RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 FBXO33Q7Z6M2 555 aa24.05■■□□□ 1.44
CCDC113-204ENST00000566498 FBXO3Q9UK99 471 aa24.05■■□□□ 1.44
CCDC113-204ENST00000566498 PA2G4Q9UQ80 394 aaKnown RBP24.05■■□□□ 1.44
CCDC113-204ENST00000566498 TRPM7Q96QT4 1865 aa24.04■■□□□ 1.44
CCDC113-204ENST00000566498 CNTNAP1P78357 1384 aa24.04■■□□□ 1.44
CCDC113-204ENST00000566498 ADM5C9JUS6 153 aa24.04■■□□□ 1.44
CCDC113-204ENST00000566498 CIAO1O76071 339 aa24.04■■□□□ 1.44
CCDC113-204ENST00000566498 PAXIP1Q6ZW49 1069 aaPredicted RBP24.04■■□□□ 1.44
CCDC113-204ENST00000566498 IQSEC3Q9UPP2 1182 aaPredicted RBP24.04■■□□□ 1.44
CCDC113-204ENST00000566498 SLC5A1P13866 664 aa24.03■■□□□ 1.44
CCDC113-204ENST00000566498 VEGFBP49765 207 aa24.03■■□□□ 1.44
CCDC113-204ENST00000566498 BCAMP50895 628 aa24.03■■□□□ 1.44
CCDC113-204ENST00000566498 ITPRIPQ8IWB1 547 aa24.03■■□□□ 1.44
CCDC113-204ENST00000566498 CERS5Q8N5B7 392 aa24.03■■□□□ 1.44
CCDC113-204ENST00000566498 RASSF10A6NK89 507 aa24.02■■□□□ 1.44
CCDC113-204ENST00000566498 IL15P40933 162 aaPredicted RBP24.02■■□□□ 1.44
CCDC113-204ENST00000566498 FKBP1AP62942 108 aaKnown RBP24.02■■□□□ 1.44
CCDC113-204ENST00000566498 LPIN2Q92539 896 aa24.02■■□□□ 1.44
CCDC113-204ENST00000566498 COPRSQ9NQ92 184 aa24.02■■□□□ 1.44
CCDC113-204ENST00000566498 WNT10BO00744 389 aa24.01■■□□□ 1.43
CCDC113-204ENST00000566498 FGFR2P21802 821 aa24.01■■□□□ 1.43
CCDC113-204ENST00000566498 CHAF1AQ13111 956 aaPredicted RBP24.01■■□□□ 1.43
CCDC113-204ENST00000566498 DLGAP5Q15398 846 aa24.01■■□□□ 1.43
CCDC113-204ENST00000566498 MFSD14BQ5SR56 506 aa24.01■■□□□ 1.43
CCDC113-204ENST00000566498 TLL2Q9Y6L7 1015 aa24.01■■□□□ 1.43
CCDC113-204ENST00000566498 FAM205AQ6ZU69 1335 aa24.01■■□□□ 1.43
CCDC113-204ENST00000566498 RLBP1P12271 317 aa24■■□□□ 1.43
CCDC113-204ENST00000566498 RBM5P52756 815 aaKnown RBP eCLIP24■■□□□ 1.43
CCDC113-204ENST00000566498 GRM1Q13255 1194 aa24■■□□□ 1.43
CCDC113-204ENST00000566498 SCAF8Q9UPN6 1271 aaKnown RBP24■■□□□ 1.43
CCDC113-204ENST00000566498 ZNF646O15015 1829 aaPredicted RBP24■■□□□ 1.43
CCDC113-204ENST00000566498 MTX1Q13505 466 aa23.99■■□□□ 1.43
CCDC113-204ENST00000566498 C2orf69Q8N8R5 385 aa23.99■■□□□ 1.43
CCDC113-204ENST00000566498 MS4A1P11836 297 aa23.98■■□□□ 1.43
CCDC113-204ENST00000566498 ATP2B3Q16720 1220 aa23.98■■□□□ 1.43
CCDC113-204ENST00000566498 SAPCD2Q86UD0 394 aa23.98■■□□□ 1.43
CCDC113-204ENST00000566498 PANK1Q8TE04 598 aa23.98■■□□□ 1.43
CCDC113-204ENST00000566498 RCAN3Q9UKA8 241 aa23.98■■□□□ 1.43
CCDC113-204ENST00000566498 PITPNM2Q9BZ72 1349 aa23.98■■□□□ 1.43
CCDC113-204ENST00000566498 ECE1P42892 770 aa23.97■■□□□ 1.43
CCDC113-204ENST00000566498 CDCA5Q96FF9 252 aa23.97■■□□□ 1.43
CCDC113-204ENST00000566498 WDR33Q9C0J8 1336 aaKnown RBP23.97■■□□□ 1.43
CCDC113-204ENST00000566498 TTF2Q9UNY4 1162 aaKnown RBP23.97■■□□□ 1.43
CCDC113-204ENST00000566498 PNMA6EA0A0J9YXQ4 647 aa23.96■■□□□ 1.43
CCDC113-204ENST00000566498 ZBTB7BO15156 539 aaPredicted RBP23.96■■□□□ 1.43
CCDC113-204ENST00000566498 CFAP100Q494V2 611 aa23.96■■□□□ 1.43
CCDC113-204ENST00000566498 CYP4F22Q6NT55 531 aa23.96■■□□□ 1.43
CCDC113-204ENST00000566498 CAPNS2Q96L46 248 aa23.96■■□□□ 1.43
CCDC113-204ENST00000566498 GBA2Q9HCG7 927 aaPredicted RBP23.96■■□□□ 1.43
CCDC113-204ENST00000566498 PCNTO95613 3336 aa23.95■■□□□ 1.43
CCDC113-204ENST00000566498 MYO1BO43795 1136 aa23.95■■□□□ 1.42
CCDC113-204ENST00000566498 G3BP1Q13283 466 aaKnown RBP eCLIP23.95■■□□□ 1.42
CCDC113-204ENST00000566498 TBC1D22AQ8WUA7 517 aa23.95■■□□□ 1.42
CCDC113-204ENST00000566498 C1orf115Q9H7X2 142 aa23.95■■□□□ 1.42
CCDC113-204ENST00000566498 GNL3LQ9NVN8 582 aaKnown RBP23.95■■□□□ 1.42
CCDC113-204ENST00000566498 HUNKP57058 714 aa23.94■■□□□ 1.42
CCDC113-204ENST00000566498 TIMM10P62072 90 aa23.94■■□□□ 1.42
CCDC113-204ENST00000566498 TFCP2Q12800 502 aa23.94■■□□□ 1.42
CCDC113-204ENST00000566498 PRAMEF18Q5VWM3 479 aa23.94■■□□□ 1.42
CCDC113-204ENST00000566498 MTMR14Q8NCE2 650 aa23.94■■□□□ 1.42
CCDC113-204ENST00000566498 ZBED3Q96IU2 234 aaPredicted RBP23.94■■□□□ 1.42
CCDC113-204ENST00000566498 PRMT6Q96LA8 375 aaPredicted RBP23.94■■□□□ 1.42
CCDC113-204ENST00000566498 AKAP2Q9Y2D5 859 aa23.94■■□□□ 1.42
CCDC113-204ENST00000566498 PCDHAC2Q9Y5I4 1007 aa23.94■■□□□ 1.42
CCDC113-204ENST00000566498 HSPA1AP0DMV8 641 aaKnown RBP23.93■■□□□ 1.42
CCDC113-204ENST00000566498 HSPA1BP0DMV9 641 aaKnown RBP23.93■■□□□ 1.42
CCDC113-204ENST00000566498 ATP8B2P98198 1209 aa23.93■■□□□ 1.42
CCDC113-204ENST00000566498 APOBEC3FQ8IUX4 373 aaKnown RBP23.93■■□□□ 1.42
CCDC113-204ENST00000566498 HHIPL1Q96JK4 782 aa23.92■■□□□ 1.42
CCDC113-204ENST00000566498 CLRN2A0PK11 232 aa23.91■■□□□ 1.42
CCDC113-204ENST00000566498 SPDYE2BA6NHP3 402 aa23.91■■□□□ 1.42
CCDC113-204ENST00000566498 SPDYE6P0CI01 402 aa23.91■■□□□ 1.42
CCDC113-204ENST00000566498 NEUROD6Q96NK8 337 aa23.91■■□□□ 1.42
CCDC113-204ENST00000566498 SERPINA10Q9UK55 444 aa23.91■■□□□ 1.42
CCDC113-204ENST00000566498 OS9Q13438 667 aaPredicted RBP23.9■■□□□ 1.42
CCDC113-204ENST00000566498 GRIK5Q16478 980 aa23.9■■□□□ 1.42
CCDC113-204ENST00000566498 WDR66Q8TBY9 1149 aa23.9■■□□□ 1.42
CCDC113-204ENST00000566498 VEZTQ9HBM0 779 aa23.9■■□□□ 1.42
CCDC113-204ENST00000566498 A0A1B0GUL7 405 aa23.89■■□□□ 1.41
CCDC113-204ENST00000566498 ADORA1P30542 326 aa23.89■■□□□ 1.41
CCDC113-204ENST00000566498 NF2P35240 595 aa23.89■■□□□ 1.41
CCDC113-204ENST00000566498 TTLL12Q14166 644 aaPredicted RBP23.89■■□□□ 1.41
CCDC113-204ENST00000566498 AOC2O75106 756 aa23.88■■□□□ 1.41
CCDC113-204ENST00000566498 SURF6O75683 361 aaKnown RBP23.88■■□□□ 1.41
CCDC113-204ENST00000566498 PHKA1P46020 1223 aa23.88■■□□□ 1.41
CCDC113-204ENST00000566498 CRKP46108 304 aa23.88■■□□□ 1.41
CCDC113-204ENST00000566498 POLA2Q14181 598 aa23.88■■□□□ 1.41
CCDC113-204ENST00000566498 GORABQ5T7V8 394 aa23.88■■□□□ 1.41
CCDC113-204ENST00000566498 SSH3Q8TE77 659 aa23.88■■□□□ 1.41
CCDC113-204ENST00000566498 AIDAQ96BJ3 306 aa23.88■■□□□ 1.41
CCDC113-204ENST00000566498 DEFB129Q9H1M3 183 aa23.88■■□□□ 1.41
CCDC113-204ENST00000566498 ZNF157P51786 506 aaPredicted RBP23.87■■□□□ 1.41
CCDC113-204ENST00000566498 MAP2K1Q02750 393 aaPredicted RBP23.87■■□□□ 1.41
CCDC113-204ENST00000566498 CCDC102BQ68D86 513 aa23.87■■□□□ 1.41
CCDC113-204ENST00000566498 RGMBQ6NW40 437 aa23.87■■□□□ 1.41
CCDC113-204ENST00000566498 XAGE2Q96GT9 111 aa23.87■■□□□ 1.41
CCDC113-204ENST00000566498 YTHDC1Q96MU7 727 aaKnown RBP23.87■■□□□ 1.41
CCDC113-204ENST00000566498 TDRD3Q9H7E2 651 aaKnown RBP23.87■■□□□ 1.41
CCDC113-204ENST00000566498 DENND2AQ9ULE3 1009 aa23.87■■□□□ 1.41
CCDC113-204ENST00000566498 COG6Q9Y2V7 657 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms