RNA–Protein interactions for RNA: ENST00000569637.6

NIP7-208, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 2 BASIC

Gene NIP7, Length 1,099 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-208ENST00000569637 EYA2O00167 538 aa18.47■□□□□ 0.55
NIP7-208ENST00000569637 BCAR3O75815 825 aa18.47■□□□□ 0.55
NIP7-208ENST00000569637 GNAI3P08754 354 aa18.47■□□□□ 0.55
NIP7-208ENST00000569637 TRIM27P14373 513 aa18.47■□□□□ 0.55
NIP7-208ENST00000569637 HUNKP57058 714 aa18.47■□□□□ 0.55
NIP7-208ENST00000569637 MAP2K1Q02750 393 aaPredicted RBP18.47■□□□□ 0.55
NIP7-208ENST00000569637 ATF7IPQ6VMQ6 1270 aa18.47■□□□□ 0.55
NIP7-208ENST00000569637 VPS37DQ86XT2 251 aa18.47■□□□□ 0.55
NIP7-208ENST00000569637 CERS5Q8N5B7 392 aa18.47■□□□□ 0.55
NIP7-208ENST00000569637 TDRD7Q8NHU6 1098 aaKnown RBP18.47■□□□□ 0.55
NIP7-208ENST00000569637 FRAT1Q92837 279 aaPredicted RBP18.47■□□□□ 0.55
NIP7-208ENST00000569637 FAM84BQ96KN1 310 aaPredicted RBP18.47■□□□□ 0.55
NIP7-208ENST00000569637 MEIS3Q99687 375 aa18.47■□□□□ 0.55
NIP7-208ENST00000569637 LRRFIP2Q9Y608 721 aaKnown RBP18.47■□□□□ 0.55
NIP7-208ENST00000569637 FAM205AQ6ZU69 1335 aa18.47■□□□□ 0.55
NIP7-208ENST00000569637 PTPN12Q05209 780 aaKnown RBP18.46■□□□□ 0.55
NIP7-208ENST00000569637 PUM3Q15397 648 aaKnown RBP18.46■□□□□ 0.55
NIP7-208ENST00000569637 CAVIN4Q5BKX8 364 aa18.46■□□□□ 0.55
NIP7-208ENST00000569637 WBP1LQ9NX94 342 aa18.46■□□□□ 0.55
NIP7-208ENST00000569637 FBXO3Q9UK99 471 aa18.46■□□□□ 0.55
NIP7-208ENST00000569637 MAP2K2P36507 400 aa18.45■□□□□ 0.54
NIP7-208ENST00000569637 DLGAP5Q15398 846 aa18.45■□□□□ 0.54
NIP7-208ENST00000569637 APOBEC3FQ8IUX4 373 aaKnown RBP18.45■□□□□ 0.54
NIP7-208ENST00000569637 JAG2Q9Y219 1238 aa18.45■□□□□ 0.54
NIP7-208ENST00000569637 COL1A1P02452 1464 aaPredicted RBP18.45■□□□□ 0.54
NIP7-208ENST00000569637 F8W031 263 aaPredicted RBP18.44■□□□□ 0.54
NIP7-208ENST00000569637 FOXN1O15353 648 aa18.44■□□□□ 0.54
NIP7-208ENST00000569637 CIAO1O76071 339 aa18.44■□□□□ 0.54
NIP7-208ENST00000569637 IFIT1P09914 478 aaKnown RBP18.44■□□□□ 0.54
NIP7-208ENST00000569637 MFSD14BQ5SR56 506 aa18.44■□□□□ 0.54
NIP7-208ENST00000569637 FBXO33Q7Z6M2 555 aa18.44■□□□□ 0.54
NIP7-208ENST00000569637 MTMR14Q8NCE2 650 aa18.44■□□□□ 0.54
NIP7-208ENST00000569637 ZBED3Q96IU2 234 aaPredicted RBP18.44■□□□□ 0.54
NIP7-208ENST00000569637 CTCFP49711 727 aaPredicted RBP18.43■□□□□ 0.54
NIP7-208ENST00000569637 FKBP1BP68106 108 aa18.43■□□□□ 0.54
NIP7-208ENST00000569637 ZKSCAN2Q63HK3 967 aa18.43■□□□□ 0.54
NIP7-208ENST00000569637 RGMBQ6NW40 437 aa18.43■□□□□ 0.54
NIP7-208ENST00000569637 BEGAINQ9BUH8 593 aa18.43■□□□□ 0.54
NIP7-208ENST00000569637 PCNTO95613 3336 aa18.43■□□□□ 0.54
NIP7-208ENST00000569637 MYO1BO43795 1136 aa18.42■□□□□ 0.54
NIP7-208ENST00000569637 AOC2O75106 756 aa18.42■□□□□ 0.54
NIP7-208ENST00000569637 FRAT2O75474 233 aaPredicted RBP18.42■□□□□ 0.54
NIP7-208ENST00000569637 SLC5A1P13866 664 aa18.42■□□□□ 0.54
NIP7-208ENST00000569637 FGFR2P21802 821 aa18.42■□□□□ 0.54
NIP7-208ENST00000569637 COL13A1Q5TAT6 717 aaPredicted RBP18.42■□□□□ 0.54
NIP7-208ENST00000569637 ATG9AQ7Z3C6 839 aa18.42■□□□□ 0.54
NIP7-208ENST00000569637 LPIN2Q92539 896 aa18.42■□□□□ 0.54
NIP7-208ENST00000569637 CLUAP1Q96AJ1 413 aa18.42■□□□□ 0.54
NIP7-208ENST00000569637 SIL1Q9H173 461 aa18.42■□□□□ 0.54
NIP7-208ENST00000569637 SCAF8Q9UPN6 1271 aaKnown RBP18.42■□□□□ 0.54
NIP7-208ENST00000569637 AKAP11Q9UKA4 1901 aa18.41■□□□□ 0.54
NIP7-208ENST00000569637 NF2P35240 595 aa18.41■□□□□ 0.54
NIP7-208ENST00000569637 NOGQ13253 232 aa18.41■□□□□ 0.54
NIP7-208ENST00000569637 CFAP100Q494V2 611 aa18.41■□□□□ 0.54
NIP7-208ENST00000569637 IFFO2Q5TF58 517 aa18.41■□□□□ 0.54
NIP7-208ENST00000569637 TBC1D22AQ8WUA7 517 aa18.41■□□□□ 0.54
NIP7-208ENST00000569637 SPDYE2BA6NHP3 402 aa18.4■□□□□ 0.54
NIP7-208ENST00000569637 SPDYE6P0CI01 402 aa18.4■□□□□ 0.54
NIP7-208ENST00000569637 IL15P40933 162 aaPredicted RBP18.4■□□□□ 0.54
NIP7-208ENST00000569637 RBM5P52756 815 aaKnown RBP eCLIP18.4■□□□□ 0.54
NIP7-208ENST00000569637 CCDC102AQ96A19 550 aa18.4■□□□□ 0.54
NIP7-208ENST00000569637 COPRSQ9NQ92 184 aa18.4■□□□□ 0.54
NIP7-208ENST00000569637 CEP126Q9P2H0 1117 aa18.4■□□□□ 0.54
NIP7-208ENST00000569637 TTF2Q9UNY4 1162 aaKnown RBP18.4■□□□□ 0.54
NIP7-208ENST00000569637 IQSEC3Q9UPP2 1182 aaPredicted RBP18.4■□□□□ 0.54
NIP7-208ENST00000569637 TNNQ9UQP3 1299 aa18.4■□□□□ 0.54
NIP7-208ENST00000569637 SRGAP3O43295 1099 aa18.39■□□□□ 0.53
NIP7-208ENST00000569637 BCAMP50895 628 aa18.39■□□□□ 0.53
NIP7-208ENST00000569637 ZNF157P51786 506 aaPredicted RBP18.39■□□□□ 0.53
NIP7-208ENST00000569637 CHAF1AQ13111 956 aaPredicted RBP18.39■□□□□ 0.53
NIP7-208ENST00000569637 MTX1Q13505 466 aa18.39■□□□□ 0.53
NIP7-208ENST00000569637 SERPINA10Q9UK55 444 aa18.39■□□□□ 0.53
NIP7-208ENST00000569637 GNAI2P04899 355 aa18.38■□□□□ 0.53
NIP7-208ENST00000569637 ATP2B3Q16720 1220 aa18.38■□□□□ 0.53
NIP7-208ENST00000569637 PRAMEF18Q5VWM3 479 aa18.38■□□□□ 0.53
NIP7-208ENST00000569637 FTSJ3Q8IY81 847 aaKnown RBP18.38■□□□□ 0.53
NIP7-208ENST00000569637 TMEM57Q8N5G2 664 aa18.38■□□□□ 0.53
NIP7-208ENST00000569637 PRDM10Q9NQV6 1147 aa18.38■□□□□ 0.53
NIP7-208ENST00000569637 PA2G4Q9UQ80 394 aaKnown RBP18.38■□□□□ 0.53
NIP7-208ENST00000569637 PPP2R3BQ9Y5P8 575 aa18.38■□□□□ 0.53
NIP7-208ENST00000569637 FAM155AB1AL88 458 aaPredicted RBP18.37■□□□□ 0.53
NIP7-208ENST00000569637 TTLL12Q14166 644 aaPredicted RBP18.37■□□□□ 0.53
NIP7-208ENST00000569637 PRMT6Q96LA8 375 aaPredicted RBP18.37■□□□□ 0.53
NIP7-208ENST00000569637 PCDHAC2Q9Y5I4 1007 aa18.37■□□□□ 0.53
NIP7-208ENST00000569637 CLRN2A0PK11 232 aa18.36■□□□□ 0.53
NIP7-208ENST00000569637 CA12O43570 354 aa18.36■□□□□ 0.53
NIP7-208ENST00000569637 MAST3O60307 1309 aa18.36■□□□□ 0.53
NIP7-208ENST00000569637 SLC10A3P09131 477 aa18.36■□□□□ 0.53
NIP7-208ENST00000569637 HSPA8P11142 646 aaKnown RBP18.36■□□□□ 0.53
NIP7-208ENST00000569637 TNS4Q8IZW8 715 aa18.36■□□□□ 0.53
NIP7-208ENST00000569637 DEFB129Q9H1M3 183 aa18.36■□□□□ 0.53
NIP7-208ENST00000569637 VEZTQ9HBM0 779 aa18.36■□□□□ 0.53
NIP7-208ENST00000569637 CRKP46108 304 aa18.35■□□□□ 0.53
NIP7-208ENST00000569637 LBX1P52954 281 aa18.35■□□□□ 0.53
NIP7-208ENST00000569637 HDLBPQ00341 1268 aaKnown RBP18.35■□□□□ 0.53
NIP7-208ENST00000569637 TNFAIP1Q13829 316 aa18.35■□□□□ 0.53
NIP7-208ENST00000569637 DZIP1LQ8IYY4 767 aaKnown RBP18.35■□□□□ 0.53
NIP7-208ENST00000569637 GNL3LQ9NVN8 582 aaKnown RBP18.35■□□□□ 0.53
NIP7-208ENST00000569637 SUGT1Q9Y2Z0 365 aa18.35■□□□□ 0.53
NIP7-208ENST00000569637 SPDYE2Q495Y8 402 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms