RNA–Protein interactions for RNA: ENST00000566104.1

TRADD-204, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 669 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-204ENST00000566104 METTL24Q5JXM2 366 aa24.98■■□□□ 1.59
TRADD-204ENST00000566104 RGMBQ6NW40 437 aa24.98■■□□□ 1.59
TRADD-204ENST00000566104 COL1A1P02452 1464 aaPredicted RBP24.97■■□□□ 1.59
TRADD-204ENST00000566104 SASH1O94885 1247 aa24.97■■□□□ 1.59
TRADD-204ENST00000566104 HIBADHP31937 336 aaKnown RBP24.97■■□□□ 1.59
TRADD-204ENST00000566104 APOBEC3FQ8IUX4 373 aaKnown RBP24.97■■□□□ 1.59
TRADD-204ENST00000566104 CA12O43570 354 aa24.96■■□□□ 1.59
TRADD-204ENST00000566104 NF2P35240 595 aa24.96■■□□□ 1.59
TRADD-204ENST00000566104 ARHGAP45Q92619 1136 aa24.96■■□□□ 1.59
TRADD-204ENST00000566104 CCDC102AQ96A19 550 aa24.96■■□□□ 1.59
TRADD-204ENST00000566104 FAM205AQ6ZU69 1335 aa24.95■■□□□ 1.58
TRADD-204ENST00000566104 HSPA8P11142 646 aaKnown RBP24.95■■□□□ 1.58
TRADD-204ENST00000566104 LBX1P52954 281 aa24.95■■□□□ 1.58
TRADD-204ENST00000566104 DLGAP5Q15398 846 aa24.95■■□□□ 1.58
TRADD-204ENST00000566104 LRRC24Q50LG9 513 aa24.95■■□□□ 1.58
TRADD-204ENST00000566104 VPS37DQ86XT2 251 aa24.95■■□□□ 1.58
TRADD-204ENST00000566104 CERS5Q8N5B7 392 aa24.95■■□□□ 1.58
TRADD-204ENST00000566104 TDRD7Q8NHU6 1098 aaKnown RBP24.95■■□□□ 1.58
TRADD-204ENST00000566104 AKAP11Q9UKA4 1901 aa24.94■■□□□ 1.58
TRADD-204ENST00000566104 PDE8BO95263 885 aa24.94■■□□□ 1.58
TRADD-204ENST00000566104 GYG1P46976 350 aa24.94■■□□□ 1.58
TRADD-204ENST00000566104 ZNF157P51786 506 aaPredicted RBP24.94■■□□□ 1.58
TRADD-204ENST00000566104 CAVIN4Q5BKX8 364 aa24.94■■□□□ 1.58
TRADD-204ENST00000566104 MIER1Q8N108 512 aa24.94■■□□□ 1.58
TRADD-204ENST00000566104 MTMR14Q8NCE2 650 aa24.94■■□□□ 1.58
TRADD-204ENST00000566104 FAM84BQ96KN1 310 aaPredicted RBP24.94■■□□□ 1.58
TRADD-204ENST00000566104 MYO1BO43795 1136 aa24.93■■□□□ 1.58
TRADD-204ENST00000566104 VGLL2Q8N8G2 317 aa24.93■■□□□ 1.58
TRADD-204ENST00000566104 ZBED3Q96IU2 234 aaPredicted RBP24.93■■□□□ 1.58
TRADD-204ENST00000566104 IPO8O15397 1037 aaKnown RBP24.92■■□□□ 1.58
TRADD-204ENST00000566104 KLHDC4Q8TBB5 520 aa24.92■■□□□ 1.58
TRADD-204ENST00000566104 F8W031 263 aaPredicted RBP24.91■■□□□ 1.58
TRADD-204ENST00000566104 HNRNPUQ00839 825 aaKnown RBP eCLIP24.91■■□□□ 1.58
TRADD-204ENST00000566104 PUM3Q15397 648 aaKnown RBP24.91■■□□□ 1.58
TRADD-204ENST00000566104 MFSD14BQ5SR56 506 aa24.91■■□□□ 1.58
TRADD-204ENST00000566104 FBXO3Q9UK99 471 aa24.91■■□□□ 1.58
TRADD-204ENST00000566104 JAG2Q9Y219 1238 aa24.91■■□□□ 1.58
TRADD-204ENST00000566104 FAM155AB1AL88 458 aaPredicted RBP24.9■■□□□ 1.58
TRADD-204ENST00000566104 EYA2O00167 538 aa24.9■■□□□ 1.58
TRADD-204ENST00000566104 SLC10A3P09131 477 aa24.9■■□□□ 1.58
TRADD-204ENST00000566104 SCAF8Q9UPN6 1271 aaKnown RBP24.9■■□□□ 1.58
TRADD-204ENST00000566104 FRAT2O75474 233 aaPredicted RBP24.89■■□□□ 1.58
TRADD-204ENST00000566104 IFIT1P09914 478 aaKnown RBP24.89■■□□□ 1.58
TRADD-204ENST00000566104 RFX5P48382 616 aaPredicted RBP24.89■■□□□ 1.58
TRADD-204ENST00000566104 CFAP100Q494V2 611 aa24.89■■□□□ 1.58
TRADD-204ENST00000566104 PPP2R3BQ9Y5P8 575 aa24.89■■□□□ 1.58
TRADD-204ENST00000566104 SPDYE2BA6NHP3 402 aa24.88■■□□□ 1.57
TRADD-204ENST00000566104 SPDYE6P0CI01 402 aa24.88■■□□□ 1.57
TRADD-204ENST00000566104 PTPN12Q05209 780 aaKnown RBP24.88■■□□□ 1.57
TRADD-204ENST00000566104 TTLL12Q14166 644 aaPredicted RBP24.88■■□□□ 1.57
TRADD-204ENST00000566104 INTS3Q68E01 1043 aaKnown RBP24.88■■□□□ 1.57
TRADD-204ENST00000566104 FBXO33Q7Z6M2 555 aa24.88■■□□□ 1.57
TRADD-204ENST00000566104 TBC1D22AQ8WUA7 517 aa24.88■■□□□ 1.57
TRADD-204ENST00000566104 GNAI3P08754 354 aa24.87■■□□□ 1.57
TRADD-204ENST00000566104 SLC5A1P13866 664 aa24.87■■□□□ 1.57
TRADD-204ENST00000566104 RBM5P52756 815 aaKnown RBP eCLIP24.87■■□□□ 1.57
TRADD-204ENST00000566104 PRAMEF18Q5VWM3 479 aa24.87■■□□□ 1.57
TRADD-204ENST00000566104 SERPINA10Q9UK55 444 aa24.87■■□□□ 1.57
TRADD-204ENST00000566104 LRRFIP2Q9Y608 721 aaKnown RBP24.87■■□□□ 1.57
TRADD-204ENST00000566104 CIAO1O76071 339 aa24.86■■□□□ 1.57
TRADD-204ENST00000566104 RASAL3Q86YV0 1011 aa24.86■■□□□ 1.57
TRADD-204ENST00000566104 REM2Q8IYK8 340 aaPredicted RBP24.86■■□□□ 1.57
TRADD-204ENST00000566104 MEIS3Q99687 375 aa24.86■■□□□ 1.57
TRADD-204ENST00000566104 TTF2Q9UNY4 1162 aaKnown RBP24.86■■□□□ 1.57
TRADD-204ENST00000566104 FGFR2P21802 821 aa24.85■■□□□ 1.57
TRADD-204ENST00000566104 ATF7IPQ6VMQ6 1270 aa24.85■■□□□ 1.57
TRADD-204ENST00000566104 ARMC9Q7Z3E5 817 aa24.85■■□□□ 1.57
TRADD-204ENST00000566104 LPIN2Q92539 896 aa24.85■■□□□ 1.57
TRADD-204ENST00000566104 DEFB129Q9H1M3 183 aa24.85■■□□□ 1.57
TRADD-204ENST00000566104 KIF23Q02241 960 aaPredicted RBP24.84■■□□□ 1.57
TRADD-204ENST00000566104 FRAT1Q92837 279 aaPredicted RBP24.84■■□□□ 1.57
TRADD-204ENST00000566104 SIL1Q9H173 461 aa24.84■■□□□ 1.57
TRADD-204ENST00000566104 IQSEC3Q9UPP2 1182 aaPredicted RBP24.84■■□□□ 1.57
TRADD-204ENST00000566104 TRIM27P14373 513 aa24.83■■□□□ 1.57
TRADD-204ENST00000566104 CHAF1AQ13111 956 aaPredicted RBP24.83■■□□□ 1.57
TRADD-204ENST00000566104 TNFAIP1Q13829 316 aa24.83■■□□□ 1.57
TRADD-204ENST00000566104 ATG9AQ7Z3C6 839 aa24.83■■□□□ 1.57
TRADD-204ENST00000566104 PRMT6Q96LA8 375 aaPredicted RBP24.83■■□□□ 1.57
TRADD-204ENST00000566104 ZIC5Q96T25 663 aa24.83■■□□□ 1.57
TRADD-204ENST00000566104 VEZTQ9HBM0 779 aa24.83■■□□□ 1.57
TRADD-204ENST00000566104 SAGE1Q9NXZ1 904 aa24.83■■□□□ 1.57
TRADD-204ENST00000566104 CASP8AP2Q9UKL3 1982 aa24.82■■□□□ 1.56
TRADD-204ENST00000566104 CLRN2A0PK11 232 aa24.82■■□□□ 1.56
TRADD-204ENST00000566104 UBE2Q2LH0YL09 131 aa24.82■■□□□ 1.56
TRADD-204ENST00000566104 IL15P40933 162 aaPredicted RBP24.82■■□□□ 1.56
TRADD-204ENST00000566104 BCAMP50895 628 aa24.82■■□□□ 1.56
TRADD-204ENST00000566104 MOB2Q70IA6 237 aa24.82■■□□□ 1.56
TRADD-204ENST00000566104 CEP126Q9P2H0 1117 aa24.82■■□□□ 1.56
TRADD-204ENST00000566104 TSKSQ9UJT2 592 aa24.82■■□□□ 1.56
TRADD-204ENST00000566104 PCDHAC2Q9Y5I4 1007 aa24.82■■□□□ 1.56
TRADD-204ENST00000566104 MAST3O60307 1309 aa24.82■■□□□ 1.56
TRADD-204ENST00000566104 BCAR3O75815 825 aa24.81■■□□□ 1.56
TRADD-204ENST00000566104 SUGT1Q9Y2Z0 365 aa24.81■■□□□ 1.56
TRADD-204ENST00000566104 CRKP46108 304 aa24.8■■□□□ 1.56
TRADD-204ENST00000566104 HDLBPQ00341 1268 aaKnown RBP24.8■■□□□ 1.56
TRADD-204ENST00000566104 ATP2B3Q16720 1220 aa24.8■■□□□ 1.56
TRADD-204ENST00000566104 COPRSQ9NQ92 184 aa24.8■■□□□ 1.56
TRADD-204ENST00000566104 PPP1R12BO60237 982 aaPredicted RBP24.79■■□□□ 1.56
TRADD-204ENST00000566104 CAPN15O75808 1086 aa24.79■■□□□ 1.56
TRADD-204ENST00000566104 SUPT20HL1Q3ZLR7 823 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms