RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 UBE4AQ14139 1066 aa18.95■□□□□ 0.62
RNF40-209ENST00000566703 ZNF594Q96JF6 807 aaPredicted RBP18.95■□□□□ 0.62
RNF40-209ENST00000566703 PPP2R3BQ9Y5P8 575 aa18.95■□□□□ 0.62
RNF40-209ENST00000566703 CASP8AP2Q9UKL3 1982 aa18.95■□□□□ 0.62
RNF40-209ENST00000566703 UTYO14607 1347 aa18.95■□□□□ 0.62
RNF40-209ENST00000566703 PLIN1O60240 522 aa18.94■□□□□ 0.62
RNF40-209ENST00000566703 LDLRAD1Q5T700 205 aa18.94■□□□□ 0.62
RNF40-209ENST00000566703 DEFB129Q9H1M3 183 aa18.94■□□□□ 0.62
RNF40-209ENST00000566703 ZNF646O15015 1829 aaPredicted RBP18.93■□□□□ 0.62
RNF40-209ENST00000566703 COL1A1P02452 1464 aaPredicted RBP18.93■□□□□ 0.62
RNF40-209ENST00000566703 MYO1BO43795 1136 aa18.93■□□□□ 0.62
RNF40-209ENST00000566703 NOM1Q5C9Z4 860 aaKnown RBP18.93■□□□□ 0.62
RNF40-209ENST00000566703 TDRD7Q8NHU6 1098 aaKnown RBP18.93■□□□□ 0.62
RNF40-209ENST00000566703 FAM205AQ6ZU69 1335 aa18.93■□□□□ 0.62
RNF40-209ENST00000566703 UNCXA6NJT0 531 aa18.92■□□□□ 0.62
RNF40-209ENST00000566703 MLLT1Q03111 559 aaPredicted RBP18.92■□□□□ 0.62
RNF40-209ENST00000566703 PTPN12Q05209 780 aaKnown RBP18.92■□□□□ 0.62
RNF40-209ENST00000566703 MAP3K11Q16584 847 aa18.92■□□□□ 0.62
RNF40-209ENST00000566703 KAZALD1Q96I82 304 aa18.92■□□□□ 0.62
RNF40-209ENST00000566703 SUCLG2Q96I99 432 aa18.92■□□□□ 0.62
RNF40-209ENST00000566703 RIPOR2Q9Y4F9 1068 aa18.92■□□□□ 0.62
RNF40-209ENST00000566703 E9PSI1 815 aa18.91■□□□□ 0.62
RNF40-209ENST00000566703 PPP1R12BO60237 982 aaPredicted RBP18.91■□□□□ 0.62
RNF40-209ENST00000566703 NBPF7P0C2Y1 421 aaPredicted RBP18.91■□□□□ 0.62
RNF40-209ENST00000566703 HIBADHP31937 336 aaKnown RBP18.91■□□□□ 0.62
RNF40-209ENST00000566703 SREBF2Q12772 1141 aa18.91■□□□□ 0.62
RNF40-209ENST00000566703 CFAP100Q494V2 611 aa18.91■□□□□ 0.62
RNF40-209ENST00000566703 MRPL50Q8N5N7 158 aaKnown RBP18.91■□□□□ 0.62
RNF40-209ENST00000566703 PTPRCP08575 1304 aa18.91■□□□□ 0.62
RNF40-209ENST00000566703 SPDYE2BA6NHP3 402 aa18.9■□□□□ 0.62
RNF40-209ENST00000566703 SPDYE6P0CI01 402 aa18.9■□□□□ 0.62
RNF40-209ENST00000566703 INHBEP58166 350 aa18.9■□□□□ 0.62
RNF40-209ENST00000566703 RABL6Q3YEC7 729 aaPredicted RBP18.9■□□□□ 0.62
RNF40-209ENST00000566703 SUPT20HL1Q3ZLR7 823 aa18.9■□□□□ 0.62
RNF40-209ENST00000566703 CTU1Q7Z7A3 348 aaKnown RBP18.9■□□□□ 0.62
RNF40-209ENST00000566703 FAM84BQ96KN1 310 aaPredicted RBP18.9■□□□□ 0.62
RNF40-209ENST00000566703 PRMT6Q96LA8 375 aaPredicted RBP18.9■□□□□ 0.62
RNF40-209ENST00000566703 ANGEL1Q9UNK9 670 aaKnown RBP18.9■□□□□ 0.62
RNF40-209ENST00000566703 MROH5Q6ZUA9 1318 aa18.9■□□□□ 0.62
RNF40-209ENST00000566703 AKAP11Q9UKA4 1901 aa18.9■□□□□ 0.62
RNF40-209ENST00000566703 F8W031 263 aaPredicted RBP18.89■□□□□ 0.61
RNF40-209ENST00000566703 PKN2Q16513 984 aaKnown RBP18.89■□□□□ 0.61
RNF40-209ENST00000566703 CFHR5Q9BXR6 569 aa18.89■□□□□ 0.61
RNF40-209ENST00000566703 PRKG1Q13976 671 aa18.88■□□□□ 0.61
RNF40-209ENST00000566703 SPRYD7Q5W111 196 aa18.88■□□□□ 0.61
RNF40-209ENST00000566703 SLC10A4Q96EP9 437 aa18.88■□□□□ 0.61
RNF40-209ENST00000566703 PUS3Q9BZE2 481 aaKnown RBP18.88■□□□□ 0.61
RNF40-209ENST00000566703 SERPINA10Q9UK55 444 aa18.88■□□□□ 0.61
RNF40-209ENST00000566703 TBC1D8O95759 1140 aa18.87■□□□□ 0.61
RNF40-209ENST00000566703 ALDH1A1P00352 501 aa18.87■□□□□ 0.61
RNF40-209ENST00000566703 GYG1P46976 350 aa18.87■□□□□ 0.61
RNF40-209ENST00000566703 MFSD14BQ5SR56 506 aa18.87■□□□□ 0.61
RNF40-209ENST00000566703 FBXO33Q7Z6M2 555 aa18.87■□□□□ 0.61
RNF40-209ENST00000566703 BICC1Q9H694 974 aaKnown RBP18.87■□□□□ 0.61
RNF40-209ENST00000566703 PCDHAC2Q9Y5I4 1007 aa18.87■□□□□ 0.61
RNF40-209ENST00000566703 CLRN2A0PK11 232 aa18.86■□□□□ 0.61
RNF40-209ENST00000566703 RBM5P52756 815 aaKnown RBP eCLIP18.86■□□□□ 0.61
RNF40-209ENST00000566703 SLFN5Q08AF3 891 aa18.86■□□□□ 0.61
RNF40-209ENST00000566703 TNFAIP1Q13829 316 aa18.86■□□□□ 0.61
RNF40-209ENST00000566703 MANSC4A6NHS7 340 aaPredicted RBP18.85■□□□□ 0.61
RNF40-209ENST00000566703 GPR25O00155 361 aa18.85■□□□□ 0.61
RNF40-209ENST00000566703 ZBTB48P10074 688 aaPredicted RBP18.85■□□□□ 0.61
RNF40-209ENST00000566703 ALDH1L2Q3SY69 923 aa18.85■□□□□ 0.61
RNF40-209ENST00000566703 ZNF296Q8WUU4 475 aaPredicted RBP18.85■□□□□ 0.61
RNF40-209ENST00000566703 SSH1Q8WYL5 1049 aa18.85■□□□□ 0.61
RNF40-209ENST00000566703 VEZTQ9HBM0 779 aa18.85■□□□□ 0.61
RNF40-209ENST00000566703 TTF2Q9UNY4 1162 aaKnown RBP18.85■□□□□ 0.61
RNF40-209ENST00000566703 JAG2Q9Y219 1238 aa18.85■□□□□ 0.61
RNF40-209ENST00000566703 PDE8BO95263 885 aa18.84■□□□□ 0.61
RNF40-209ENST00000566703 IREB2P48200 963 aaKnown RBP18.84■□□□□ 0.61
RNF40-209ENST00000566703 HDLBPQ00341 1268 aaKnown RBP18.84■□□□□ 0.61
RNF40-209ENST00000566703 MKRN3Q13064 507 aaKnown RBP18.84■□□□□ 0.61
RNF40-209ENST00000566703 RASA3Q14644 834 aa18.84■□□□□ 0.61
RNF40-209ENST00000566703 SPDYE2Q495Y8 402 aa18.84■□□□□ 0.61
RNF40-209ENST00000566703 CAVIN4Q5BKX8 364 aa18.84■□□□□ 0.61
RNF40-209ENST00000566703 METTL24Q5JXM2 366 aa18.84■□□□□ 0.61
RNF40-209ENST00000566703 NBPF12Q5TAG4 269 aaPredicted RBP18.84■□□□□ 0.61
RNF40-209ENST00000566703 VPS37DQ86XT2 251 aa18.84■□□□□ 0.61
RNF40-209ENST00000566703 ANKRD44Q8N8A2 993 aa18.84■□□□□ 0.61
RNF40-209ENST00000566703 TBC1D22AQ8WUA7 517 aa18.84■□□□□ 0.61
RNF40-209ENST00000566703 USP44Q9H0E7 712 aa18.84■□□□□ 0.61
RNF40-209ENST00000566703 USP2O75604 605 aaPredicted RBP18.83■□□□□ 0.6
RNF40-209ENST00000566703 LRRC24Q50LG9 513 aa18.83■□□□□ 0.6
RNF40-209ENST00000566703 MRIQ9BWK5 157 aa18.83■□□□□ 0.6
RNF40-209ENST00000566703 ZNF70Q9UC06 446 aaPredicted RBP18.83■□□□□ 0.6
RNF40-209ENST00000566703 A0A1B0GUL6 1792 aa18.83■□□□□ 0.6
RNF40-209ENST00000566703 DZIP1LQ8IYY4 767 aaKnown RBP18.82■□□□□ 0.6
RNF40-209ENST00000566703 ANKRD13AQ8IZ07 590 aa18.82■□□□□ 0.6
RNF40-209ENST00000566703 VGLL2Q8N8G2 317 aa18.82■□□□□ 0.6
RNF40-209ENST00000566703 WNK4Q96J92 1243 aa18.82■□□□□ 0.6
RNF40-209ENST00000566703 AOX1Q06278 1338 aa18.81■□□□□ 0.6
RNF40-209ENST00000566703 KIF16BQ96L93 1317 aa18.81■□□□□ 0.6
RNF40-209ENST00000566703 FKTNO75072 461 aa18.81■□□□□ 0.6
RNF40-209ENST00000566703 CRKP46108 304 aa18.81■□□□□ 0.6
RNF40-209ENST00000566703 TDRD3Q9H7E2 651 aaKnown RBP18.81■□□□□ 0.6
RNF40-209ENST00000566703 FZD1Q9UP38 647 aa18.81■□□□□ 0.6
RNF40-209ENST00000566703 SUGT1Q9Y2Z0 365 aa18.81■□□□□ 0.6
RNF40-209ENST00000566703 FRAT2O75474 233 aaPredicted RBP18.8■□□□□ 0.6
RNF40-209ENST00000566703 CT47B1P0C2W7 299 aaPredicted RBP18.8■□□□□ 0.6
RNF40-209ENST00000566703 TNNI2P48788 182 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms