RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 MICALL2Q8IY33 904 aa15.36■□□□□ 0.05
RNF40-211ENST00000567365 PGAP2Q9UHJ9 254 aa15.36■□□□□ 0.05
RNF40-211ENST00000567365 AKAP2Q9Y2D5 859 aa15.36■□□□□ 0.05
RNF40-211ENST00000567365 SUPT16HQ9Y5B9 1047 aaKnown RBP15.36■□□□□ 0.05
RNF40-211ENST00000567365 MYO3BQ8WXR4 1341 aa15.36■□□□□ 0.05
RNF40-211ENST00000567365 MYH13Q9UKX3 1938 aa15.35■□□□□ 0.05
RNF40-211ENST00000567365 HMMRO75330 724 aa15.35■□□□□ 0.05
RNF40-211ENST00000567365 EGFRP00533 1210 aa15.35■□□□□ 0.05
RNF40-211ENST00000567365 CAVIN4Q5BKX8 364 aa15.35■□□□□ 0.05
RNF40-211ENST00000567365 PNMA8AQ86V59 439 aaPredicted RBP15.35■□□□□ 0.05
RNF40-211ENST00000567365 LDHDQ86WU2 507 aa15.35■□□□□ 0.05
RNF40-211ENST00000567365 SMC1BQ8NDV3 1235 aa15.35■□□□□ 0.05
RNF40-211ENST00000567365 TRPM4Q8TD43 1214 aa15.35■□□□□ 0.05
RNF40-211ENST00000567365 XAGE2Q96GT9 111 aa15.35■□□□□ 0.05
RNF40-211ENST00000567365 EXOC6BQ9Y2D4 811 aa15.35■□□□□ 0.05
RNF40-211ENST00000567365 PHKA1P46020 1223 aa15.34■□□□□ 0.05
RNF40-211ENST00000567365 TNNI3KQ59H18 835 aa15.34■□□□□ 0.05
RNF40-211ENST00000567365 ZBED3Q96IU2 234 aaPredicted RBP15.34■□□□□ 0.05
RNF40-211ENST00000567365 FPGT-TNNI3KV9GXZ4 949 aa15.34■□□□□ 0.05
RNF40-211ENST00000567365 H7C1D1 291 aa15.33■□□□□ 0.04
RNF40-211ENST00000567365 USP17L8P0C7I0 530 aa15.33■□□□□ 0.04
RNF40-211ENST00000567365 MMP14P50281 582 aa15.33■□□□□ 0.04
RNF40-211ENST00000567365 CCDC102BQ68D86 513 aa15.33■□□□□ 0.04
RNF40-211ENST00000567365 SAMD7Q7Z3H4 446 aa15.33■□□□□ 0.04
RNF40-211ENST00000567365 EAF2Q96CJ1 260 aaPredicted RBP15.33■□□□□ 0.04
RNF40-211ENST00000567365 IQSEC3Q9UPP2 1182 aaPredicted RBP15.33■□□□□ 0.04
RNF40-211ENST00000567365 AAMPQ13685 434 aa15.32■□□□□ 0.04
RNF40-211ENST00000567365 GRIK5Q16478 980 aa15.32■□□□□ 0.04
RNF40-211ENST00000567365 HSP90AB4PQ58FF6 505 aa15.32■□□□□ 0.04
RNF40-211ENST00000567365 CHADLQ6NUI6 762 aa15.32■□□□□ 0.04
RNF40-211ENST00000567365 VPS37DQ86XT2 251 aa15.32■□□□□ 0.04
RNF40-211ENST00000567365 ZC3H15Q8WU90 426 aaKnown RBP15.32■□□□□ 0.04
RNF40-211ENST00000567365 DCTPP1Q9H773 170 aa15.32■□□□□ 0.04
RNF40-211ENST00000567365 JAG2Q9Y219 1238 aa15.32■□□□□ 0.04
RNF40-211ENST00000567365 AKAP11Q9UKA4 1901 aa15.32■□□□□ 0.04
RNF40-211ENST00000567365 PDS5AQ29RF7 1337 aaKnown RBP15.32■□□□□ 0.04
RNF40-211ENST00000567365 SEMA3EO15041 775 aa15.31■□□□□ 0.04
RNF40-211ENST00000567365 ITGBL1O95965 494 aaPredicted RBP15.31■□□□□ 0.04
RNF40-211ENST00000567365 OS9Q13438 667 aaPredicted RBP15.31■□□□□ 0.04
RNF40-211ENST00000567365 MFSD14BQ5SR56 506 aa15.31■□□□□ 0.04
RNF40-211ENST00000567365 ERC1Q8IUD2 1116 aa15.31■□□□□ 0.04
RNF40-211ENST00000567365 KIAA0825Q8IV33 1275 aa15.31■□□□□ 0.04
RNF40-211ENST00000567365 RHPN1Q8TCX5 695 aa15.31■□□□□ 0.04
RNF40-211ENST00000567365 DBNDD2Q9BQY9 259 aa15.31■□□□□ 0.04
RNF40-211ENST00000567365 DBNLQ9UJU6 430 aaKnown RBP15.31■□□□□ 0.04
RNF40-211ENST00000567365 RAB11FIP3O75154 756 aa15.3■□□□□ 0.04
RNF40-211ENST00000567365 CAPN15O75808 1086 aa15.3■□□□□ 0.04
RNF40-211ENST00000567365 ARID4AP29374 1257 aaPredicted RBP15.3■□□□□ 0.04
RNF40-211ENST00000567365 RASGRF1Q13972 1273 aa15.3■□□□□ 0.04
RNF40-211ENST00000567365 TBC1D10BQ4KMP7 808 aaPredicted RBP15.3■□□□□ 0.04
RNF40-211ENST00000567365 EAPPQ56P03 285 aaPredicted RBP15.3■□□□□ 0.04
RNF40-211ENST00000567365 MTMR14Q8NCE2 650 aa15.3■□□□□ 0.04
RNF40-211ENST00000567365 EXOC6Q8TAG9 804 aa15.3■□□□□ 0.04
RNF40-211ENST00000567365 KIF1BPQ96EK5 621 aa15.3■□□□□ 0.04
RNF40-211ENST00000567365 ZNF512BQ96KM6 892 aaPredicted RBP15.3■□□□□ 0.04
RNF40-211ENST00000567365 PASKQ96RG2 1323 aa15.3■□□□□ 0.04
RNF40-211ENST00000567365 MYOZ2Q9NPC6 264 aa15.3■□□□□ 0.04
RNF40-211ENST00000567365 SALL1Q9NSC2 1324 aa15.3■□□□□ 0.04
RNF40-211ENST00000567365 TLR7Q9NYK1 1049 aaKnown RBP15.3■□□□□ 0.04
RNF40-211ENST00000567365 POLR2AP24928 1970 aaKnown RBP15.29■□□□□ 0.04
RNF40-211ENST00000567365 KIF4BQ2VIQ3 1234 aa15.29■□□□□ 0.04
RNF40-211ENST00000567365 TBC1D22AQ8WUA7 517 aa15.29■□□□□ 0.04
RNF40-211ENST00000567365 FBXW7Q969H0 707 aa15.29■□□□□ 0.04
RNF40-211ENST00000567365 NEUROD6Q96NK8 337 aa15.29■□□□□ 0.04
RNF40-211ENST00000567365 DENND2AQ9ULE3 1009 aa15.29■□□□□ 0.04
RNF40-211ENST00000567365 SUGT1Q9Y2Z0 365 aa15.29■□□□□ 0.04
RNF40-211ENST00000567365 ASTN2O75129 1339 aaPredicted RBP15.28■□□□□ 0.04
RNF40-211ENST00000567365 CHAF1AQ13111 956 aaPredicted RBP15.28■□□□□ 0.04
RNF40-211ENST00000567365 SCARF1Q14162 830 aa15.28■□□□□ 0.04
RNF40-211ENST00000567365 MAP1SQ66K74 1059 aaPredicted RBP15.28■□□□□ 0.04
RNF40-211ENST00000567365 WDR66Q8TBY9 1149 aa15.28■□□□□ 0.04
RNF40-211ENST00000567365 GNL3LQ9NVN8 582 aaKnown RBP15.28■□□□□ 0.04
RNF40-211ENST00000567365 ECM29Q5VYK3 1845 aa15.28■□□□□ 0.04
RNF40-211ENST00000567365 WNT10BO00744 389 aa15.27■□□□□ 0.04
RNF40-211ENST00000567365 MCAMP43121 646 aa15.27■□□□□ 0.04
RNF40-211ENST00000567365 HDAC1Q13547 482 aaPredicted RBP15.27■□□□□ 0.04
RNF40-211ENST00000567365 NBPF9Q3BBW0 867 aa15.27■□□□□ 0.04
RNF40-211ENST00000567365 CNTROBQ8N137 903 aa15.27■□□□□ 0.04
RNF40-211ENST00000567365 OGFOD1Q8N543 542 aa15.27■□□□□ 0.04
RNF40-211ENST00000567365 MRIQ9BWK5 157 aa15.27■□□□□ 0.04
RNF40-211ENST00000567365 CCDC8Q9H0W5 538 aaPredicted RBP15.27■□□□□ 0.04
RNF40-211ENST00000567365 IL1RAPL2Q9NP60 686 aa15.27■□□□□ 0.04
RNF40-211ENST00000567365 HMG20BQ9P0W2 317 aa15.27■□□□□ 0.04
RNF40-211ENST00000567365 PCDHAC2Q9Y5I4 1007 aa15.27■□□□□ 0.04
RNF40-211ENST00000567365 AOX1Q06278 1338 aa15.26■□□□□ 0.03
RNF40-211ENST00000567365 FRAT2O75474 233 aaPredicted RBP15.26■□□□□ 0.03
RNF40-211ENST00000567365 HSPA1AP0DMV8 641 aaKnown RBP15.26■□□□□ 0.03
RNF40-211ENST00000567365 HSPA1BP0DMV9 641 aaKnown RBP15.26■□□□□ 0.03
RNF40-211ENST00000567365 HDLBPQ00341 1268 aaKnown RBP15.26■□□□□ 0.03
RNF40-211ENST00000567365 RBM26Q5T8P6 1007 aaKnown RBP15.26■□□□□ 0.03
RNF40-211ENST00000567365 TNS4Q8IZW8 715 aa15.26■□□□□ 0.03
RNF40-211ENST00000567365 HDAC9Q9UKV0 1011 aa15.26■□□□□ 0.03
RNF40-211ENST00000567365 TTF2Q9UNY4 1162 aaKnown RBP15.26■□□□□ 0.03
RNF40-211ENST00000567365 CLEC11AQ9Y240 323 aa15.26■□□□□ 0.03
RNF40-211ENST00000567365 PITPNM2Q9BZ72 1349 aa15.25■□□□□ 0.03
RNF40-211ENST00000567365 SPDYE2BA6NHP3 402 aa15.25■□□□□ 0.03
RNF40-211ENST00000567365 UQCRFS1P1P0C7P4 283 aa15.25■□□□□ 0.03
RNF40-211ENST00000567365 SPDYE6P0CI01 402 aa15.25■□□□□ 0.03
RNF40-211ENST00000567365 PRDX5P30044 214 aa15.25■□□□□ 0.03
RNF40-211ENST00000567365 PI16Q6UXB8 463 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms