RNA–Protein interactions for RNA: ENST00000566582.1

LINC01541-201, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 2

Gene LINC01541, Length 2,414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-201ENST00000566582 KRT85P78386 507 aa10.34□□□□□ -0.75
LINC01541-201ENST00000566582 SCRN1Q12765 414 aa10.34□□□□□ -0.75
LINC01541-201ENST00000566582 FAM182BQ5T319 152 aa10.34□□□□□ -0.75
LINC01541-201ENST00000566582 TMEM87AQ8NBN3 555 aa10.34□□□□□ -0.75
LINC01541-201ENST00000566582 CDC5LQ99459 802 aaKnown RBP10.34□□□□□ -0.75
LINC01541-201ENST00000566582 ZNF532Q9HCE3 1301 aa10.34□□□□□ -0.75
LINC01541-201ENST00000566582 EXOSC10Q01780 885 aaKnown RBP10.33□□□□□ -0.76
LINC01541-201ENST00000566582 MEX3CQ5U5Q3 659 aaKnown RBP10.33□□□□□ -0.76
LINC01541-201ENST00000566582 SMIM5Q71RC9 77 aa10.33□□□□□ -0.76
LINC01541-201ENST00000566582 AIDAQ96BJ3 306 aa10.33□□□□□ -0.76
LINC01541-201ENST00000566582 PFKFB2O60825 505 aa10.33□□□□□ -0.76
LINC01541-201ENST00000566582 PDE6AP16499 860 aa10.33□□□□□ -0.76
LINC01541-201ENST00000566582 CHRNDQ07001 517 aa10.33□□□□□ -0.76
LINC01541-201ENST00000566582 MAP3K12Q12852 859 aa10.33□□□□□ -0.76
LINC01541-201ENST00000566582 TRDNQ13061 729 aa10.33□□□□□ -0.76
LINC01541-201ENST00000566582 ERFEQ4G0M1 354 aa10.33□□□□□ -0.76
LINC01541-201ENST00000566582 FAM173BQ6P4H8 233 aa10.33□□□□□ -0.76
LINC01541-201ENST00000566582 PTF1AQ7RTS3 328 aa10.33□□□□□ -0.76
LINC01541-201ENST00000566582 NCOA7Q8NI08 942 aa10.33□□□□□ -0.76
LINC01541-201ENST00000566582 KIF3AQ9Y496 699 aa10.33□□□□□ -0.76
LINC01541-201ENST00000566582 FOXP2O15409 715 aa10.32□□□□□ -0.76
LINC01541-201ENST00000566582 MCM5P33992 734 aa10.32□□□□□ -0.76
LINC01541-201ENST00000566582 BCAMP50895 628 aa10.32□□□□□ -0.76
LINC01541-201ENST00000566582 FOSBP53539 338 aa10.32□□□□□ -0.76
LINC01541-201ENST00000566582 RASGRF1Q13972 1273 aa10.32□□□□□ -0.76
LINC01541-201ENST00000566582 UBE3CQ15386 1083 aa10.32□□□□□ -0.76
LINC01541-201ENST00000566582 ANKRD18AQ8IVF6 992 aa10.32□□□□□ -0.76
LINC01541-201ENST00000566582 RBSNQ9H1K0 784 aa10.32□□□□□ -0.76
LINC01541-201ENST00000566582 NCOA5Q9HCD5 579 aaKnown RBP10.32□□□□□ -0.76
LINC01541-201ENST00000566582 WWC3Q9ULE0 1092 aa10.32□□□□□ -0.76
LINC01541-201ENST00000566582 GOLGA6L4A6NEF3 574 aa10.32□□□□□ -0.76
LINC01541-201ENST00000566582 GNPATO15228 680 aa10.32□□□□□ -0.76
LINC01541-201ENST00000566582 NPHP1O15259 732 aa10.32□□□□□ -0.76
LINC01541-201ENST00000566582 PPFIA3O75145 1194 aa10.32□□□□□ -0.76
LINC01541-201ENST00000566582 ZPR1O75312 459 aa10.32□□□□□ -0.76
LINC01541-201ENST00000566582 FNBP4Q8N3X1 1017 aaPredicted RBP10.32□□□□□ -0.76
LINC01541-201ENST00000566582 MAGEB6Q8N7X4 407 aa10.32□□□□□ -0.76
LINC01541-201ENST00000566582 LLPHQ9BRT6 129 aaKnown RBP10.32□□□□□ -0.76
LINC01541-201ENST00000566582 LAMA4Q16363 1823 aa10.31□□□□□ -0.76
LINC01541-201ENST00000566582 MYH7P12883 1935 aa10.31□□□□□ -0.76
LINC01541-201ENST00000566582 AKAP11Q9UKA4 1901 aa10.31□□□□□ -0.76
LINC01541-201ENST00000566582 PRC1O43663 620 aa10.31□□□□□ -0.76
LINC01541-201ENST00000566582 HMGN5P82970 282 aaKnown RBP10.31□□□□□ -0.76
LINC01541-201ENST00000566582 CHMP4CQ96CF2 233 aa10.31□□□□□ -0.76
LINC01541-201ENST00000566582 ZNF274Q96GC6 653 aaPredicted RBP10.31□□□□□ -0.76
LINC01541-201ENST00000566582 AGXT2Q9BYV1 514 aa10.31□□□□□ -0.76
LINC01541-201ENST00000566582 TSPY26PQ9H489 355 aa10.31□□□□□ -0.76
LINC01541-201ENST00000566582 LRP2BPQ9P2M1 347 aa10.31□□□□□ -0.76
LINC01541-201ENST00000566582 TFIP11Q9UBB9 837 aaKnown RBP10.31□□□□□ -0.76
LINC01541-201ENST00000566582 CCNL1Q9UK58 526 aaPredicted RBP10.31□□□□□ -0.76
LINC01541-201ENST00000566582 RREB1Q92766 1687 aa10.31□□□□□ -0.76
LINC01541-201ENST00000566582 CNTNAP4Q9C0A0 1308 aa10.31□□□□□ -0.76
LINC01541-201ENST00000566582 PTPDC1A2A3K4 754 aa10.31□□□□□ -0.76
LINC01541-201ENST00000566582 PDIA3P30101 505 aaKnown RBP10.31□□□□□ -0.76
LINC01541-201ENST00000566582 CCDC173Q0VFZ6 552 aa10.31□□□□□ -0.76
LINC01541-201ENST00000566582 CCDC183Q5T5S1 534 aa10.31□□□□□ -0.76
LINC01541-201ENST00000566582 TBC1D9BQ66K14 1250 aa10.31□□□□□ -0.76
LINC01541-201ENST00000566582 FAM43AQ8N2R8 423 aa10.31□□□□□ -0.76
LINC01541-201ENST00000566582 RNF214Q8ND24 703 aa10.31□□□□□ -0.76
LINC01541-201ENST00000566582 NSUN7Q8NE18 718 aaKnown RBP10.31□□□□□ -0.76
LINC01541-201ENST00000566582 SETDB2Q96T68 719 aa10.31□□□□□ -0.76
LINC01541-201ENST00000566582 IQSEC3Q9UPP2 1182 aaPredicted RBP10.31□□□□□ -0.76
LINC01541-201ENST00000566582 DDX60Q8IY21 1712 aaKnown RBP10.3□□□□□ -0.76
LINC01541-201ENST00000566582 RTL9Q8NET4 1388 aa10.3□□□□□ -0.76
LINC01541-201ENST00000566582 LRP5O75197 1615 aa10.3□□□□□ -0.76
LINC01541-201ENST00000566582 NBPF5PQ86XG9 351 aaPredicted RBP10.3□□□□□ -0.76
LINC01541-201ENST00000566582 VPS37DQ86XT2 251 aa10.3□□□□□ -0.76
LINC01541-201ENST00000566582 SPATA32Q96LK8 384 aa10.3□□□□□ -0.76
LINC01541-201ENST00000566582 SCAND2PQ9GZW5 306 aaPredicted RBP10.3□□□□□ -0.76
LINC01541-201ENST00000566582 GPHNQ9NQX3 736 aaPredicted RBP10.3□□□□□ -0.76
LINC01541-201ENST00000566582 CICQ96RK0 1608 aaPredicted RBP10.3□□□□□ -0.76
LINC01541-201ENST00000566582 SPATA31A6Q5VVP1 1343 aa10.3□□□□□ -0.76
LINC01541-201ENST00000566582 KLF18A0A0U1RQI7 1052 aa10.29□□□□□ -0.76
LINC01541-201ENST00000566582 RPS6KA4O75676 772 aa10.29□□□□□ -0.76
LINC01541-201ENST00000566582 LETM1O95202 739 aaPredicted RBP10.29□□□□□ -0.76
LINC01541-201ENST00000566582 SMARCC2Q8TAQ2 1214 aa10.29□□□□□ -0.76
LINC01541-201ENST00000566582 SRP68Q9UHB9 627 aaKnown RBP10.29□□□□□ -0.76
LINC01541-201ENST00000566582 RTCBQ9Y3I0 505 aaKnown RBP10.29□□□□□ -0.76
LINC01541-201ENST00000566582 COL5A3P25940 1745 aaPredicted RBP10.29□□□□□ -0.76
LINC01541-201ENST00000566582 DHX16O60231 1041 aaKnown RBP10.29□□□□□ -0.76
LINC01541-201ENST00000566582 MBD4O95243 580 aa10.29□□□□□ -0.76
LINC01541-201ENST00000566582 CAVIN4Q5BKX8 364 aa10.29□□□□□ -0.76
LINC01541-201ENST00000566582 C3orf67Q6ZVT6 689 aa10.29□□□□□ -0.76
LINC01541-201ENST00000566582 TTC6Q86TZ1 520 aa10.29□□□□□ -0.76
LINC01541-201ENST00000566582 NYXQ9GZU5 481 aa10.29□□□□□ -0.76
LINC01541-201ENST00000566582 NAPBQ9H115 298 aa10.29□□□□□ -0.76
LINC01541-201ENST00000566582 ZSCAN16Q9H4T2 348 aaPredicted RBP10.29□□□□□ -0.76
LINC01541-201ENST00000566582 GNL3LQ9NVN8 582 aaKnown RBP10.29□□□□□ -0.76
LINC01541-201ENST00000566582 ABCF2Q9UG63 623 aa10.29□□□□□ -0.76
LINC01541-201ENST00000566582 NARFQ9UHQ1 456 aa10.29□□□□□ -0.76
LINC01541-201ENST00000566582 TCRBV5S4A2TA0A5A2 114 aa10.28□□□□□ -0.76
LINC01541-201ENST00000566582 GOLGA8BA8MQT2 603 aa10.28□□□□□ -0.76
LINC01541-201ENST00000566582 CPLX1O14810 134 aa10.28□□□□□ -0.76
LINC01541-201ENST00000566582 CTDNEP1O95476 244 aa10.28□□□□□ -0.76
LINC01541-201ENST00000566582 MB21D2Q8IYB1 491 aaPredicted RBP10.28□□□□□ -0.76
LINC01541-201ENST00000566582 NLRP3Q96P20 1036 aa10.28□□□□□ -0.76
LINC01541-201ENST00000566582 STRBPQ96SI9 672 aaKnown RBP10.28□□□□□ -0.76
LINC01541-201ENST00000566582 ARMT1Q9H993 441 aa10.28□□□□□ -0.76
LINC01541-201ENST00000566582 ATRNO75882 1429 aa10.28□□□□□ -0.76
LINC01541-201ENST00000566582 MYO5AQ9Y4I1 1855 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms