RNA–Protein interactions for RNA: ENST00000568743.1

PKM-221, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-221ENST00000568743 SHTN1A0MZ66 631 aa12.41□□□□□ -0.42
PKM-221ENST00000568743 RASGRF1Q13972 1273 aa12.41□□□□□ -0.42
PKM-221ENST00000568743 SCARF1Q14162 830 aa12.41□□□□□ -0.42
PKM-221ENST00000568743 CCDC158Q5M9N0 1113 aa12.41□□□□□ -0.42
PKM-221ENST00000568743 STRIP1Q5VSL9 837 aa12.41□□□□□ -0.42
PKM-221ENST00000568743 RSBN1LQ6PCB5 846 aaPredicted RBP12.41□□□□□ -0.42
PKM-221ENST00000568743 SMC5Q8IY18 1101 aa12.41□□□□□ -0.42
PKM-221ENST00000568743 C16orf71Q8IYS4 520 aaPredicted RBP12.41□□□□□ -0.42
PKM-221ENST00000568743 CERS5Q8N5B7 392 aa12.41□□□□□ -0.42
PKM-221ENST00000568743 OTUD7AQ8TE49 926 aaPredicted RBP12.41□□□□□ -0.42
PKM-221ENST00000568743 NMRK2Q9NPI5 230 aa12.41□□□□□ -0.42
PKM-221ENST00000568743 SNRKQ9NRH2 765 aa12.41□□□□□ -0.42
PKM-221ENST00000568743 F8W031 263 aaPredicted RBP12.4□□□□□ -0.42
PKM-221ENST00000568743 ARID4AP29374 1257 aaPredicted RBP12.4□□□□□ -0.42
PKM-221ENST00000568743 EPS15P42566 896 aa12.4□□□□□ -0.42
PKM-221ENST00000568743 MCAMP43121 646 aa12.4□□□□□ -0.42
PKM-221ENST00000568743 SCNN1DP51172 638 aa12.4□□□□□ -0.42
PKM-221ENST00000568743 MFSD14BQ5SR56 506 aa12.4□□□□□ -0.42
PKM-221ENST00000568743 TSHZ3Q63HK5 1081 aa12.4□□□□□ -0.42
PKM-221ENST00000568743 ZNF784Q8NCA9 323 aaPredicted RBP12.4□□□□□ -0.42
PKM-221ENST00000568743 L3MBTL3Q96JM7 780 aaPredicted RBP12.4□□□□□ -0.42
PKM-221ENST00000568743 LNPKQ9C0E8 428 aa12.4□□□□□ -0.42
PKM-221ENST00000568743 RRAGCQ9HB90 399 aa12.4□□□□□ -0.42
PKM-221ENST00000568743 HMG20BQ9P0W2 317 aa12.4□□□□□ -0.42
PKM-221ENST00000568743 ZBTB47Q9UFB7 747 aaPredicted RBP12.4□□□□□ -0.42
PKM-221ENST00000568743 FAM205AQ6ZU69 1335 aa12.39□□□□□ -0.43
PKM-221ENST00000568743 POTECB2RU33 542 aa12.39□□□□□ -0.43
PKM-221ENST00000568743 UQCRFS1P1P0C7P4 283 aa12.39□□□□□ -0.43
PKM-221ENST00000568743 NUCB1Q02818 461 aa12.39□□□□□ -0.43
PKM-221ENST00000568743 GRIK5Q16478 980 aa12.39□□□□□ -0.43
PKM-221ENST00000568743 KIAA0825Q8IV33 1275 aa12.39□□□□□ -0.43
PKM-221ENST00000568743 MICALL2Q8IY33 904 aa12.39□□□□□ -0.43
PKM-221ENST00000568743 GMLQ99445 158 aa12.39□□□□□ -0.43
PKM-221ENST00000568743 GPBP1L1Q9HC44 474 aaPredicted RBP12.39□□□□□ -0.43
PKM-221ENST00000568743 DENND2AQ9ULE3 1009 aa12.39□□□□□ -0.43
PKM-221ENST00000568743 NDUFB9Q9Y6M9 179 aa12.39□□□□□ -0.43
PKM-221ENST00000568743 SEMA3EO15041 775 aa12.38□□□□□ -0.43
PKM-221ENST00000568743 RPS12P25398 132 aaKnown RBP12.38□□□□□ -0.43
PKM-221ENST00000568743 LMOD1P29536 600 aaPredicted RBP12.38□□□□□ -0.43
PKM-221ENST00000568743 CHD1LQ86WJ1 897 aa12.38□□□□□ -0.43
PKM-221ENST00000568743 SPATA5Q8NB90 893 aa12.38□□□□□ -0.43
PKM-221ENST00000568743 AGBL3Q8NEM8 1001 aa12.38□□□□□ -0.43
PKM-221ENST00000568743 CCDC136Q96JN2 1154 aa12.38□□□□□ -0.43
PKM-221ENST00000568743 GPRC5DQ9NZD1 345 aa12.38□□□□□ -0.43
PKM-221ENST00000568743 CNOT7Q9UIV1 285 aaKnown RBP12.38□□□□□ -0.43
PKM-221ENST00000568743 ZNF646O15015 1829 aaPredicted RBP12.37□□□□□ -0.43
PKM-221ENST00000568743 ZAP70P43403 619 aa12.37□□□□□ -0.43
PKM-221ENST00000568743 RBM26Q5T8P6 1007 aaKnown RBP12.37□□□□□ -0.43
PKM-221ENST00000568743 TBC1D9Q6ZT07 1266 aa12.37□□□□□ -0.43
PKM-221ENST00000568743 WDR66Q8TBY9 1149 aa12.37□□□□□ -0.43
PKM-221ENST00000568743 DPF2Q92785 391 aa12.37□□□□□ -0.43
PKM-221ENST00000568743 HACL1Q9UJ83 578 aa12.37□□□□□ -0.43
PKM-221ENST00000568743 WDR90Q96KV7 1748 aa12.37□□□□□ -0.43
PKM-221ENST00000568743 MYO3BQ8WXR4 1341 aa12.37□□□□□ -0.43
PKM-221ENST00000568743 IQCA1LA6NCM1 817 aa12.36□□□□□ -0.43
PKM-221ENST00000568743 H7C1D1 291 aa12.36□□□□□ -0.43
PKM-221ENST00000568743 EGFRP00533 1210 aa12.36□□□□□ -0.43
PKM-221ENST00000568743 USP17L8P0C7I0 530 aa12.36□□□□□ -0.43
PKM-221ENST00000568743 VEGFAP15692 232 aaPredicted RBP12.36□□□□□ -0.43
PKM-221ENST00000568743 PRDX5P30044 214 aa12.36□□□□□ -0.43
PKM-221ENST00000568743 EPHX2P34913 555 aa12.36□□□□□ -0.43
PKM-221ENST00000568743 FKBP1AP62942 108 aaKnown RBP12.36□□□□□ -0.43
PKM-221ENST00000568743 SAMD7Q7Z3H4 446 aa12.36□□□□□ -0.43
PKM-221ENST00000568743 TRPM4Q8TD43 1214 aa12.36□□□□□ -0.43
PKM-221ENST00000568743 TBC1D22AQ8WUA7 517 aa12.36□□□□□ -0.43
PKM-221ENST00000568743 ZNF512BQ96KM6 892 aaPredicted RBP12.36□□□□□ -0.43
PKM-221ENST00000568743 DNAJC2Q99543 621 aaKnown RBP12.36□□□□□ -0.43
PKM-221ENST00000568743 BOLA2Q9H3K6 86 aa12.36□□□□□ -0.43
PKM-221ENST00000568743 TAF1DQ9H5J8 278 aaPredicted RBP12.36□□□□□ -0.43
PKM-221ENST00000568743 ECHDC1Q9NTX5 307 aa12.36□□□□□ -0.43
PKM-221ENST00000568743 ABCF2Q9UG63 623 aa12.36□□□□□ -0.43
PKM-221ENST00000568743 TTF2Q9UNY4 1162 aaKnown RBP12.36□□□□□ -0.43
PKM-221ENST00000568743 PDS5AQ29RF7 1337 aaKnown RBP12.36□□□□□ -0.43
PKM-221ENST00000568743 PSME4Q14997 1843 aa12.35□□□□□ -0.43
PKM-221ENST00000568743 CYP2E1P05181 493 aaPredicted RBP12.35□□□□□ -0.43
PKM-221ENST00000568743 ATP5JP18859 108 aa12.35□□□□□ -0.43
PKM-221ENST00000568743 MX1P20591 662 aa12.35□□□□□ -0.43
PKM-221ENST00000568743 TBC1D10BQ4KMP7 808 aaPredicted RBP12.35□□□□□ -0.43
PKM-221ENST00000568743 EAPPQ56P03 285 aaPredicted RBP12.35□□□□□ -0.43
PKM-221ENST00000568743 EDC3Q96F86 508 aaKnown RBP12.35□□□□□ -0.43
PKM-221ENST00000568743 GPATCH3Q96I76 525 aa12.35□□□□□ -0.43
PKM-221ENST00000568743 ANTXR1Q9H6X2 564 aa12.35□□□□□ -0.43
PKM-221ENST00000568743 PIH1D3Q9NQM4 214 aaKnown RBP12.35□□□□□ -0.43
PKM-221ENST00000568743 PPP4R2Q9NY27 417 aa12.35□□□□□ -0.43
PKM-221ENST00000568743 PCDHAC2Q9Y5I4 1007 aa12.35□□□□□ -0.43
PKM-221ENST00000568743 SALL3Q9BXA9 1300 aa12.35□□□□□ -0.43
PKM-221ENST00000568743 KIF3CO14782 793 aa12.34□□□□□ -0.43
PKM-221ENST00000568743 ZBTB22O15209 634 aa12.34□□□□□ -0.43
PKM-221ENST00000568743 LDHBP07195 334 aaKnown RBP12.34□□□□□ -0.43
PKM-221ENST00000568743 POTEIP0CG38 1075 aa12.34□□□□□ -0.43
PKM-221ENST00000568743 POTEJP0CG39 1038 aa12.34□□□□□ -0.43
PKM-221ENST00000568743 PDE4AP27815 886 aa12.34□□□□□ -0.43
PKM-221ENST00000568743 ZNF280AP59817 542 aaPredicted RBP12.34□□□□□ -0.43
PKM-221ENST00000568743 ERICH6BQ5W0A0 696 aa12.34□□□□□ -0.43
PKM-221ENST00000568743 CENPQQ7L2Z9 268 aaPredicted RBP12.34□□□□□ -0.43
PKM-221ENST00000568743 SKAP1Q86WV1 359 aa12.34□□□□□ -0.43
PKM-221ENST00000568743 OGFOD1Q8N543 542 aa12.34□□□□□ -0.43
PKM-221ENST00000568743 ADARB2Q9NS39 739 aaKnown RBP12.34□□□□□ -0.43
PKM-221ENST00000568743 HDAC9Q9UKV0 1011 aa12.34□□□□□ -0.43
PKM-221ENST00000568743 SALL1Q9NSC2 1324 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms