 355 aa21.46■■□□□ 1.03
RPA1-203ENST00000571058 BCAMP50895 628 aa21.46■■□□□ 1.03
RPA1-203ENST00000571058 RBM5P52756 815 aaKnown RBP eCLIP21.46■■□□□ 1.03
RPA1-203ENST00000571058 HDLBPQ00341 1268 aaKnown RBP21.46■■□□□ 1.03
RPA1-203ENST00000571058 FAM155AB1AL88 458 aaPredicted RBP21.45■■□□□ 1.02
RPA1-203ENST00000571058 TNFAIP1Q13829 316 aa21.45■■□□□ 1.02
RPA1-203ENST00000571058 ATP2B3Q16720 1220 aa21.45■■□□□ 1.02
RPA1-203ENST00000571058 REM2Q8IYK8 340 aaPredicted RBP21.45■■□□□ 1.02
RPA1-203ENST00000571058 TNS4Q8IZW8 715 aa21.45■■□□□ 1.02
RPA1-203ENST00000571058 CLUAP1Q96AJ1 413 aa21.45■■□□□ 1.02
RPA1-203ENST00000571058 PRMT6Q96LA8 375 aaPredicted RBP21.45■■□□□ 1.02
RPA1-203ENST00000571058 DEFB129Q9H1M3 183 aa21.45■■□□□ 1.02
RPA1-203ENST00000571058 GNL3LQ9NVN8 582 aaKnown RBP21.45■■□□□ 1.02
RPA1-203ENST00000571058 MAST3O60307 1309 aa21.45■■□□□ 1.02
RPA1-203ENST00000571058 SLC10A3P09131 477 aa21.44■■□□□ 1.02
RPA1-203ENST00000571058 HSPA8P11142 646 aaKnown RBP21.44■■□□□ 1.02
RPA1-203ENST00000571058 CHAF1AQ13111 956 aaPredicted RBP21.44■■□□□ 1.02
RPA1-203ENST00000571058 FTSJ3Q8IY81 847 aaKnown RBP21.44■■□□□ 1.02
RPA1-203ENST00000571058 MRIQ9BWK5 157 aa21.44■■□□□ 1.02
RPA1-203ENST00000571058 SCAF8Q9UPN6 1271 aaKnown RBP21.44■■□□□ 1.02
RPA1-203ENST00000571058 IQSEC3Q9UPP2 1182 aaPredicted RBP21.44■■□□□ 1.02
RPA1-203ENST00000571058 MYH13Q9UKX3 1938 aa21.43■■□□□ 1.02
RPA1-203ENST00000571058 ZBTB22O15209 634 aa21.43■■□□□ 1.02
RPA1-203ENST00000571058 LBX1P52954 281 aa21.43■■□□□ 1.02
RPA1-203ENST00000571058 TTLL12Q14166 644 aaPredicted RBP21.43■■□□□ 1.02
RPA1-203ENST00000571058 ARMC9Q7Z3E5 817 aa21.43■■□□□ 1.02
RPA1-203ENST00000571058 TMEM57Q8N5G2 664 aa21.43■■□□□ 1.02
RPA1-203ENST00000571058 WDR66Q8TBY9 1149 aa21.43■■□□□ 1.02
RPA1-203ENST00000571058 CRKP46108 304 aa21.42■■□□□ 1.02
RPA1-203ENST00000571058 PRAMEF18Q5VWM3 479 aa21.42■■□□□ 1.02
RPA1-203ENST00000571058 PA2G4Q9UQ80 394 aaKnown RBP21.42■■□□□ 1.02
RPA1-203ENST00000571058 AKAP2Q9Y2D5 859 aa21.42■■□□□ 1.02
RPA1-203ENST00000571058 CLRN2A0PK11 232 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms