RNA–Protein interactions for RNA: ENST00000565931.1

RNF40-207, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-207ENST00000565931 RASGRF1Q13972 1273 aa20.4■□□□□ 0.86
RNF40-207ENST00000565931 FBXW7Q969H0 707 aa20.4■□□□□ 0.86
RNF40-207ENST00000565931 LNPKQ9C0E8 428 aa20.4■□□□□ 0.86
RNF40-207ENST00000565931 DENND2AQ9ULE3 1009 aa20.4■□□□□ 0.86
RNF40-207ENST00000565931 JAG2Q9Y219 1238 aa20.4■□□□□ 0.86
RNF40-207ENST00000565931 SCARF1Q14162 830 aa20.39■□□□□ 0.85
RNF40-207ENST00000565931 RSBN1LQ6PCB5 846 aaPredicted RBP20.39■□□□□ 0.85
RNF40-207ENST00000565931 CENPQQ7L2Z9 268 aaPredicted RBP20.39■□□□□ 0.85
RNF40-207ENST00000565931 OTUD7AQ8TE49 926 aaPredicted RBP20.39■□□□□ 0.85
RNF40-207ENST00000565931 MXD3Q9BW11 206 aa20.39■□□□□ 0.85
RNF40-207ENST00000565931 HMG20BQ9P0W2 317 aa20.39■□□□□ 0.85
RNF40-207ENST00000565931 ZBTB12Q9Y330 459 aaPredicted RBP20.39■□□□□ 0.85
RNF40-207ENST00000565931 MCAMP43121 646 aa20.38■□□□□ 0.85
RNF40-207ENST00000565931 FKBP1AP62942 108 aaKnown RBP20.38■□□□□ 0.85
RNF40-207ENST00000565931 GMLQ99445 158 aa20.38■□□□□ 0.85
RNF40-207ENST00000565931 COL1A1P02452 1464 aaPredicted RBP20.37■□□□□ 0.85
RNF40-207ENST00000565931 DICER1Q9UPY3 1922 aaKnown RBP20.37■□□□□ 0.85
RNF40-207ENST00000565931 PDS5AQ29RF7 1337 aaKnown RBP20.37■□□□□ 0.85
RNF40-207ENST00000565931 SALL3Q9BXA9 1300 aa20.37■□□□□ 0.85
RNF40-207ENST00000565931 ARAP2Q8WZ64 1704 aa20.37■□□□□ 0.85
RNF40-207ENST00000565931 GMPSP49915 693 aaPredicted RBP20.37■□□□□ 0.85
RNF40-207ENST00000565931 CERS5Q8N5B7 392 aa20.37■□□□□ 0.85
RNF40-207ENST00000565931 SPATA5Q8NB90 893 aa20.37■□□□□ 0.85
RNF40-207ENST00000565931 WDR66Q8TBY9 1149 aa20.37■□□□□ 0.85
RNF40-207ENST00000565931 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.37■□□□□ 0.85
RNF40-207ENST00000565931 ECHDC1Q9NTX5 307 aa20.37■□□□□ 0.85
RNF40-207ENST00000565931 ATP5JP18859 108 aa20.36■□□□□ 0.85
RNF40-207ENST00000565931 RPS12P25398 132 aaKnown RBP20.36■□□□□ 0.85
RNF40-207ENST00000565931 YY1P25490 414 aa20.36■□□□□ 0.85
RNF40-207ENST00000565931 PI16Q6UXB8 463 aa20.36■□□□□ 0.85
RNF40-207ENST00000565931 AGBL3Q8NEM8 1001 aa20.36■□□□□ 0.85
RNF40-207ENST00000565931 TBC1D22AQ8WUA7 517 aa20.36■□□□□ 0.85
RNF40-207ENST00000565931 DPF2Q92785 391 aa20.36■□□□□ 0.85
RNF40-207ENST00000565931 L3MBTL3Q96JM7 780 aaPredicted RBP20.36■□□□□ 0.85
RNF40-207ENST00000565931 CCDC88AQ3V6T2 1871 aa20.36■□□□□ 0.85
RNF40-207ENST00000565931 TIAM2Q8IVF5 1701 aa20.36■□□□□ 0.85
RNF40-207ENST00000565931 MYO3BQ8WXR4 1341 aa20.35■□□□□ 0.85
RNF40-207ENST00000565931 SCNN1DP51172 638 aa20.35■□□□□ 0.85
RNF40-207ENST00000565931 MFSD14BQ5SR56 506 aa20.35■□□□□ 0.85
RNF40-207ENST00000565931 SNRKQ9NRH2 765 aa20.35■□□□□ 0.85
RNF40-207ENST00000565931 SALL1Q9NSC2 1324 aa20.34■□□□□ 0.85
RNF40-207ENST00000565931 MX1P20591 662 aa20.34■□□□□ 0.85
RNF40-207ENST00000565931 ZAP70P43403 619 aa20.34■□□□□ 0.85
RNF40-207ENST00000565931 GRIK5Q16478 980 aa20.34■□□□□ 0.85
RNF40-207ENST00000565931 GPATCH3Q96I76 525 aa20.34■□□□□ 0.85
RNF40-207ENST00000565931 STAP2Q9UGK3 403 aa20.34■□□□□ 0.85
RNF40-207ENST00000565931 SCN9AQ15858 1988 aa20.34■□□□□ 0.85
RNF40-207ENST00000565931 TTC41PQ6P2S7 1318 aa20.33■□□□□ 0.85
RNF40-207ENST00000565931 POTECB2RU33 542 aa20.33■□□□□ 0.85
RNF40-207ENST00000565931 PDE4AP27815 886 aa20.33■□□□□ 0.85
RNF40-207ENST00000565931 TSHZ3Q63HK5 1081 aa20.33■□□□□ 0.85
RNF40-207ENST00000565931 ZNF526Q8TF50 670 aaPredicted RBP20.33■□□□□ 0.85
RNF40-207ENST00000565931 BOLA2Q9H3K6 86 aa20.33■□□□□ 0.85
RNF40-207ENST00000565931 GPRC5DQ9NZD1 345 aa20.33■□□□□ 0.85
RNF40-207ENST00000565931 PDE1AP54750 535 aa20.32■□□□□ 0.84
RNF40-207ENST00000565931 CNOT7Q9UIV1 285 aaKnown RBP20.32■□□□□ 0.84
RNF40-207ENST00000565931 SUGT1Q9Y2Z0 365 aa20.32■□□□□ 0.84
RNF40-207ENST00000565931 CHD4Q14839 1912 aa20.31■□□□□ 0.84
RNF40-207ENST00000565931 SHTN1A0MZ66 631 aa20.31■□□□□ 0.84
RNF40-207ENST00000565931 CYP2E1P05181 493 aaPredicted RBP20.31■□□□□ 0.84
RNF40-207ENST00000565931 USP17L8P0C7I0 530 aa20.31■□□□□ 0.84
RNF40-207ENST00000565931 ZNF280AP59817 542 aaPredicted RBP20.31■□□□□ 0.84
RNF40-207ENST00000565931 TBC1D9Q6ZT07 1266 aa20.31■□□□□ 0.84
RNF40-207ENST00000565931 KIAA0825Q8IV33 1275 aa20.31■□□□□ 0.84
RNF40-207ENST00000565931 PLEKHM2Q8IWE5 1019 aa20.31■□□□□ 0.84
RNF40-207ENST00000565931 ZGPATQ8N5A5 531 aaKnown RBP20.31■□□□□ 0.84
RNF40-207ENST00000565931 PI4K2BQ8TCG2 481 aa20.31■□□□□ 0.84
RNF40-207ENST00000565931 HAUS7Q99871 368 aa20.31■□□□□ 0.84
RNF40-207ENST00000565931 NDUFB9Q9Y6M9 179 aa20.31■□□□□ 0.84
RNF40-207ENST00000565931 F8W031 263 aaPredicted RBP20.3■□□□□ 0.84
RNF40-207ENST00000565931 LMOD1P29536 600 aaPredicted RBP20.3■□□□□ 0.84
RNF40-207ENST00000565931 EPS15P42566 896 aa20.3■□□□□ 0.84
RNF40-207ENST00000565931 MICALL2Q8IY33 904 aa20.3■□□□□ 0.84
RNF40-207ENST00000565931 RRAGCQ9HB90 399 aa20.3■□□□□ 0.84
RNF40-207ENST00000565931 NMRK2Q9NPI5 230 aa20.3■□□□□ 0.84
RNF40-207ENST00000565931 ABCF2Q9UG63 623 aa20.3■□□□□ 0.84
RNF40-207ENST00000565931 IQCA1LA6NCM1 817 aa20.29■□□□□ 0.84
RNF40-207ENST00000565931 H7C1D1 291 aa20.29■□□□□ 0.84
RNF40-207ENST00000565931 ERC2O15083 957 aa20.29■□□□□ 0.84
RNF40-207ENST00000565931 GLRX3O76003 335 aaKnown RBP20.29■□□□□ 0.84
RNF40-207ENST00000565931 VEGFAP15692 232 aaPredicted RBP20.29■□□□□ 0.84
RNF40-207ENST00000565931 PRDX5P30044 214 aa20.29■□□□□ 0.84
RNF40-207ENST00000565931 MMP14P50281 582 aa20.29■□□□□ 0.84
RNF40-207ENST00000565931 SPTY2D1Q68D10 685 aaPredicted RBP20.29■□□□□ 0.84
RNF40-207ENST00000565931 DNAJC2Q99543 621 aaKnown RBP20.29■□□□□ 0.84
RNF40-207ENST00000565931 OSBPL3Q9H4L5 887 aa20.29■□□□□ 0.84
RNF40-207ENST00000565931 ANTXR1Q9H6X2 564 aa20.29■□□□□ 0.84
RNF40-207ENST00000565931 PIH1D3Q9NQM4 214 aaKnown RBP20.29■□□□□ 0.84
RNF40-207ENST00000565931 HACL1Q9UJ83 578 aa20.29■□□□□ 0.84
RNF40-207ENST00000565931 TTF2Q9UNY4 1162 aaKnown RBP20.29■□□□□ 0.84
RNF40-207ENST00000565931 LDHBP07195 334 aaKnown RBP20.28■□□□□ 0.84
RNF40-207ENST00000565931 ERICH6Q7L0X2 663 aa20.28■□□□□ 0.84
RNF40-207ENST00000565931 OGFOD1Q8N543 542 aa20.28■□□□□ 0.84
RNF40-207ENST00000565931 EDC3Q96F86 508 aaKnown RBP20.28■□□□□ 0.84
RNF40-207ENST00000565931 TAF1DQ9H5J8 278 aaPredicted RBP20.28■□□□□ 0.84
RNF40-207ENST00000565931 HDAC9Q9UKV0 1011 aa20.28■□□□□ 0.84
RNF40-207ENST00000565931 AOX1Q06278 1338 aa20.27■□□□□ 0.84
RNF40-207ENST00000565931 GOLIM4O00461 696 aa20.27■□□□□ 0.84
RNF40-207ENST00000565931 GPBP1L1Q9HC44 474 aaPredicted RBP20.27■□□□□ 0.84
RNF40-207ENST00000565931 ADARB2Q9NS39 739 aaKnown RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms