RNA–Protein interactions for RNA: ENST00000568890.5

CNEP1R1-210, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 1,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-210ENST00000568890 KDM2BQ8NHM5 1336 aa20.48■□□□□ 0.87
CNEP1R1-210ENST00000568890 COL1A1P02452 1464 aaPredicted RBP20.47■□□□□ 0.87
CNEP1R1-210ENST00000568890 RASGRF1Q13972 1273 aa20.47■□□□□ 0.87
CNEP1R1-210ENST00000568890 SMC5Q8IY18 1101 aa20.47■□□□□ 0.87
CNEP1R1-210ENST00000568890 CLASRPQ8N2M8 674 aaKnown RBP20.47■□□□□ 0.87
CNEP1R1-210ENST00000568890 GPBP1L1Q9HC44 474 aaPredicted RBP20.47■□□□□ 0.87
CNEP1R1-210ENST00000568890 FAM205AQ6ZU69 1335 aa20.47■□□□□ 0.87
CNEP1R1-210ENST00000568890 EGFRP00533 1210 aa20.46■□□□□ 0.87
CNEP1R1-210ENST00000568890 CHAF1AQ13111 956 aaPredicted RBP20.46■□□□□ 0.87
CNEP1R1-210ENST00000568890 GPRC5DQ9NZD1 345 aa20.46■□□□□ 0.87
CNEP1R1-210ENST00000568890 CNOT7Q9UIV1 285 aaKnown RBP20.46■□□□□ 0.87
CNEP1R1-210ENST00000568890 KIF3CO14782 793 aa20.45■□□□□ 0.86
CNEP1R1-210ENST00000568890 FRAT2O75474 233 aaPredicted RBP20.45■□□□□ 0.86
CNEP1R1-210ENST00000568890 MCAMP43121 646 aa20.45■□□□□ 0.86
CNEP1R1-210ENST00000568890 GORABQ5T7V8 394 aa20.45■□□□□ 0.86
CNEP1R1-210ENST00000568890 ANKRD45Q5TZF3 282 aa20.45■□□□□ 0.86
CNEP1R1-210ENST00000568890 OTUD7AQ8TE49 926 aaPredicted RBP20.45■□□□□ 0.86
CNEP1R1-210ENST00000568890 DPF2Q92785 391 aa20.45■□□□□ 0.86
CNEP1R1-210ENST00000568890 POTEIP0CG38 1075 aa20.45■□□□□ 0.86
CNEP1R1-210ENST00000568890 POTEJP0CG39 1038 aa20.45■□□□□ 0.86
CNEP1R1-210ENST00000568890 ARID4AP29374 1257 aaPredicted RBP20.45■□□□□ 0.86
CNEP1R1-210ENST00000568890 GCC1Q96CN9 775 aa20.45■□□□□ 0.86
CNEP1R1-210ENST00000568890 HMG20BQ9P0W2 317 aa20.45■□□□□ 0.86
CNEP1R1-210ENST00000568890 VEGFAP15692 232 aaPredicted RBP20.44■□□□□ 0.86
CNEP1R1-210ENST00000568890 MFSD14BQ5SR56 506 aa20.44■□□□□ 0.86
CNEP1R1-210ENST00000568890 B4GALNT3Q6L9W6 998 aa20.44■□□□□ 0.86
CNEP1R1-210ENST00000568890 KIAA0825Q8IV33 1275 aa20.44■□□□□ 0.86
CNEP1R1-210ENST00000568890 NDUFB9Q9Y6M9 179 aa20.44■□□□□ 0.86
CNEP1R1-210ENST00000568890 HIRAP54198 1017 aaPredicted RBP20.43■□□□□ 0.86
CNEP1R1-210ENST00000568890 MICALL2Q8IY33 904 aa20.43■□□□□ 0.86
CNEP1R1-210ENST00000568890 AGBL3Q8NEM8 1001 aa20.43■□□□□ 0.86
CNEP1R1-210ENST00000568890 TAF1DQ9H5J8 278 aaPredicted RBP20.43■□□□□ 0.86
CNEP1R1-210ENST00000568890 SNRKQ9NRH2 765 aa20.43■□□□□ 0.86
CNEP1R1-210ENST00000568890 ZBTB22O15209 634 aa20.43■□□□□ 0.86
CNEP1R1-210ENST00000568890 SAMD7Q7Z3H4 446 aa20.43■□□□□ 0.86
CNEP1R1-210ENST00000568890 GNL3LQ9NVN8 582 aaKnown RBP20.43■□□□□ 0.86
CNEP1R1-210ENST00000568890 IFIT2P09913 472 aaKnown RBP20.42■□□□□ 0.86
CNEP1R1-210ENST00000568890 RPS12P25398 132 aaKnown RBP20.42■□□□□ 0.86
CNEP1R1-210ENST00000568890 HACL1Q9UJ83 578 aa20.42■□□□□ 0.86
CNEP1R1-210ENST00000568890 PCDHAC2Q9Y5I4 1007 aa20.42■□□□□ 0.86
CNEP1R1-210ENST00000568890 ZNF646O15015 1829 aaPredicted RBP20.42■□□□□ 0.86
CNEP1R1-210ENST00000568890 F8W031 263 aaPredicted RBP20.41■□□□□ 0.86
CNEP1R1-210ENST00000568890 CCDC158Q5M9N0 1113 aa20.41■□□□□ 0.86
CNEP1R1-210ENST00000568890 TBC1D9Q6ZT07 1266 aa20.41■□□□□ 0.86
CNEP1R1-210ENST00000568890 DENND2AQ9ULE3 1009 aa20.41■□□□□ 0.86
CNEP1R1-210ENST00000568890 WDR90Q96KV7 1748 aa20.41■□□□□ 0.86
CNEP1R1-210ENST00000568890 EPHX2P34913 555 aa20.41■□□□□ 0.86
CNEP1R1-210ENST00000568890 TSHZ3Q63HK5 1081 aa20.41■□□□□ 0.86
CNEP1R1-210ENST00000568890 SPATA5Q8NB90 893 aa20.41■□□□□ 0.86
CNEP1R1-210ENST00000568890 TRPM4Q8TD43 1214 aa20.41■□□□□ 0.86
CNEP1R1-210ENST00000568890 ZNF512BQ96KM6 892 aaPredicted RBP20.41■□□□□ 0.86
CNEP1R1-210ENST00000568890 SEMA3EO15041 775 aa20.4■□□□□ 0.86
CNEP1R1-210ENST00000568890 USP17L8P0C7I0 530 aa20.4■□□□□ 0.86
CNEP1R1-210ENST00000568890 PRDX5P30044 214 aa20.4■□□□□ 0.86
CNEP1R1-210ENST00000568890 FKBP1AP62942 108 aaKnown RBP20.4■□□□□ 0.86
CNEP1R1-210ENST00000568890 TTC39AQ5SRH9 613 aa20.4■□□□□ 0.86
CNEP1R1-210ENST00000568890 CYP2E1P05181 493 aaPredicted RBP20.39■□□□□ 0.86
CNEP1R1-210ENST00000568890 ZNF280AP59817 542 aaPredicted RBP20.39■□□□□ 0.86
CNEP1R1-210ENST00000568890 RBM26Q5T8P6 1007 aaKnown RBP20.39■□□□□ 0.86
CNEP1R1-210ENST00000568890 LNPKQ9C0E8 428 aa20.39■□□□□ 0.86
CNEP1R1-210ENST00000568890 ARAP2Q8WZ64 1704 aa20.39■□□□□ 0.85
CNEP1R1-210ENST00000568890 UQCRFS1P1P0C7P4 283 aa20.39■□□□□ 0.85
CNEP1R1-210ENST00000568890 ZAP70P43403 619 aa20.39■□□□□ 0.85
CNEP1R1-210ENST00000568890 NUCB1Q02818 461 aa20.39■□□□□ 0.85
CNEP1R1-210ENST00000568890 TBC1D10BQ4KMP7 808 aaPredicted RBP20.39■□□□□ 0.85
CNEP1R1-210ENST00000568890 WDR66Q8TBY9 1149 aa20.39■□□□□ 0.85
CNEP1R1-210ENST00000568890 SALL3Q9BXA9 1300 aa20.38■□□□□ 0.85
CNEP1R1-210ENST00000568890 IQCA1LA6NCM1 817 aa20.38■□□□□ 0.85
CNEP1R1-210ENST00000568890 ZNF384Q8TF68 577 aa20.38■□□□□ 0.85
CNEP1R1-210ENST00000568890 ANTXR1Q9H6X2 564 aa20.38■□□□□ 0.85
CNEP1R1-210ENST00000568890 LMOD1P29536 600 aaPredicted RBP20.37■□□□□ 0.85
CNEP1R1-210ENST00000568890 ADARB2Q9NS39 739 aaKnown RBP20.37■□□□□ 0.85
CNEP1R1-210ENST00000568890 ASTN2O75129 1339 aaPredicted RBP20.37■□□□□ 0.85
CNEP1R1-210ENST00000568890 AOX1Q06278 1338 aa20.37■□□□□ 0.85
CNEP1R1-210ENST00000568890 MYO3BQ8WXR4 1341 aa20.37■□□□□ 0.85
CNEP1R1-210ENST00000568890 PSME4Q14997 1843 aa20.37■□□□□ 0.85
CNEP1R1-210ENST00000568890 H7C1D1 291 aa20.37■□□□□ 0.85
CNEP1R1-210ENST00000568890 NEFLP07196 543 aa20.37■□□□□ 0.85
CNEP1R1-210ENST00000568890 TBC1D22AQ8WUA7 517 aa20.37■□□□□ 0.85
CNEP1R1-210ENST00000568890 EDC3Q96F86 508 aaKnown RBP20.37■□□□□ 0.85
CNEP1R1-210ENST00000568890 TTF2Q9UNY4 1162 aaKnown RBP20.37■□□□□ 0.85
CNEP1R1-210ENST00000568890 PDS5AQ29RF7 1337 aaKnown RBP20.36■□□□□ 0.85
CNEP1R1-210ENST00000568890 SALL1Q9NSC2 1324 aa20.36■□□□□ 0.85
CNEP1R1-210ENST00000568890 CHD1LQ86WJ1 897 aa20.36■□□□□ 0.85
CNEP1R1-210ENST00000568890 BOLA2Q9H3K6 86 aa20.36■□□□□ 0.85
CNEP1R1-210ENST00000568890 MYOZ2Q9NPC6 264 aa20.36■□□□□ 0.85
CNEP1R1-210ENST00000568890 ABCF2Q9UG63 623 aa20.36■□□□□ 0.85
CNEP1R1-210ENST00000568890 ATP5JP18859 108 aa20.35■□□□□ 0.85
CNEP1R1-210ENST00000568890 NBPF9Q3BBW0 867 aa20.35■□□□□ 0.85
CNEP1R1-210ENST00000568890 EAPPQ56P03 285 aaPredicted RBP20.35■□□□□ 0.85
CNEP1R1-210ENST00000568890 OGFOD1Q8N543 542 aa20.35■□□□□ 0.85
CNEP1R1-210ENST00000568890 PIH1D3Q9NQM4 214 aaKnown RBP20.35■□□□□ 0.85
CNEP1R1-210ENST00000568890 DIXDC1Q155Q3 683 aa20.34■□□□□ 0.85
CNEP1R1-210ENST00000568890 ZBED3Q96IU2 234 aaPredicted RBP20.34■□□□□ 0.85
CNEP1R1-210ENST00000568890 ECHDC1Q9NTX5 307 aa20.34■□□□□ 0.85
CNEP1R1-210ENST00000568890 WNT10BO00744 389 aa20.34■□□□□ 0.85
CNEP1R1-210ENST00000568890 USP50Q70EL3 339 aaPredicted RBP20.34■□□□□ 0.85
CNEP1R1-210ENST00000568890 PI4K2BQ8TCG2 481 aa20.34■□□□□ 0.85
CNEP1R1-210ENST00000568890 PRMT6Q96LA8 375 aaPredicted RBP20.34■□□□□ 0.85
CNEP1R1-210ENST00000568890 AKAP11Q9UKA4 1901 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms