RNA–Protein interactions for RNA: ENST00000567811.1

SMPD3-210, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-210ENST00000567811 KIF16BQ96L93 1317 aa8.98□□□□□ -0.97
SMPD3-210ENST00000567811 ZNF646O15015 1829 aaPredicted RBP8.97□□□□□ -0.97
SMPD3-210ENST00000567811 ADM5C9JUS6 153 aa8.97□□□□□ -0.97
SMPD3-210ENST00000567811 FRAT2O75474 233 aaPredicted RBP8.97□□□□□ -0.97
SMPD3-210ENST00000567811 GRM1Q13255 1194 aa8.97□□□□□ -0.97
SMPD3-210ENST00000567811 DLGAP5Q15398 846 aa8.97□□□□□ -0.97
SMPD3-210ENST00000567811 ZKSCAN2Q63HK3 967 aa8.97□□□□□ -0.97
SMPD3-210ENST00000567811 CERS5Q8N5B7 392 aa8.97□□□□□ -0.97
SMPD3-210ENST00000567811 AIDAQ96BJ3 306 aa8.97□□□□□ -0.97
SMPD3-210ENST00000567811 GBA2Q9HCG7 927 aaPredicted RBP8.97□□□□□ -0.97
SMPD3-210ENST00000567811 CEP126Q9P2H0 1117 aa8.97□□□□□ -0.97
SMPD3-210ENST00000567811 LRRFIP2Q9Y608 721 aaKnown RBP8.97□□□□□ -0.97
SMPD3-210ENST00000567811 FAM205AQ6ZU69 1335 aa8.97□□□□□ -0.97
SMPD3-210ENST00000567811 PITPNM2Q9BZ72 1349 aa8.97□□□□□ -0.97
SMPD3-210ENST00000567811 F8W031 263 aaPredicted RBP8.96□□□□□ -0.98
SMPD3-210ENST00000567811 IFIT1P09914 478 aaKnown RBP8.96□□□□□ -0.98
SMPD3-210ENST00000567811 TRIM27P14373 513 aa8.96□□□□□ -0.98
SMPD3-210ENST00000567811 BCAMP50895 628 aa8.96□□□□□ -0.98
SMPD3-210ENST00000567811 HUNKP57058 714 aa8.96□□□□□ -0.98
SMPD3-210ENST00000567811 COL13A1Q5TAT6 717 aaPredicted RBP8.96□□□□□ -0.98
SMPD3-210ENST00000567811 RGMBQ6NW40 437 aa8.96□□□□□ -0.98
SMPD3-210ENST00000567811 ATG9AQ7Z3C6 839 aa8.96□□□□□ -0.98
SMPD3-210ENST00000567811 VGLL2Q8N8G2 317 aa8.96□□□□□ -0.98
SMPD3-210ENST00000567811 MTMR14Q8NCE2 650 aa8.96□□□□□ -0.98
SMPD3-210ENST00000567811 CCDC102AQ96A19 550 aa8.96□□□□□ -0.98
SMPD3-210ENST00000567811 CLUAP1Q96AJ1 413 aa8.96□□□□□ -0.98
SMPD3-210ENST00000567811 CDCA5Q96FF9 252 aa8.96□□□□□ -0.98
SMPD3-210ENST00000567811 ZBED3Q96IU2 234 aaPredicted RBP8.96□□□□□ -0.98
SMPD3-210ENST00000567811 PRMT6Q96LA8 375 aaPredicted RBP8.96□□□□□ -0.98
SMPD3-210ENST00000567811 MEIS3Q99687 375 aa8.96□□□□□ -0.98
SMPD3-210ENST00000567811 BEGAINQ9BUH8 593 aa8.96□□□□□ -0.98
SMPD3-210ENST00000567811 JAG2Q9Y219 1238 aa8.96□□□□□ -0.98
SMPD3-210ENST00000567811 AKAP11Q9UKA4 1901 aa8.95□□□□□ -0.98
SMPD3-210ENST00000567811 FOXN1O15353 648 aa8.95□□□□□ -0.98
SMPD3-210ENST00000567811 MYO1BO43795 1136 aa8.95□□□□□ -0.98
SMPD3-210ENST00000567811 AOC2O75106 756 aa8.95□□□□□ -0.98
SMPD3-210ENST00000567811 CIAO1O76071 339 aa8.95□□□□□ -0.98
SMPD3-210ENST00000567811 GNAI2P04899 355 aa8.95□□□□□ -0.98
SMPD3-210ENST00000567811 FGFR2P21802 821 aa8.95□□□□□ -0.98
SMPD3-210ENST00000567811 RBM5P52756 815 aaKnown RBP eCLIP8.95□□□□□ -0.98
SMPD3-210ENST00000567811 PUM3Q15397 648 aaKnown RBP8.95□□□□□ -0.98
SMPD3-210ENST00000567811 CFAP100Q494V2 611 aa8.95□□□□□ -0.98
SMPD3-210ENST00000567811 MFSD14BQ5SR56 506 aa8.95□□□□□ -0.98
SMPD3-210ENST00000567811 IFFO2Q5TF58 517 aa8.95□□□□□ -0.98
SMPD3-210ENST00000567811 PRAMEF18Q5VWM3 479 aa8.95□□□□□ -0.98
SMPD3-210ENST00000567811 LPIN2Q92539 896 aa8.95□□□□□ -0.98
SMPD3-210ENST00000567811 MRIQ9BWK5 157 aa8.95□□□□□ -0.98
SMPD3-210ENST00000567811 SIL1Q9H173 461 aa8.95□□□□□ -0.98
SMPD3-210ENST00000567811 COPRSQ9NQ92 184 aa8.95□□□□□ -0.98
SMPD3-210ENST00000567811 SCAF8Q9UPN6 1271 aaKnown RBP8.95□□□□□ -0.98
SMPD3-210ENST00000567811 TNNQ9UQP3 1299 aa8.95□□□□□ -0.98
SMPD3-210ENST00000567811 ECM29Q5VYK3 1845 aa8.94□□□□□ -0.98
SMPD3-210ENST00000567811 AK9Q5TCS8 1911 aa8.94□□□□□ -0.98
SMPD3-210ENST00000567811 SLC5A1P13866 664 aa8.94□□□□□ -0.98
SMPD3-210ENST00000567811 NF2P35240 595 aa8.94□□□□□ -0.98
SMPD3-210ENST00000567811 IL15P40933 162 aaPredicted RBP8.94□□□□□ -0.98
SMPD3-210ENST00000567811 CTCFP49711 727 aaPredicted RBP8.94□□□□□ -0.98
SMPD3-210ENST00000567811 ZNF157P51786 506 aaPredicted RBP8.94□□□□□ -0.98
SMPD3-210ENST00000567811 FKBP1BP68106 108 aa8.94□□□□□ -0.98
SMPD3-210ENST00000567811 APOBEC3FQ8IUX4 373 aaKnown RBP8.94□□□□□ -0.98
SMPD3-210ENST00000567811 TBC1D22AQ8WUA7 517 aa8.94□□□□□ -0.98
SMPD3-210ENST00000567811 TTF2Q9UNY4 1162 aaKnown RBP8.94□□□□□ -0.98
SMPD3-210ENST00000567811 IQSEC3Q9UPP2 1182 aaPredicted RBP8.94□□□□□ -0.98
SMPD3-210ENST00000567811 PA2G4Q9UQ80 394 aaKnown RBP8.94□□□□□ -0.98
SMPD3-210ENST00000567811 ZBED9Q6R2W3 1325 aa8.94□□□□□ -0.98
SMPD3-210ENST00000567811 MYH13Q9UKX3 1938 aa8.93□□□□□ -0.98
SMPD3-210ENST00000567811 CASP8AP2Q9UKL3 1982 aa8.93□□□□□ -0.98
SMPD3-210ENST00000567811 UBE2Q2LH0YL09 131 aa8.93□□□□□ -0.98
SMPD3-210ENST00000567811 SRGAP3O43295 1099 aa8.93□□□□□ -0.98
SMPD3-210ENST00000567811 TIMM10P62072 90 aa8.93□□□□□ -0.98
SMPD3-210ENST00000567811 HDLBPQ00341 1268 aaKnown RBP8.93□□□□□ -0.98
SMPD3-210ENST00000567811 CHAF1AQ13111 956 aaPredicted RBP8.93□□□□□ -0.98
SMPD3-210ENST00000567811 NOGQ13253 232 aa8.93□□□□□ -0.98
SMPD3-210ENST00000567811 TTLL12Q14166 644 aaPredicted RBP8.93□□□□□ -0.98
SMPD3-210ENST00000567811 DZIP1LQ8IYY4 767 aaKnown RBP8.93□□□□□ -0.98
SMPD3-210ENST00000567811 TMEM57Q8N5G2 664 aa8.93□□□□□ -0.98
SMPD3-210ENST00000567811 DEFB129Q9H1M3 183 aa8.93□□□□□ -0.98
SMPD3-210ENST00000567811 PRDM10Q9NQV6 1147 aa8.93□□□□□ -0.98
SMPD3-210ENST00000567811 GNL3LQ9NVN8 582 aaKnown RBP8.93□□□□□ -0.98
SMPD3-210ENST00000567811 SERPINA10Q9UK55 444 aa8.93□□□□□ -0.98
SMPD3-210ENST00000567811 PCDHAC2Q9Y5I4 1007 aa8.93□□□□□ -0.98
SMPD3-210ENST00000567811 SPDYE2BA6NHP3 402 aa8.92□□□□□ -0.98
SMPD3-210ENST00000567811 FAM155AB1AL88 458 aaPredicted RBP8.92□□□□□ -0.98
SMPD3-210ENST00000567811 ZBTB7BO15156 539 aaPredicted RBP8.92□□□□□ -0.98
SMPD3-210ENST00000567811 SPDYE6P0CI01 402 aa8.92□□□□□ -0.98
SMPD3-210ENST00000567811 LBX1P52954 281 aa8.92□□□□□ -0.98
SMPD3-210ENST00000567811 ATP8B2P98198 1209 aa8.92□□□□□ -0.98
SMPD3-210ENST00000567811 KIF23Q02241 960 aaPredicted RBP8.92□□□□□ -0.98
SMPD3-210ENST00000567811 G3BP1Q13283 466 aaKnown RBP eCLIP8.92□□□□□ -0.98
SMPD3-210ENST00000567811 MTX1Q13505 466 aa8.92□□□□□ -0.98
SMPD3-210ENST00000567811 ATP2B3Q16720 1220 aa8.92□□□□□ -0.98
SMPD3-210ENST00000567811 SUPT20HL1Q3ZLR7 823 aa8.92□□□□□ -0.98
SMPD3-210ENST00000567811 MOB2Q70IA6 237 aa8.92□□□□□ -0.98
SMPD3-210ENST00000567811 ARMC9Q7Z3E5 817 aa8.92□□□□□ -0.98
SMPD3-210ENST00000567811 WDR66Q8TBY9 1149 aa8.92□□□□□ -0.98
SMPD3-210ENST00000567811 AKAP2Q9Y2D5 859 aa8.92□□□□□ -0.98
SMPD3-210ENST00000567811 SUGT1Q9Y2Z0 365 aa8.92□□□□□ -0.98
SMPD3-210ENST00000567811 PCNTO95613 3336 aa8.91□□□□□ -0.98
SMPD3-210ENST00000567811 CLRN2A0PK11 232 aa8.91□□□□□ -0.98
SMPD3-210ENST00000567811 PPP1R12BO60237 982 aaPredicted RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms