RNA–Protein interactions for RNA: ENST00000569093.1

CCNF-205, Transcript of cyclin F, humanhuman

TSL 2

Gene CCNF, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-205ENST00000569093 HDAC9Q9UKV0 1011 aa31.61■■■□□ 2.65
CCNF-205ENST00000569093 F8W031 263 aaPredicted RBP31.6■■■□□ 2.65
CCNF-205ENST00000569093 CDCA5Q96FF9 252 aa31.6■■■□□ 2.65
CCNF-205ENST00000569093 SIL1Q9H173 461 aa31.6■■■□□ 2.65
CCNF-205ENST00000569093 ATG9AQ7Z3C6 839 aa31.59■■■□□ 2.65
CCNF-205ENST00000569093 FBXO33Q7Z6M2 555 aa31.59■■■□□ 2.65
CCNF-205ENST00000569093 HDAC5Q9UQL6 1122 aa31.59■■■□□ 2.65
CCNF-205ENST00000569093 FAM205AQ6ZU69 1335 aa31.58■■■□□ 2.65
CCNF-205ENST00000569093 PITPNM2Q9BZ72 1349 aa31.58■■■□□ 2.65
CCNF-205ENST00000569093 ECE1P42892 770 aa31.58■■■□□ 2.65
CCNF-205ENST00000569093 MMP14P50281 582 aa31.58■■■□□ 2.65
CCNF-205ENST00000569093 GBA2Q9HCG7 927 aaPredicted RBP31.58■■■□□ 2.65
CCNF-205ENST00000569093 IQSEC3Q9UPP2 1182 aaPredicted RBP31.58■■■□□ 2.65
CCNF-205ENST00000569093 GNAI3P08754 354 aa31.57■■■□□ 2.64
CCNF-205ENST00000569093 FKBP1AP62942 108 aaKnown RBP31.57■■■□□ 2.64
CCNF-205ENST00000569093 ZKSCAN2Q63HK3 967 aa31.57■■■□□ 2.64
CCNF-205ENST00000569093 ZBED3Q96IU2 234 aaPredicted RBP31.57■■■□□ 2.64
CCNF-205ENST00000569093 PA2G4Q9UQ80 394 aaKnown RBP31.57■■■□□ 2.64
CCNF-205ENST00000569093 PCDHAC2Q9Y5I4 1007 aa31.57■■■□□ 2.64
CCNF-205ENST00000569093 AOC2O75106 756 aa31.56■■■□□ 2.64
CCNF-205ENST00000569093 FGFR2P21802 821 aa31.56■■■□□ 2.64
CCNF-205ENST00000569093 HUNKP57058 714 aa31.56■■■□□ 2.64
CCNF-205ENST00000569093 PRAMEF18Q5VWM3 479 aa31.56■■■□□ 2.64
CCNF-205ENST00000569093 VPS37DQ86XT2 251 aa31.56■■■□□ 2.64
CCNF-205ENST00000569093 C2orf69Q8N8R5 385 aa31.56■■■□□ 2.64
CCNF-205ENST00000569093 BCAMP50895 628 aa31.55■■■□□ 2.64
CCNF-205ENST00000569093 PUM3Q15397 648 aaKnown RBP31.55■■■□□ 2.64
CCNF-205ENST00000569093 HHIPL1Q96JK4 782 aa31.55■■■□□ 2.64
CCNF-205ENST00000569093 WBP1LQ9NX94 342 aa31.55■■■□□ 2.64
CCNF-205ENST00000569093 FOXN1O15353 648 aa31.54■■■□□ 2.64
CCNF-205ENST00000569093 DLGAP5Q15398 846 aa31.54■■■□□ 2.64
CCNF-205ENST00000569093 CAVIN4Q5BKX8 364 aa31.54■■■□□ 2.64
CCNF-205ENST00000569093 COL13A1Q5TAT6 717 aaPredicted RBP31.54■■■□□ 2.64
CCNF-205ENST00000569093 TMEM57Q8N5G2 664 aa31.54■■■□□ 2.64
CCNF-205ENST00000569093 MFSD14BQ5SR56 506 aa31.53■■■□□ 2.64
CCNF-205ENST00000569093 CIAO1O76071 339 aa31.52■■■□□ 2.64
CCNF-205ENST00000569093 CFAP100Q494V2 611 aa31.52■■■□□ 2.64
CCNF-205ENST00000569093 IFIT1P09914 478 aaKnown RBP31.51■■■□□ 2.63
CCNF-205ENST00000569093 CHAF1AQ13111 956 aaPredicted RBP31.51■■■□□ 2.63
CCNF-205ENST00000569093 MTMR14Q8NCE2 650 aa31.51■■■□□ 2.63
CCNF-205ENST00000569093 COPRSQ9NQ92 184 aa31.51■■■□□ 2.63
CCNF-205ENST00000569093 FBXO3Q9UK99 471 aa31.51■■■□□ 2.63
CCNF-205ENST00000569093 FRAT2O75474 233 aaPredicted RBP31.5■■■□□ 2.63
CCNF-205ENST00000569093 LPIN2Q92539 896 aa31.5■■■□□ 2.63
CCNF-205ENST00000569093 CEP126Q9P2H0 1117 aa31.5■■■□□ 2.63
CCNF-205ENST00000569093 THSD7BQ9C0I4 1608 aa31.49■■■□□ 2.63
CCNF-205ENST00000569093 SRGAP3O43295 1099 aa31.49■■■□□ 2.63
CCNF-205ENST00000569093 SLC5A1P13866 664 aa31.49■■■□□ 2.63
CCNF-205ENST00000569093 GRIK5Q16478 980 aa31.49■■■□□ 2.63
CCNF-205ENST00000569093 AIDAQ96BJ3 306 aa31.49■■■□□ 2.63
CCNF-205ENST00000569093 PRMT6Q96LA8 375 aaPredicted RBP31.49■■■□□ 2.63
CCNF-205ENST00000569093 TTF2Q9UNY4 1162 aaKnown RBP31.49■■■□□ 2.63
CCNF-205ENST00000569093 AOX1Q06278 1338 aa31.49■■■□□ 2.63
CCNF-205ENST00000569093 GNAI2P04899 355 aa31.48■■■□□ 2.63
CCNF-205ENST00000569093 RBM5P52756 815 aaKnown RBP eCLIP31.48■■■□□ 2.63
CCNF-205ENST00000569093 MAP2K1Q02750 393 aaPredicted RBP31.48■■■□□ 2.63
CCNF-205ENST00000569093 MAP2K2P36507 400 aa31.47■■■□□ 2.63
CCNF-205ENST00000569093 IL15P40933 162 aaPredicted RBP31.47■■■□□ 2.63
CCNF-205ENST00000569093 MTX1Q13505 466 aa31.47■■■□□ 2.63
CCNF-205ENST00000569093 RGMBQ6NW40 437 aa31.47■■■□□ 2.63
CCNF-205ENST00000569093 MOB2Q70IA6 237 aa31.47■■■□□ 2.63
CCNF-205ENST00000569093 ZIC5Q96T25 663 aa31.47■■■□□ 2.63
CCNF-205ENST00000569093 SPDYE2BA6NHP3 402 aa31.46■■■□□ 2.63
CCNF-205ENST00000569093 SPDYE6P0CI01 402 aa31.46■■■□□ 2.63
CCNF-205ENST00000569093 ATP2B3Q16720 1220 aa31.46■■■□□ 2.63
CCNF-205ENST00000569093 APOBEC3FQ8IUX4 373 aaKnown RBP31.46■■■□□ 2.63
CCNF-205ENST00000569093 CLRN2A0PK11 232 aa31.45■■■□□ 2.63
CCNF-205ENST00000569093 RLBP1P12271 317 aa31.45■■■□□ 2.63
CCNF-205ENST00000569093 ECM29Q5VYK3 1845 aa31.45■■■□□ 2.62
CCNF-205ENST00000569093 ARAP2Q8WZ64 1704 aa31.44■■■□□ 2.62
CCNF-205ENST00000569093 DZIP1LQ8IYY4 767 aaKnown RBP31.44■■■□□ 2.62
CCNF-205ENST00000569093 FAM155AB1AL88 458 aaPredicted RBP31.43■■■□□ 2.62
CCNF-205ENST00000569093 ZNF157P51786 506 aaPredicted RBP31.43■■■□□ 2.62
CCNF-205ENST00000569093 FTSJ3Q8IY81 847 aaKnown RBP31.43■■■□□ 2.62
CCNF-205ENST00000569093 PNMA6EA0A0J9YXQ4 647 aa31.42■■■□□ 2.62
CCNF-205ENST00000569093 CTCFP49711 727 aaPredicted RBP31.42■■■□□ 2.62
CCNF-205ENST00000569093 TBC1D22AQ8WUA7 517 aa31.42■■■□□ 2.62
CCNF-205ENST00000569093 SERPINA10Q9UK55 444 aa31.42■■■□□ 2.62
CCNF-205ENST00000569093 PAPPA2Q9BXP8 1791 aa31.41■■■□□ 2.62
CCNF-205ENST00000569093 UBE2Q2LH0YL09 131 aa31.41■■■□□ 2.62
CCNF-205ENST00000569093 MYO1BO43795 1136 aa31.41■■■□□ 2.62
CCNF-205ENST00000569093 FKBP1BP68106 108 aa31.41■■■□□ 2.62
CCNF-205ENST00000569093 DEFB129Q9H1M3 183 aa31.41■■■□□ 2.62
CCNF-205ENST00000569093 CRKP46108 304 aa31.4■■■□□ 2.62
CCNF-205ENST00000569093 NOGQ13253 232 aa31.4■■■□□ 2.62
CCNF-205ENST00000569093 TTLL12Q14166 644 aaPredicted RBP31.4■■■□□ 2.62
CCNF-205ENST00000569093 VEZTQ9HBM0 779 aa31.4■■■□□ 2.62
CCNF-205ENST00000569093 ADORA1P30542 326 aa31.39■■■□□ 2.62
CCNF-205ENST00000569093 LBX1P52954 281 aa31.39■■■□□ 2.62
CCNF-205ENST00000569093 TIMM10P62072 90 aa31.39■■■□□ 2.62
CCNF-205ENST00000569093 TFCP2Q12800 502 aa31.39■■■□□ 2.62
CCNF-205ENST00000569093 PRKG1Q13976 671 aa31.39■■■□□ 2.62
CCNF-205ENST00000569093 ITPRIPQ8IWB1 547 aa31.39■■■□□ 2.62
CCNF-205ENST00000569093 CCDC102AQ96A19 550 aa31.39■■■□□ 2.62
CCNF-205ENST00000569093 TDRD3Q9H7E2 651 aaKnown RBP31.39■■■□□ 2.62
CCNF-205ENST00000569093 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP31.39■■■□□ 2.62
CCNF-205ENST00000569093 MYH13Q9UKX3 1938 aa31.39■■■□□ 2.62
CCNF-205ENST00000569093 HSPA8P11142 646 aaKnown RBP31.38■■■□□ 2.61
CCNF-205ENST00000569093 NF2P35240 595 aa31.38■■■□□ 2.61
CCNF-205ENST00000569093 IFFO2Q5TF58 517 aa31.38■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms