RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 ARHGAP45Q92619 1136 aa9.83□□□□□ -0.84
CDH3-209ENST00000569080 FAM84BQ96KN1 310 aaPredicted RBP9.83□□□□□ -0.84
CDH3-209ENST00000569080 MEIS3Q99687 375 aa9.83□□□□□ -0.84
CDH3-209ENST00000569080 TNNQ9UQP3 1299 aa9.83□□□□□ -0.84
CDH3-209ENST00000569080 PCDHAC2Q9Y5I4 1007 aa9.83□□□□□ -0.84
CDH3-209ENST00000569080 MYH13Q9UKX3 1938 aa9.83□□□□□ -0.84
CDH3-209ENST00000569080 LAMB1P07942 1786 aa9.83□□□□□ -0.84
CDH3-209ENST00000569080 PDE8BO95263 885 aa9.82□□□□□ -0.84
CDH3-209ENST00000569080 HSPA8P11142 646 aaKnown RBP9.82□□□□□ -0.84
CDH3-209ENST00000569080 FGFR2P21802 821 aa9.82□□□□□ -0.84
CDH3-209ENST00000569080 HUNKP57058 714 aa9.82□□□□□ -0.84
CDH3-209ENST00000569080 INTS3Q68E01 1043 aaKnown RBP9.82□□□□□ -0.84
CDH3-209ENST00000569080 PAXIP1Q6ZW49 1069 aaPredicted RBP9.82□□□□□ -0.84
CDH3-209ENST00000569080 ATG9AQ7Z3C6 839 aa9.82□□□□□ -0.84
CDH3-209ENST00000569080 FBXO33Q7Z6M2 555 aa9.82□□□□□ -0.84
CDH3-209ENST00000569080 OGFOD1Q8N543 542 aa9.82□□□□□ -0.84
CDH3-209ENST00000569080 MTMR14Q8NCE2 650 aa9.82□□□□□ -0.84
CDH3-209ENST00000569080 ZIC5Q96T25 663 aa9.82□□□□□ -0.84
CDH3-209ENST00000569080 JAG2Q9Y219 1238 aa9.82□□□□□ -0.84
CDH3-209ENST00000569080 EYA2O00167 538 aa9.81□□□□□ -0.84
CDH3-209ENST00000569080 BCAR3O75815 825 aa9.81□□□□□ -0.84
CDH3-209ENST00000569080 UBTFL1P0CB47 393 aaPredicted RBP9.81□□□□□ -0.84
CDH3-209ENST00000569080 MAP2K2P36507 400 aa9.81□□□□□ -0.84
CDH3-209ENST00000569080 HNRNPUQ00839 825 aaKnown RBP eCLIP9.81□□□□□ -0.84
CDH3-209ENST00000569080 MAP2K1Q02750 393 aaPredicted RBP9.81□□□□□ -0.84
CDH3-209ENST00000569080 GRM1Q13255 1194 aa9.81□□□□□ -0.84
CDH3-209ENST00000569080 METTL24Q5JXM2 366 aa9.81□□□□□ -0.84
CDH3-209ENST00000569080 PRDM10Q9NQV6 1147 aa9.81□□□□□ -0.84
CDH3-209ENST00000569080 LRRFIP2Q9Y608 721 aaKnown RBP9.81□□□□□ -0.84
CDH3-209ENST00000569080 OTOFQ9HC10 1997 aa9.81□□□□□ -0.84
CDH3-209ENST00000569080 ZBED9Q6R2W3 1325 aa9.81□□□□□ -0.84
CDH3-209ENST00000569080 SPDYE2BA6NHP3 402 aa9.8□□□□□ -0.84
CDH3-209ENST00000569080 SLC10A3P09131 477 aa9.8□□□□□ -0.84
CDH3-209ENST00000569080 SPDYE6P0CI01 402 aa9.8□□□□□ -0.84
CDH3-209ENST00000569080 HIBADHP31937 336 aaKnown RBP9.8□□□□□ -0.84
CDH3-209ENST00000569080 CTCFP49711 727 aaPredicted RBP9.8□□□□□ -0.84
CDH3-209ENST00000569080 FKBP1BP68106 108 aa9.8□□□□□ -0.84
CDH3-209ENST00000569080 PUM3Q15397 648 aaKnown RBP9.8□□□□□ -0.84
CDH3-209ENST00000569080 GRIK5Q16478 980 aa9.8□□□□□ -0.84
CDH3-209ENST00000569080 MFSD14BQ5SR56 506 aa9.8□□□□□ -0.84
CDH3-209ENST00000569080 PRAMEF18Q5VWM3 479 aa9.8□□□□□ -0.84
CDH3-209ENST00000569080 RGMBQ6NW40 437 aa9.8□□□□□ -0.84
CDH3-209ENST00000569080 AIDAQ96BJ3 306 aa9.8□□□□□ -0.84
CDH3-209ENST00000569080 HDAC9Q9UKV0 1011 aa9.8□□□□□ -0.84
CDH3-209ENST00000569080 F8W031 263 aaPredicted RBP9.79□□□□□ -0.84
CDH3-209ENST00000569080 CIAO1O76071 339 aa9.79□□□□□ -0.84
CDH3-209ENST00000569080 LBX1P52954 281 aa9.79□□□□□ -0.84
CDH3-209ENST00000569080 NOGQ13253 232 aa9.79□□□□□ -0.84
CDH3-209ENST00000569080 MTX1Q13505 466 aa9.79□□□□□ -0.84
CDH3-209ENST00000569080 CFAP100Q494V2 611 aa9.79□□□□□ -0.84
CDH3-209ENST00000569080 ATF7IPQ6VMQ6 1270 aa9.79□□□□□ -0.84
CDH3-209ENST00000569080 MOB2Q70IA6 237 aa9.79□□□□□ -0.84
CDH3-209ENST00000569080 RASAL3Q86YV0 1011 aa9.79□□□□□ -0.84
CDH3-209ENST00000569080 APOBEC3FQ8IUX4 373 aaKnown RBP9.79□□□□□ -0.84
CDH3-209ENST00000569080 C2orf69Q8N8R5 385 aa9.79□□□□□ -0.84
CDH3-209ENST00000569080 FBXO3Q9UK99 471 aa9.79□□□□□ -0.84
CDH3-209ENST00000569080 BCAMP50895 628 aa9.78□□□□□ -0.84
CDH3-209ENST00000569080 DLGAP5Q15398 846 aa9.78□□□□□ -0.84
CDH3-209ENST00000569080 TNS4Q8IZW8 715 aa9.78□□□□□ -0.84
CDH3-209ENST00000569080 PRMT6Q96LA8 375 aaPredicted RBP9.78□□□□□ -0.84
CDH3-209ENST00000569080 COPRSQ9NQ92 184 aa9.78□□□□□ -0.84
CDH3-209ENST00000569080 SERPINA10Q9UK55 444 aa9.78□□□□□ -0.84
CDH3-209ENST00000569080 IQSEC3Q9UPP2 1182 aaPredicted RBP9.78□□□□□ -0.84
CDH3-209ENST00000569080 PA2G4Q9UQ80 394 aaKnown RBP9.78□□□□□ -0.84
CDH3-209ENST00000569080 HTTP42858 3142 aa9.78□□□□□ -0.84
CDH3-209ENST00000569080 CLRN2A0PK11 232 aa9.77□□□□□ -0.85
CDH3-209ENST00000569080 ZBTB22O15209 634 aa9.77□□□□□ -0.85
CDH3-209ENST00000569080 LPIN2Q92539 896 aa9.77□□□□□ -0.85
CDH3-209ENST00000569080 CCDC102AQ96A19 550 aa9.77□□□□□ -0.85
CDH3-209ENST00000569080 SIL1Q9H173 461 aa9.77□□□□□ -0.85
CDH3-209ENST00000569080 DEFB129Q9H1M3 183 aa9.77□□□□□ -0.85
CDH3-209ENST00000569080 TSKSQ9UJT2 592 aa9.77□□□□□ -0.85
CDH3-209ENST00000569080 TTF2Q9UNY4 1162 aaKnown RBP9.77□□□□□ -0.85
CDH3-209ENST00000569080 PPP2R3BQ9Y5P8 575 aa9.77□□□□□ -0.85
CDH3-209ENST00000569080 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.77□□□□□ -0.85
CDH3-209ENST00000569080 AKAP11Q9UKA4 1901 aa9.76□□□□□ -0.85
CDH3-209ENST00000569080 IPO8O15397 1037 aaKnown RBP9.76□□□□□ -0.85
CDH3-209ENST00000569080 CA12O43570 354 aa9.76□□□□□ -0.85
CDH3-209ENST00000569080 GNAI3P08754 354 aa9.76□□□□□ -0.85
CDH3-209ENST00000569080 IFIT1P09914 478 aaKnown RBP9.76□□□□□ -0.85
CDH3-209ENST00000569080 IL15P40933 162 aaPredicted RBP9.76□□□□□ -0.85
CDH3-209ENST00000569080 CRKP46108 304 aa9.76□□□□□ -0.85
CDH3-209ENST00000569080 ZNF157P51786 506 aaPredicted RBP9.76□□□□□ -0.85
CDH3-209ENST00000569080 CHAF1AQ13111 956 aaPredicted RBP9.76□□□□□ -0.85
CDH3-209ENST00000569080 SPDYE2Q495Y8 402 aa9.76□□□□□ -0.85
CDH3-209ENST00000569080 CAVIN4Q5BKX8 364 aa9.76□□□□□ -0.85
CDH3-209ENST00000569080 VPS37DQ86XT2 251 aa9.76□□□□□ -0.85
CDH3-209ENST00000569080 TMEM57Q8N5G2 664 aa9.76□□□□□ -0.85
CDH3-209ENST00000569080 FRAT1Q92837 279 aaPredicted RBP9.76□□□□□ -0.85
CDH3-209ENST00000569080 CLUAP1Q96AJ1 413 aa9.76□□□□□ -0.85
CDH3-209ENST00000569080 UBE2Q2LH0YL09 131 aa9.75□□□□□ -0.85
CDH3-209ENST00000569080 SRGAP3O43295 1099 aa9.75□□□□□ -0.85
CDH3-209ENST00000569080 RLBP1P12271 317 aa9.75□□□□□ -0.85
CDH3-209ENST00000569080 SLC5A1P13866 664 aa9.75□□□□□ -0.85
CDH3-209ENST00000569080 ADORA1P30542 326 aa9.75□□□□□ -0.85
CDH3-209ENST00000569080 HDLBPQ00341 1268 aaKnown RBP9.75□□□□□ -0.85
CDH3-209ENST00000569080 KIF23Q02241 960 aaPredicted RBP9.75□□□□□ -0.85
CDH3-209ENST00000569080 MAP3K11Q16584 847 aa9.75□□□□□ -0.85
CDH3-209ENST00000569080 ATP2B3Q16720 1220 aa9.75□□□□□ -0.85
CDH3-209ENST00000569080 LDLRAD1Q5T700 205 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms