RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 CNOT7Q9UIV1 285 aaKnown RBP21.26■□□□□ 0.99
COMMD4-220ENST00000567720 AKAP2Q9Y2D5 859 aa21.26■□□□□ 0.99
COMMD4-220ENST00000567720 EGFRP00533 1210 aa21.25■□□□□ 0.99
COMMD4-220ENST00000567720 EAPPQ56P03 285 aaPredicted RBP21.25■□□□□ 0.99
COMMD4-220ENST00000567720 TNNI3KQ59H18 835 aa21.25■□□□□ 0.99
COMMD4-220ENST00000567720 RBM46Q8TBY0 533 aaKnown RBP21.25■□□□□ 0.99
COMMD4-220ENST00000567720 XAGE2Q96GT9 111 aa21.25■□□□□ 0.99
COMMD4-220ENST00000567720 GPR108Q9NPR9 543 aa21.25■□□□□ 0.99
COMMD4-220ENST00000567720 FPGT-TNNI3KV9GXZ4 949 aa21.25■□□□□ 0.99
COMMD4-220ENST00000567720 TRPM7Q96QT4 1865 aa21.24■□□□□ 0.99
COMMD4-220ENST00000567720 EXOC6Q8TAG9 804 aa21.24■□□□□ 0.99
COMMD4-220ENST00000567720 DOCK2Q92608 1830 aa21.24■□□□□ 0.99
COMMD4-220ENST00000567720 ZNF280AP59817 542 aaPredicted RBP21.23■□□□□ 0.99
COMMD4-220ENST00000567720 CHAF1AQ13111 956 aaPredicted RBP21.23■□□□□ 0.99
COMMD4-220ENST00000567720 CCDC102BQ68D86 513 aa21.23■□□□□ 0.99
COMMD4-220ENST00000567720 ERC1Q8IUD2 1116 aa21.23■□□□□ 0.99
COMMD4-220ENST00000567720 FKBP1AP62942 108 aaKnown RBP21.22■□□□□ 0.99
COMMD4-220ENST00000567720 IRX6P78412 446 aaPredicted RBP21.22■□□□□ 0.99
COMMD4-220ENST00000567720 HSP90AB4PQ58FF6 505 aa21.22■□□□□ 0.99
COMMD4-220ENST00000567720 USP50Q70EL3 339 aaPredicted RBP21.22■□□□□ 0.99
COMMD4-220ENST00000567720 SAMD7Q7Z3H4 446 aa21.22■□□□□ 0.99
COMMD4-220ENST00000567720 PNMA8AQ86V59 439 aaPredicted RBP21.22■□□□□ 0.99
COMMD4-220ENST00000567720 LDHDQ86WU2 507 aa21.22■□□□□ 0.99
COMMD4-220ENST00000567720 KIAA0825Q8IV33 1275 aa21.22■□□□□ 0.99
COMMD4-220ENST00000567720 RHPN1Q8TCX5 695 aa21.22■□□□□ 0.99
COMMD4-220ENST00000567720 NEUROD6Q96NK8 337 aa21.22■□□□□ 0.99
COMMD4-220ENST00000567720 TLR7Q9NYK1 1049 aaKnown RBP21.22■□□□□ 0.99
COMMD4-220ENST00000567720 MYH2Q9UKX2 1941 aa21.21■□□□□ 0.99
COMMD4-220ENST00000567720 H7C1D1 291 aa21.21■□□□□ 0.99
COMMD4-220ENST00000567720 APBB1O00213 710 aa21.21■□□□□ 0.99
COMMD4-220ENST00000567720 USP17L8P0C7I0 530 aa21.21■□□□□ 0.99
COMMD4-220ENST00000567720 HIRAP54198 1017 aaPredicted RBP21.21■□□□□ 0.99
COMMD4-220ENST00000567720 TBC1D10BQ4KMP7 808 aaPredicted RBP21.21■□□□□ 0.99
COMMD4-220ENST00000567720 MFSD14BQ5SR56 506 aa21.21■□□□□ 0.99
COMMD4-220ENST00000567720 DBNDD2Q9BQY9 259 aa21.21■□□□□ 0.99
COMMD4-220ENST00000567720 DBNLQ9UJU6 430 aaKnown RBP21.21■□□□□ 0.99
COMMD4-220ENST00000567720 FRAT2O75474 233 aaPredicted RBP21.2■□□□□ 0.98
COMMD4-220ENST00000567720 C1QTNF8P60827 252 aa21.2■□□□□ 0.98
COMMD4-220ENST00000567720 RASGRF1Q13972 1273 aa21.2■□□□□ 0.98
COMMD4-220ENST00000567720 KIF4BQ2VIQ3 1234 aa21.2■□□□□ 0.98
COMMD4-220ENST00000567720 SMC1BQ8NDV3 1235 aa21.2■□□□□ 0.98
COMMD4-220ENST00000567720 EAF2Q96CJ1 260 aaPredicted RBP21.2■□□□□ 0.98
COMMD4-220ENST00000567720 IL1RAPL2Q9NP60 686 aa21.2■□□□□ 0.98
COMMD4-220ENST00000567720 ZBTB22O15209 634 aa21.19■□□□□ 0.98
COMMD4-220ENST00000567720 GRIK5Q16478 980 aa21.19■□□□□ 0.98
COMMD4-220ENST00000567720 CHADLQ6NUI6 762 aa21.19■□□□□ 0.98
COMMD4-220ENST00000567720 KIF1BPQ96EK5 621 aa21.19■□□□□ 0.98
COMMD4-220ENST00000567720 SEMA3EO15041 775 aa21.18■□□□□ 0.98
COMMD4-220ENST00000567720 RAB11FIP3O75154 756 aa21.18■□□□□ 0.98
COMMD4-220ENST00000567720 ARID4AP29374 1257 aaPredicted RBP21.18■□□□□ 0.98
COMMD4-220ENST00000567720 MYOZ2Q9NPC6 264 aa21.18■□□□□ 0.98
COMMD4-220ENST00000567720 GNL3LQ9NVN8 582 aaKnown RBP21.18■□□□□ 0.98
COMMD4-220ENST00000567720 F8W031 263 aaPredicted RBP21.17■□□□□ 0.98
COMMD4-220ENST00000567720 FSTL1Q12841 308 aa21.17■□□□□ 0.98
COMMD4-220ENST00000567720 AAMPQ13685 434 aa21.17■□□□□ 0.98
COMMD4-220ENST00000567720 SCARF1Q14162 830 aa21.17■□□□□ 0.98
COMMD4-220ENST00000567720 AACSQ86V21 672 aa21.17■□□□□ 0.98
COMMD4-220ENST00000567720 TBC1D22AQ8WUA7 517 aa21.17■□□□□ 0.98
COMMD4-220ENST00000567720 CCDC8Q9H0W5 538 aaPredicted RBP21.17■□□□□ 0.98
COMMD4-220ENST00000567720 PDS5AQ29RF7 1337 aaKnown RBP21.17■□□□□ 0.98
COMMD4-220ENST00000567720 MYH7P12883 1935 aa21.16■□□□□ 0.98
COMMD4-220ENST00000567720 ASTN2O75129 1339 aaPredicted RBP21.16■□□□□ 0.98
COMMD4-220ENST00000567720 GORABQ5T7V8 394 aa21.16■□□□□ 0.98
COMMD4-220ENST00000567720 RBM26Q5T8P6 1007 aaKnown RBP21.16■□□□□ 0.98
COMMD4-220ENST00000567720 MAP1SQ66K74 1059 aaPredicted RBP21.16■□□□□ 0.98
COMMD4-220ENST00000567720 PI16Q6UXB8 463 aa21.16■□□□□ 0.98
COMMD4-220ENST00000567720 DCTPP1Q9H773 170 aa21.16■□□□□ 0.98
COMMD4-220ENST00000567720 DENND2AQ9ULE3 1009 aa21.16■□□□□ 0.98
COMMD4-220ENST00000567720 CLEC11AQ9Y240 323 aa21.16■□□□□ 0.98
COMMD4-220ENST00000567720 SALL1Q9NSC2 1324 aa21.15■□□□□ 0.98
COMMD4-220ENST00000567720 MCAMP43121 646 aa21.15■□□□□ 0.98
COMMD4-220ENST00000567720 OGFOD1Q8N543 542 aa21.15■□□□□ 0.98
COMMD4-220ENST00000567720 HDAC9Q9UKV0 1011 aa21.15■□□□□ 0.98
COMMD4-220ENST00000567720 SMARCA5O60264 1052 aaPredicted RBP21.14■□□□□ 0.97
COMMD4-220ENST00000567720 WDR66Q8TBY9 1149 aa21.14■□□□□ 0.97
COMMD4-220ENST00000567720 ZBED3Q96IU2 234 aaPredicted RBP21.14■□□□□ 0.97
COMMD4-220ENST00000567720 LRRCC1Q9C099 1032 aa21.14■□□□□ 0.97
COMMD4-220ENST00000567720 GGA3Q9NZ52 723 aa21.14■□□□□ 0.97
COMMD4-220ENST00000567720 HMG20BQ9P0W2 317 aa21.14■□□□□ 0.97
COMMD4-220ENST00000567720 TTF2Q9UNY4 1162 aaKnown RBP21.14■□□□□ 0.97
COMMD4-220ENST00000567720 PCDHAC2Q9Y5I4 1007 aa21.14■□□□□ 0.97
COMMD4-220ENST00000567720 AOX1Q06278 1338 aa21.13■□□□□ 0.97
COMMD4-220ENST00000567720 PRDX5P30044 214 aa21.13■□□□□ 0.97
COMMD4-220ENST00000567720 HDAC1Q13547 482 aaPredicted RBP21.13■□□□□ 0.97
COMMD4-220ENST00000567720 TTC39AQ5SRH9 613 aa21.13■□□□□ 0.97
COMMD4-220ENST00000567720 CLASRPQ8N2M8 674 aaKnown RBP21.13■□□□□ 0.97
COMMD4-220ENST00000567720 ZC3H15Q8WU90 426 aaKnown RBP21.13■□□□□ 0.97
COMMD4-220ENST00000567720 PGAP2Q9UHJ9 254 aa21.13■□□□□ 0.97
COMMD4-220ENST00000567720 CDK5RAP2Q96SN8 1893 aa21.13■□□□□ 0.97
COMMD4-220ENST00000567720 PASKQ96RG2 1323 aa21.12■□□□□ 0.97
COMMD4-220ENST00000567720 WNT10BO00744 389 aa21.12■□□□□ 0.97
COMMD4-220ENST00000567720 UQCRFS1P1P0C7P4 283 aa21.12■□□□□ 0.97
COMMD4-220ENST00000567720 MMP14P50281 582 aa21.12■□□□□ 0.97
COMMD4-220ENST00000567720 NBPF9Q3BBW0 867 aa21.12■□□□□ 0.97
COMMD4-220ENST00000567720 SPATA5Q8NB90 893 aa21.12■□□□□ 0.97
COMMD4-220ENST00000567720 CEP350Q5VT06 3117 aa21.12■□□□□ 0.97
COMMD4-220ENST00000567720 ITGBL1O95965 494 aaPredicted RBP21.11■□□□□ 0.97
COMMD4-220ENST00000567720 CFAP100Q494V2 611 aa21.11■□□□□ 0.97
COMMD4-220ENST00000567720 CCDC158Q5M9N0 1113 aa21.11■□□□□ 0.97
COMMD4-220ENST00000567720 CNTROBQ8N137 903 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms