RNA–Protein interactions for RNA: ENST00000567400.1

GINS3-207, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-207ENST00000567400 BCAR3O75815 825 aa9.45□□□□□ -0.9
GINS3-207ENST00000567400 HSPA8P11142 646 aaKnown RBP9.45□□□□□ -0.9
GINS3-207ENST00000567400 TRIM27P14373 513 aa9.45□□□□□ -0.9
GINS3-207ENST00000567400 MAP2K1Q02750 393 aaPredicted RBP9.45□□□□□ -0.9
GINS3-207ENST00000567400 PTPN12Q05209 780 aaKnown RBP9.45□□□□□ -0.9
GINS3-207ENST00000567400 ATG9AQ7Z3C6 839 aa9.45□□□□□ -0.9
GINS3-207ENST00000567400 OGFOD1Q8N543 542 aa9.45□□□□□ -0.9
GINS3-207ENST00000567400 MEIS3Q99687 375 aa9.45□□□□□ -0.9
GINS3-207ENST00000567400 FAM205AQ6ZU69 1335 aa9.45□□□□□ -0.9
GINS3-207ENST00000567400 KIF16BQ96L93 1317 aa9.45□□□□□ -0.9
GINS3-207ENST00000567400 COL1A1P02452 1464 aaPredicted RBP9.45□□□□□ -0.9
GINS3-207ENST00000567400 SSC5DA1L4H1 1573 aa9.45□□□□□ -0.9
GINS3-207ENST00000567400 F8W031 263 aaPredicted RBP9.44□□□□□ -0.9
GINS3-207ENST00000567400 PDE8BO95263 885 aa9.44□□□□□ -0.9
GINS3-207ENST00000567400 UBTFL1P0CB47 393 aaPredicted RBP9.44□□□□□ -0.9
GINS3-207ENST00000567400 FGFR2P21802 821 aa9.44□□□□□ -0.9
GINS3-207ENST00000567400 MAP2K2P36507 400 aa9.44□□□□□ -0.9
GINS3-207ENST00000567400 CTCFP49711 727 aaPredicted RBP9.44□□□□□ -0.9
GINS3-207ENST00000567400 LBX1P52954 281 aa9.44□□□□□ -0.9
GINS3-207ENST00000567400 FKBP1AP62942 108 aaKnown RBP9.44□□□□□ -0.9
GINS3-207ENST00000567400 HNRNPUQ00839 825 aaKnown RBP eCLIP9.44□□□□□ -0.9
GINS3-207ENST00000567400 GRIK5Q16478 980 aa9.44□□□□□ -0.9
GINS3-207ENST00000567400 METTL24Q5JXM2 366 aa9.44□□□□□ -0.9
GINS3-207ENST00000567400 INTS3Q68E01 1043 aaKnown RBP9.44□□□□□ -0.9
GINS3-207ENST00000567400 MOB2Q70IA6 237 aa9.44□□□□□ -0.9
GINS3-207ENST00000567400 FBXO33Q7Z6M2 555 aa9.44□□□□□ -0.9
GINS3-207ENST00000567400 MTMR14Q8NCE2 650 aa9.44□□□□□ -0.9
GINS3-207ENST00000567400 ARHGAP45Q92619 1136 aa9.44□□□□□ -0.9
GINS3-207ENST00000567400 AIDAQ96BJ3 306 aa9.44□□□□□ -0.9
GINS3-207ENST00000567400 API5Q9BZZ5 524 aaKnown RBP9.44□□□□□ -0.9
GINS3-207ENST00000567400 LRRFIP2Q9Y608 721 aaKnown RBP9.44□□□□□ -0.9
GINS3-207ENST00000567400 SPDYE2BA6NHP3 402 aa9.43□□□□□ -0.9
GINS3-207ENST00000567400 EYA2O00167 538 aa9.43□□□□□ -0.9
GINS3-207ENST00000567400 SPDYE6P0CI01 402 aa9.43□□□□□ -0.9
GINS3-207ENST00000567400 HIBADHP31937 336 aaKnown RBP9.43□□□□□ -0.9
GINS3-207ENST00000567400 MMP14P50281 582 aa9.43□□□□□ -0.9
GINS3-207ENST00000567400 BCAMP50895 628 aa9.43□□□□□ -0.9
GINS3-207ENST00000567400 MFSD14BQ5SR56 506 aa9.43□□□□□ -0.9
GINS3-207ENST00000567400 RGMBQ6NW40 437 aa9.43□□□□□ -0.9
GINS3-207ENST00000567400 TNS4Q8IZW8 715 aa9.43□□□□□ -0.9
GINS3-207ENST00000567400 C2orf69Q8N8R5 385 aa9.43□□□□□ -0.9
GINS3-207ENST00000567400 PRMT6Q96LA8 375 aaPredicted RBP9.43□□□□□ -0.9
GINS3-207ENST00000567400 PRDM10Q9NQV6 1147 aa9.43□□□□□ -0.9
GINS3-207ENST00000567400 TSKSQ9UJT2 592 aa9.43□□□□□ -0.9
GINS3-207ENST00000567400 HDAC9Q9UKV0 1011 aa9.43□□□□□ -0.9
GINS3-207ENST00000567400 IQSEC3Q9UPP2 1182 aaPredicted RBP9.43□□□□□ -0.9
GINS3-207ENST00000567400 SLC10A3P09131 477 aa9.42□□□□□ -0.9
GINS3-207ENST00000567400 NOGQ13253 232 aa9.42□□□□□ -0.9
GINS3-207ENST00000567400 PUM3Q15397 648 aaKnown RBP9.42□□□□□ -0.9
GINS3-207ENST00000567400 CFAP100Q494V2 611 aa9.42□□□□□ -0.9
GINS3-207ENST00000567400 RASAL3Q86YV0 1011 aa9.42□□□□□ -0.9
GINS3-207ENST00000567400 SIL1Q9H173 461 aa9.42□□□□□ -0.9
GINS3-207ENST00000567400 PA2G4Q9UQ80 394 aaKnown RBP9.42□□□□□ -0.9
GINS3-207ENST00000567400 CLRN2A0PK11 232 aa9.41□□□□□ -0.9
GINS3-207ENST00000567400 CIAO1O76071 339 aa9.41□□□□□ -0.9
GINS3-207ENST00000567400 ZNF157P51786 506 aaPredicted RBP9.41□□□□□ -0.9
GINS3-207ENST00000567400 FKBP1BP68106 108 aa9.41□□□□□ -0.9
GINS3-207ENST00000567400 DLGAP5Q15398 846 aa9.41□□□□□ -0.9
GINS3-207ENST00000567400 ATF7IPQ6VMQ6 1270 aa9.41□□□□□ -0.9
GINS3-207ENST00000567400 APOBEC3FQ8IUX4 373 aaKnown RBP9.41□□□□□ -0.9
GINS3-207ENST00000567400 CLUAP1Q96AJ1 413 aa9.41□□□□□ -0.9
GINS3-207ENST00000567400 DEFB129Q9H1M3 183 aa9.41□□□□□ -0.9
GINS3-207ENST00000567400 FZD1Q9UP38 647 aa9.41□□□□□ -0.9
GINS3-207ENST00000567400 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.41□□□□□ -0.9
GINS3-207ENST00000567400 MYH13Q9UKX3 1938 aa9.41□□□□□ -0.9
GINS3-207ENST00000567400 ZBED9Q6R2W3 1325 aa9.4□□□□□ -0.9
GINS3-207ENST00000567400 UBE2Q2LH0YL09 131 aa9.4□□□□□ -0.9
GINS3-207ENST00000567400 CHAF1AQ13111 956 aaPredicted RBP9.4□□□□□ -0.9
GINS3-207ENST00000567400 MTX1Q13505 466 aa9.4□□□□□ -0.9
GINS3-207ENST00000567400 CDAN1Q8IWY9 1227 aa9.4□□□□□ -0.9
GINS3-207ENST00000567400 LPIN2Q92539 896 aa9.4□□□□□ -0.9
GINS3-207ENST00000567400 FRAT1Q92837 279 aaPredicted RBP9.4□□□□□ -0.9
GINS3-207ENST00000567400 CCDC102AQ96A19 550 aa9.4□□□□□ -0.9
GINS3-207ENST00000567400 COPRSQ9NQ92 184 aa9.4□□□□□ -0.9
GINS3-207ENST00000567400 SERPINA10Q9UK55 444 aa9.4□□□□□ -0.9
GINS3-207ENST00000567400 TTF2Q9UNY4 1162 aaKnown RBP9.4□□□□□ -0.9
GINS3-207ENST00000567400 OTOFQ9HC10 1997 aa9.4□□□□□ -0.9
GINS3-207ENST00000567400 GNAI3P08754 354 aa9.39□□□□□ -0.91
GINS3-207ENST00000567400 IFIT1P09914 478 aaKnown RBP9.39□□□□□ -0.91
GINS3-207ENST00000567400 RLBP1P12271 317 aa9.39□□□□□ -0.91
GINS3-207ENST00000567400 KIF23Q02241 960 aaPredicted RBP9.39□□□□□ -0.91
GINS3-207ENST00000567400 SPDYE2Q495Y8 402 aa9.39□□□□□ -0.91
GINS3-207ENST00000567400 CAVIN4Q5BKX8 364 aa9.39□□□□□ -0.91
GINS3-207ENST00000567400 LDLRAD1Q5T700 205 aa9.39□□□□□ -0.91
GINS3-207ENST00000567400 VPS37DQ86XT2 251 aa9.39□□□□□ -0.91
GINS3-207ENST00000567400 DZIP1LQ8IYY4 767 aaKnown RBP9.39□□□□□ -0.91
GINS3-207ENST00000567400 TMEM57Q8N5G2 664 aa9.39□□□□□ -0.91
GINS3-207ENST00000567400 BEGAINQ9BUH8 593 aa9.39□□□□□ -0.91
GINS3-207ENST00000567400 FBXO3Q9UK99 471 aa9.39□□□□□ -0.91
GINS3-207ENST00000567400 LAMB1P07942 1786 aa9.39□□□□□ -0.91
GINS3-207ENST00000567400 PNMA6EA0A0J9YXQ4 647 aa9.38□□□□□ -0.91
GINS3-207ENST00000567400 IPO8O15397 1037 aaKnown RBP9.38□□□□□ -0.91
GINS3-207ENST00000567400 SRGAP3O43295 1099 aa9.38□□□□□ -0.91
GINS3-207ENST00000567400 CA12O43570 354 aa9.38□□□□□ -0.91
GINS3-207ENST00000567400 SLC5A1P13866 664 aa9.38□□□□□ -0.91
GINS3-207ENST00000567400 ADORA1P30542 326 aa9.38□□□□□ -0.91
GINS3-207ENST00000567400 PHKA1P46020 1223 aa9.38□□□□□ -0.91
GINS3-207ENST00000567400 CRKP46108 304 aa9.38□□□□□ -0.91
GINS3-207ENST00000567400 RBM5P52756 815 aaKnown RBP eCLIP9.38□□□□□ -0.91
GINS3-207ENST00000567400 PRKG1Q13976 671 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms