RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 FAM84BQ96KN1 310 aaPredicted RBP6.78□□□□□ -1.32
CHD3-212ENST00000570758 GBA2Q9HCG7 927 aaPredicted RBP6.78□□□□□ -1.32
CHD3-212ENST00000570758 WBP1LQ9NX94 342 aa6.78□□□□□ -1.32
CHD3-212ENST00000570758 THSD7BQ9C0I4 1608 aa6.78□□□□□ -1.32
CHD3-212ENST00000570758 AOX1Q06278 1338 aa6.77□□□□□ -1.32
CHD3-212ENST00000570758 PITPNM2Q9BZ72 1349 aa6.77□□□□□ -1.32
CHD3-212ENST00000570758 F8W031 263 aaPredicted RBP6.77□□□□□ -1.33
CHD3-212ENST00000570758 PDE8BO95263 885 aa6.77□□□□□ -1.33
CHD3-212ENST00000570758 TRIM27P14373 513 aa6.77□□□□□ -1.33
CHD3-212ENST00000570758 FGFR2P21802 821 aa6.77□□□□□ -1.33
CHD3-212ENST00000570758 ECE1P42892 770 aa6.77□□□□□ -1.33
CHD3-212ENST00000570758 BCAMP50895 628 aa6.77□□□□□ -1.33
CHD3-212ENST00000570758 HUNKP57058 714 aa6.77□□□□□ -1.33
CHD3-212ENST00000570758 FKBP1AP62942 108 aaKnown RBP6.77□□□□□ -1.33
CHD3-212ENST00000570758 GRIK5Q16478 980 aa6.77□□□□□ -1.33
CHD3-212ENST00000570758 ATF7IPQ6VMQ6 1270 aa6.77□□□□□ -1.33
CHD3-212ENST00000570758 OGFOD1Q8N543 542 aa6.77□□□□□ -1.33
CHD3-212ENST00000570758 FRAT1Q92837 279 aaPredicted RBP6.77□□□□□ -1.33
CHD3-212ENST00000570758 CLUAP1Q96AJ1 413 aa6.77□□□□□ -1.33
CHD3-212ENST00000570758 HHIPL1Q96JK4 782 aa6.77□□□□□ -1.33
CHD3-212ENST00000570758 ZIC5Q96T25 663 aa6.77□□□□□ -1.33
CHD3-212ENST00000570758 HDAC9Q9UKV0 1011 aa6.77□□□□□ -1.33
CHD3-212ENST00000570758 IQSEC3Q9UPP2 1182 aaPredicted RBP6.77□□□□□ -1.33
CHD3-212ENST00000570758 PA2G4Q9UQ80 394 aaKnown RBP6.77□□□□□ -1.33
CHD3-212ENST00000570758 ZBED9Q6R2W3 1325 aa6.76□□□□□ -1.33
CHD3-212ENST00000570758 FAM155AB1AL88 458 aaPredicted RBP6.76□□□□□ -1.33
CHD3-212ENST00000570758 IPO8O15397 1037 aaKnown RBP6.76□□□□□ -1.33
CHD3-212ENST00000570758 HSPA8P11142 646 aaKnown RBP6.76□□□□□ -1.33
CHD3-212ENST00000570758 CTCFP49711 727 aaPredicted RBP6.76□□□□□ -1.33
CHD3-212ENST00000570758 MMP14P50281 582 aa6.76□□□□□ -1.33
CHD3-212ENST00000570758 CHAF1AQ13111 956 aaPredicted RBP6.76□□□□□ -1.33
CHD3-212ENST00000570758 DLGAP5Q15398 846 aa6.76□□□□□ -1.33
CHD3-212ENST00000570758 CFAP100Q494V2 611 aa6.76□□□□□ -1.33
CHD3-212ENST00000570758 MFSD14BQ5SR56 506 aa6.76□□□□□ -1.33
CHD3-212ENST00000570758 IFFO2Q5TF58 517 aa6.76□□□□□ -1.33
CHD3-212ENST00000570758 RGMBQ6NW40 437 aa6.76□□□□□ -1.33
CHD3-212ENST00000570758 MOB2Q70IA6 237 aa6.76□□□□□ -1.33
CHD3-212ENST00000570758 TMEM57Q8N5G2 664 aa6.76□□□□□ -1.33
CHD3-212ENST00000570758 C2orf69Q8N8R5 385 aa6.76□□□□□ -1.33
CHD3-212ENST00000570758 MTMR14Q8NCE2 650 aa6.76□□□□□ -1.33
CHD3-212ENST00000570758 PRMT6Q96LA8 375 aaPredicted RBP6.76□□□□□ -1.33
CHD3-212ENST00000570758 SIL1Q9H173 461 aa6.76□□□□□ -1.33
CHD3-212ENST00000570758 CLRN2A0PK11 232 aa6.75□□□□□ -1.33
CHD3-212ENST00000570758 SPDYE2BA6NHP3 402 aa6.75□□□□□ -1.33
CHD3-212ENST00000570758 UBE2Q2LH0YL09 131 aa6.75□□□□□ -1.33
CHD3-212ENST00000570758 CIAO1O76071 339 aa6.75□□□□□ -1.33
CHD3-212ENST00000570758 GNAI3P08754 354 aa6.75□□□□□ -1.33
CHD3-212ENST00000570758 IFIT1P09914 478 aaKnown RBP6.75□□□□□ -1.33
CHD3-212ENST00000570758 SPDYE6P0CI01 402 aa6.75□□□□□ -1.33
CHD3-212ENST00000570758 MAP2K2P36507 400 aa6.75□□□□□ -1.33
CHD3-212ENST00000570758 MAP2K1Q02750 393 aaPredicted RBP6.75□□□□□ -1.33
CHD3-212ENST00000570758 PUM3Q15397 648 aaKnown RBP6.75□□□□□ -1.33
CHD3-212ENST00000570758 ZKSCAN2Q63HK3 967 aa6.75□□□□□ -1.33
CHD3-212ENST00000570758 APOBEC3FQ8IUX4 373 aaKnown RBP6.75□□□□□ -1.33
CHD3-212ENST00000570758 AIDAQ96BJ3 306 aa6.75□□□□□ -1.33
CHD3-212ENST00000570758 COPRSQ9NQ92 184 aa6.75□□□□□ -1.33
CHD3-212ENST00000570758 HDAC5Q9UQL6 1122 aa6.75□□□□□ -1.33
CHD3-212ENST00000570758 PAPPA2Q9BXP8 1791 aa6.74□□□□□ -1.33
CHD3-212ENST00000570758 COL1A1P02452 1464 aaPredicted RBP6.74□□□□□ -1.33
CHD3-212ENST00000570758 PNMA6EA0A0J9YXQ4 647 aa6.74□□□□□ -1.33
CHD3-212ENST00000570758 SRGAP3O43295 1099 aa6.74□□□□□ -1.33
CHD3-212ENST00000570758 SLC10A3P09131 477 aa6.74□□□□□ -1.33
CHD3-212ENST00000570758 RLBP1P12271 317 aa6.74□□□□□ -1.33
CHD3-212ENST00000570758 SLC5A1P13866 664 aa6.74□□□□□ -1.33
CHD3-212ENST00000570758 ADORA1P30542 326 aa6.74□□□□□ -1.33
CHD3-212ENST00000570758 IL15P40933 162 aaPredicted RBP6.74□□□□□ -1.33
CHD3-212ENST00000570758 ZNF157P51786 506 aaPredicted RBP6.74□□□□□ -1.33
CHD3-212ENST00000570758 LBX1P52954 281 aa6.74□□□□□ -1.33
CHD3-212ENST00000570758 MTX1Q13505 466 aa6.74□□□□□ -1.33
CHD3-212ENST00000570758 PRKG1Q13976 671 aa6.74□□□□□ -1.33
CHD3-212ENST00000570758 ATP2B3Q16720 1220 aa6.74□□□□□ -1.33
CHD3-212ENST00000570758 CAVIN4Q5BKX8 364 aa6.74□□□□□ -1.33
CHD3-212ENST00000570758 VPS37DQ86XT2 251 aa6.74□□□□□ -1.33
CHD3-212ENST00000570758 RASAL3Q86YV0 1011 aa6.74□□□□□ -1.33
CHD3-212ENST00000570758 LPIN2Q92539 896 aa6.74□□□□□ -1.33
CHD3-212ENST00000570758 DEFB129Q9H1M3 183 aa6.74□□□□□ -1.33
CHD3-212ENST00000570758 PRDM10Q9NQV6 1147 aa6.74□□□□□ -1.33
CHD3-212ENST00000570758 CEP126Q9P2H0 1117 aa6.74□□□□□ -1.33
CHD3-212ENST00000570758 TSKSQ9UJT2 592 aa6.74□□□□□ -1.33
CHD3-212ENST00000570758 FBXO3Q9UK99 471 aa6.74□□□□□ -1.33
CHD3-212ENST00000570758 TTF2Q9UNY4 1162 aaKnown RBP6.74□□□□□ -1.33
CHD3-212ENST00000570758 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.74□□□□□ -1.33
CHD3-212ENST00000570758 SSC5DA1L4H1 1573 aa6.74□□□□□ -1.33
CHD3-212ENST00000570758 ARAP2Q8WZ64 1704 aa6.73□□□□□ -1.33
CHD3-212ENST00000570758 FRAT2O75474 233 aaPredicted RBP6.73□□□□□ -1.33
CHD3-212ENST00000570758 GNAI2P04899 355 aa6.73□□□□□ -1.33
CHD3-212ENST00000570758 PHKA1P46020 1223 aa6.73□□□□□ -1.33
CHD3-212ENST00000570758 CRKP46108 304 aa6.73□□□□□ -1.33
CHD3-212ENST00000570758 RBM5P52756 815 aaKnown RBP eCLIP6.73□□□□□ -1.33
CHD3-212ENST00000570758 FKBP1BP68106 108 aa6.73□□□□□ -1.33
CHD3-212ENST00000570758 KIF23Q02241 960 aaPredicted RBP6.73□□□□□ -1.33
CHD3-212ENST00000570758 TFCP2Q12800 502 aa6.73□□□□□ -1.33
CHD3-212ENST00000570758 NOGQ13253 232 aa6.73□□□□□ -1.33
CHD3-212ENST00000570758 SPDYE2Q495Y8 402 aa6.73□□□□□ -1.33
CHD3-212ENST00000570758 DZIP1LQ8IYY4 767 aaKnown RBP6.73□□□□□ -1.33
CHD3-212ENST00000570758 TNS4Q8IZW8 715 aa6.73□□□□□ -1.33
CHD3-212ENST00000570758 TBC1D22AQ8WUA7 517 aa6.73□□□□□ -1.33
CHD3-212ENST00000570758 CCDC102AQ96A19 550 aa6.73□□□□□ -1.33
CHD3-212ENST00000570758 TDRD3Q9H7E2 651 aaKnown RBP6.73□□□□□ -1.33
CHD3-212ENST00000570758 C1orf115Q9H7X2 142 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms