RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 ANGEL2Q5VTE6 544 aaKnown RBP8.67□□□□□ -1.02
SF3B3-209ENST00000567635 CYP4F22Q6NT55 531 aa8.67□□□□□ -1.02
SF3B3-209ENST00000567635 KIAA0825Q8IV33 1275 aa8.67□□□□□ -1.02
SF3B3-209ENST00000567635 AIDAQ96BJ3 306 aa8.67□□□□□ -1.02
SF3B3-209ENST00000567635 HDAC9Q9UKV0 1011 aa8.67□□□□□ -1.02
SF3B3-209ENST00000567635 ECM29Q5VYK3 1845 aa8.66□□□□□ -1.02
SF3B3-209ENST00000567635 PITPNM2Q9BZ72 1349 aa8.66□□□□□ -1.02
SF3B3-209ENST00000567635 WNT10BO00744 389 aa8.66□□□□□ -1.02
SF3B3-209ENST00000567635 FOXN1O15353 648 aa8.66□□□□□ -1.02
SF3B3-209ENST00000567635 PDE8BO95263 885 aa8.66□□□□□ -1.02
SF3B3-209ENST00000567635 HIBADHP31937 336 aaKnown RBP8.66□□□□□ -1.02
SF3B3-209ENST00000567635 FKBP1AP62942 108 aaKnown RBP8.66□□□□□ -1.02
SF3B3-209ENST00000567635 HNRNPUQ00839 825 aaKnown RBP eCLIP8.66□□□□□ -1.02
SF3B3-209ENST00000567635 METTL24Q5JXM2 366 aa8.66□□□□□ -1.02
SF3B3-209ENST00000567635 TDRD7Q8NHU6 1098 aaKnown RBP8.66□□□□□ -1.02
SF3B3-209ENST00000567635 CDCA5Q96FF9 252 aa8.66□□□□□ -1.02
SF3B3-209ENST00000567635 FAM84BQ96KN1 310 aaPredicted RBP8.66□□□□□ -1.02
SF3B3-209ENST00000567635 GBA2Q9HCG7 927 aaPredicted RBP8.66□□□□□ -1.02
SF3B3-209ENST00000567635 CASP8AP2Q9UKL3 1982 aa8.66□□□□□ -1.02
SF3B3-209ENST00000567635 FAM205AQ6ZU69 1335 aa8.65□□□□□ -1.02
SF3B3-209ENST00000567635 KIF16BQ96L93 1317 aa8.65□□□□□ -1.02
SF3B3-209ENST00000567635 MYH13Q9UKX3 1938 aa8.65□□□□□ -1.02
SF3B3-209ENST00000567635 GYG1P46976 350 aa8.65□□□□□ -1.02
SF3B3-209ENST00000567635 CTCFP49711 727 aaPredicted RBP8.65□□□□□ -1.02
SF3B3-209ENST00000567635 HUNKP57058 714 aa8.65□□□□□ -1.02
SF3B3-209ENST00000567635 DLGAP5Q15398 846 aa8.65□□□□□ -1.02
SF3B3-209ENST00000567635 INTS3Q68E01 1043 aaKnown RBP8.65□□□□□ -1.02
SF3B3-209ENST00000567635 FBXO33Q7Z6M2 555 aa8.65□□□□□ -1.02
SF3B3-209ENST00000567635 VPS37DQ86XT2 251 aa8.65□□□□□ -1.02
SF3B3-209ENST00000567635 CERS5Q8N5B7 392 aa8.65□□□□□ -1.02
SF3B3-209ENST00000567635 KLHDC4Q8TBB5 520 aa8.65□□□□□ -1.02
SF3B3-209ENST00000567635 BEGAINQ9BUH8 593 aa8.65□□□□□ -1.02
SF3B3-209ENST00000567635 EYA2O00167 538 aa8.64□□□□□ -1.03
SF3B3-209ENST00000567635 AOC2O75106 756 aa8.64□□□□□ -1.03
SF3B3-209ENST00000567635 BCAR3O75815 825 aa8.64□□□□□ -1.03
SF3B3-209ENST00000567635 RFX5P48382 616 aaPredicted RBP8.64□□□□□ -1.03
SF3B3-209ENST00000567635 PTPN12Q05209 780 aaKnown RBP8.64□□□□□ -1.03
SF3B3-209ENST00000567635 CAVIN4Q5BKX8 364 aa8.64□□□□□ -1.03
SF3B3-209ENST00000567635 RGMBQ6NW40 437 aa8.64□□□□□ -1.03
SF3B3-209ENST00000567635 VGLL2Q8N8G2 317 aa8.64□□□□□ -1.03
SF3B3-209ENST00000567635 MTMR14Q8NCE2 650 aa8.64□□□□□ -1.03
SF3B3-209ENST00000567635 FRAT1Q92837 279 aaPredicted RBP8.64□□□□□ -1.03
SF3B3-209ENST00000567635 CCDC102AQ96A19 550 aa8.64□□□□□ -1.03
SF3B3-209ENST00000567635 ZBED3Q96IU2 234 aaPredicted RBP8.64□□□□□ -1.03
SF3B3-209ENST00000567635 PRDM10Q9NQV6 1147 aa8.64□□□□□ -1.03
SF3B3-209ENST00000567635 FBXO3Q9UK99 471 aa8.64□□□□□ -1.03
SF3B3-209ENST00000567635 SCAF8Q9UPN6 1271 aaKnown RBP8.64□□□□□ -1.03
SF3B3-209ENST00000567635 AK9Q5TCS8 1911 aa8.63□□□□□ -1.03
SF3B3-209ENST00000567635 F8W031 263 aaPredicted RBP8.63□□□□□ -1.03
SF3B3-209ENST00000567635 FRAT2O75474 233 aaPredicted RBP8.63□□□□□ -1.03
SF3B3-209ENST00000567635 GNAI3P08754 354 aa8.63□□□□□ -1.03
SF3B3-209ENST00000567635 IFIT1P09914 478 aaKnown RBP8.63□□□□□ -1.03
SF3B3-209ENST00000567635 NF2P35240 595 aa8.63□□□□□ -1.03
SF3B3-209ENST00000567635 ZNF157P51786 506 aaPredicted RBP8.63□□□□□ -1.03
SF3B3-209ENST00000567635 LBX1P52954 281 aa8.63□□□□□ -1.03
SF3B3-209ENST00000567635 FKBP1BP68106 108 aa8.63□□□□□ -1.03
SF3B3-209ENST00000567635 NOGQ13253 232 aa8.63□□□□□ -1.03
SF3B3-209ENST00000567635 PUM3Q15397 648 aaKnown RBP8.63□□□□□ -1.03
SF3B3-209ENST00000567635 CFAP100Q494V2 611 aa8.63□□□□□ -1.03
SF3B3-209ENST00000567635 MFSD14BQ5SR56 506 aa8.63□□□□□ -1.03
SF3B3-209ENST00000567635 PRAMEF18Q5VWM3 479 aa8.63□□□□□ -1.03
SF3B3-209ENST00000567635 ATF7IPQ6VMQ6 1270 aa8.63□□□□□ -1.03
SF3B3-209ENST00000567635 ATG9AQ7Z3C6 839 aa8.63□□□□□ -1.03
SF3B3-209ENST00000567635 APOBEC3FQ8IUX4 373 aaKnown RBP8.63□□□□□ -1.03
SF3B3-209ENST00000567635 TNS4Q8IZW8 715 aa8.63□□□□□ -1.03
SF3B3-209ENST00000567635 CEP126Q9P2H0 1117 aa8.63□□□□□ -1.03
SF3B3-209ENST00000567635 JAG2Q9Y219 1238 aa8.63□□□□□ -1.03
SF3B3-209ENST00000567635 LRRFIP2Q9Y608 721 aaKnown RBP8.63□□□□□ -1.03
SF3B3-209ENST00000567635 FAM155AB1AL88 458 aaPredicted RBP8.62□□□□□ -1.03
SF3B3-209ENST00000567635 MYO1BO43795 1136 aa8.62□□□□□ -1.03
SF3B3-209ENST00000567635 CIAO1O76071 339 aa8.62□□□□□ -1.03
SF3B3-209ENST00000567635 TRIM27P14373 513 aa8.62□□□□□ -1.03
SF3B3-209ENST00000567635 FGFR2P21802 821 aa8.62□□□□□ -1.03
SF3B3-209ENST00000567635 BCAMP50895 628 aa8.62□□□□□ -1.03
SF3B3-209ENST00000567635 RBM5P52756 815 aaKnown RBP eCLIP8.62□□□□□ -1.03
SF3B3-209ENST00000567635 PRMT6Q96LA8 375 aaPredicted RBP8.62□□□□□ -1.03
SF3B3-209ENST00000567635 MEIS3Q99687 375 aa8.62□□□□□ -1.03
SF3B3-209ENST00000567635 IQSEC3Q9UPP2 1182 aaPredicted RBP8.62□□□□□ -1.03
SF3B3-209ENST00000567635 THSD7BQ9C0I4 1608 aa8.62□□□□□ -1.03
SF3B3-209ENST00000567635 PAPPA2Q9BXP8 1791 aa8.61□□□□□ -1.03
SF3B3-209ENST00000567635 SPDYE2BA6NHP3 402 aa8.61□□□□□ -1.03
SF3B3-209ENST00000567635 UBE2Q2LH0YL09 131 aa8.61□□□□□ -1.03
SF3B3-209ENST00000567635 CA12O43570 354 aa8.61□□□□□ -1.03
SF3B3-209ENST00000567635 SPDYE6P0CI01 402 aa8.61□□□□□ -1.03
SF3B3-209ENST00000567635 HSPA8P11142 646 aaKnown RBP8.61□□□□□ -1.03
SF3B3-209ENST00000567635 SLC5A1P13866 664 aa8.61□□□□□ -1.03
SF3B3-209ENST00000567635 DSG3P32926 999 aa8.61□□□□□ -1.03
SF3B3-209ENST00000567635 IL15P40933 162 aaPredicted RBP8.61□□□□□ -1.03
SF3B3-209ENST00000567635 CHAF1AQ13111 956 aaPredicted RBP8.61□□□□□ -1.03
SF3B3-209ENST00000567635 TTLL12Q14166 644 aaPredicted RBP8.61□□□□□ -1.03
SF3B3-209ENST00000567635 ZKSCAN2Q63HK3 967 aa8.61□□□□□ -1.03
SF3B3-209ENST00000567635 MOB2Q70IA6 237 aa8.61□□□□□ -1.03
SF3B3-209ENST00000567635 ARMC9Q7Z3E5 817 aa8.61□□□□□ -1.03
SF3B3-209ENST00000567635 TBC1D22AQ8WUA7 517 aa8.61□□□□□ -1.03
SF3B3-209ENST00000567635 LPIN2Q92539 896 aa8.61□□□□□ -1.03
SF3B3-209ENST00000567635 CLUAP1Q96AJ1 413 aa8.61□□□□□ -1.03
SF3B3-209ENST00000567635 ZIC5Q96T25 663 aa8.61□□□□□ -1.03
SF3B3-209ENST00000567635 MRIQ9BWK5 157 aa8.61□□□□□ -1.03
SF3B3-209ENST00000567635 SIL1Q9H173 461 aa8.61□□□□□ -1.03
SF3B3-209ENST00000567635 DEFB129Q9H1M3 183 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms