RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 ZIC5Q96T25 663 aa25■■□□□ 1.59
CLN6-206ENST00000565471 CAPN15O75808 1086 aa24.99■■□□□ 1.59
CLN6-206ENST00000565471 SLC10A3P09131 477 aa24.99■■□□□ 1.59
CLN6-206ENST00000565471 APOBEC3FQ8IUX4 373 aaKnown RBP24.99■■□□□ 1.59
CLN6-206ENST00000565471 MTMR14Q8NCE2 650 aa24.99■■□□□ 1.59
CLN6-206ENST00000565471 SCAF8Q9UPN6 1271 aaKnown RBP24.98■■□□□ 1.59
CLN6-206ENST00000565471 FAM205AQ6ZU69 1335 aa24.97■■□□□ 1.59
CLN6-206ENST00000565471 DLGAP5Q15398 846 aa24.97■■□□□ 1.59
CLN6-206ENST00000565471 TDRD7Q8NHU6 1098 aaKnown RBP24.97■■□□□ 1.59
CLN6-206ENST00000565471 HIBADHP31937 336 aaKnown RBP24.96■■□□□ 1.59
CLN6-206ENST00000565471 TSKSQ9UJT2 592 aa24.96■■□□□ 1.59
CLN6-206ENST00000565471 COL1A1P02452 1464 aaPredicted RBP24.96■■□□□ 1.59
CLN6-206ENST00000565471 NF2P35240 595 aa24.95■■□□□ 1.58
CLN6-206ENST00000565471 GYG1P46976 350 aa24.95■■□□□ 1.58
CLN6-206ENST00000565471 KIF23Q02241 960 aaPredicted RBP24.95■■□□□ 1.58
CLN6-206ENST00000565471 LRRC24Q50LG9 513 aa24.95■■□□□ 1.58
CLN6-206ENST00000565471 PRAMEF18Q5VWM3 479 aa24.95■■□□□ 1.58
CLN6-206ENST00000565471 FAM84BQ96KN1 310 aaPredicted RBP24.95■■□□□ 1.58
CLN6-206ENST00000565471 ECM29Q5VYK3 1845 aa24.94■■□□□ 1.58
CLN6-206ENST00000565471 METTL24Q5JXM2 366 aa24.94■■□□□ 1.58
CLN6-206ENST00000565471 RASAL3Q86YV0 1011 aa24.94■■□□□ 1.58
CLN6-206ENST00000565471 VGLL2Q8N8G2 317 aa24.94■■□□□ 1.58
CLN6-206ENST00000565471 F8W031 263 aaPredicted RBP24.93■■□□□ 1.58
CLN6-206ENST00000565471 REM2Q8IYK8 340 aaPredicted RBP24.93■■□□□ 1.58
CLN6-206ENST00000565471 API5Q9BZZ5 524 aaKnown RBP24.93■■□□□ 1.58
CLN6-206ENST00000565471 SAGE1Q9NXZ1 904 aa24.93■■□□□ 1.58
CLN6-206ENST00000565471 NOB1Q9ULX3 412 aaKnown RBP24.93■■□□□ 1.58
CLN6-206ENST00000565471 JAG2Q9Y219 1238 aa24.93■■□□□ 1.58
CLN6-206ENST00000565471 PDE8BO95263 885 aa24.92■■□□□ 1.58
CLN6-206ENST00000565471 CFAP100Q494V2 611 aa24.92■■□□□ 1.58
CLN6-206ENST00000565471 MOB2Q70IA6 237 aa24.92■■□□□ 1.58
CLN6-206ENST00000565471 ARAP2Q8WZ64 1704 aa24.92■■□□□ 1.58
CLN6-206ENST00000565471 SPDYE2BA6NHP3 402 aa24.91■■□□□ 1.58
CLN6-206ENST00000565471 MYO1BO43795 1136 aa24.91■■□□□ 1.58
CLN6-206ENST00000565471 SPDYE6P0CI01 402 aa24.91■■□□□ 1.58
CLN6-206ENST00000565471 MFSD14BQ5SR56 506 aa24.91■■□□□ 1.58
CLN6-206ENST00000565471 FBXO33Q7Z6M2 555 aa24.91■■□□□ 1.58
CLN6-206ENST00000565471 KLHDC4Q8TBB5 520 aa24.91■■□□□ 1.58
CLN6-206ENST00000565471 UBE2Q2LH0YL09 131 aa24.9■■□□□ 1.58
CLN6-206ENST00000565471 RFX5P48382 616 aaPredicted RBP24.9■■□□□ 1.58
CLN6-206ENST00000565471 TTLL12Q14166 644 aaPredicted RBP24.9■■□□□ 1.58
CLN6-206ENST00000565471 PPP2R3BQ9Y5P8 575 aa24.9■■□□□ 1.58
CLN6-206ENST00000565471 UBTFL1P0CB47 393 aaPredicted RBP24.89■■□□□ 1.58
CLN6-206ENST00000565471 RARSP54136 660 aaKnown RBP24.89■■□□□ 1.58
CLN6-206ENST00000565471 CAVIN4Q5BKX8 364 aa24.89■■□□□ 1.58
CLN6-206ENST00000565471 VPS37DQ86XT2 251 aa24.89■■□□□ 1.58
CLN6-206ENST00000565471 PRMT6Q96LA8 375 aaPredicted RBP24.89■■□□□ 1.58
CLN6-206ENST00000565471 CSRNP1Q96S65 589 aa24.89■■□□□ 1.58
CLN6-206ENST00000565471 DEFB129Q9H1M3 183 aa24.89■■□□□ 1.58
CLN6-206ENST00000565471 PCDHAC2Q9Y5I4 1007 aa24.89■■□□□ 1.58
CLN6-206ENST00000565471 KIF16BQ96L93 1317 aa24.88■■□□□ 1.57
CLN6-206ENST00000565471 EYA2O00167 538 aa24.88■■□□□ 1.57
CLN6-206ENST00000565471 ARMC9Q7Z3E5 817 aa24.88■■□□□ 1.57
CLN6-206ENST00000565471 HDAC5Q9UQL6 1122 aa24.88■■□□□ 1.57
CLN6-206ENST00000565471 AKAP11Q9UKA4 1901 aa24.88■■□□□ 1.57
CLN6-206ENST00000565471 PTPN12Q05209 780 aaKnown RBP24.87■■□□□ 1.57
CLN6-206ENST00000565471 PUM3Q15397 648 aaKnown RBP24.87■■□□□ 1.57
CLN6-206ENST00000565471 ARHGAP45Q92619 1136 aa24.87■■□□□ 1.57
CLN6-206ENST00000565471 RNF186Q9NXI6 227 aa24.87■■□□□ 1.57
CLN6-206ENST00000565471 SERPINA10Q9UK55 444 aa24.87■■□□□ 1.57
CLN6-206ENST00000565471 TTF2Q9UNY4 1162 aaKnown RBP24.87■■□□□ 1.57
CLN6-206ENST00000565471 FGFR2P21802 821 aa24.86■■□□□ 1.57
CLN6-206ENST00000565471 RBM5P52756 815 aaKnown RBP eCLIP24.86■■□□□ 1.57
CLN6-206ENST00000565471 ABHD8Q96I13 439 aa24.86■■□□□ 1.57
CLN6-206ENST00000565471 FBXO3Q9UK99 471 aa24.86■■□□□ 1.57
CLN6-206ENST00000565471 CLRN2A0PK11 232 aa24.85■■□□□ 1.57
CLN6-206ENST00000565471 IFIT1P09914 478 aaKnown RBP24.85■■□□□ 1.57
CLN6-206ENST00000565471 TBC1D22AQ8WUA7 517 aa24.85■■□□□ 1.57
CLN6-206ENST00000565471 CASP8AP2Q9UKL3 1982 aa24.85■■□□□ 1.57
CLN6-206ENST00000565471 LDLRAD1Q5T700 205 aa24.84■■□□□ 1.57
CLN6-206ENST00000565471 VEZTQ9HBM0 779 aa24.84■■□□□ 1.57
CLN6-206ENST00000565471 AOX1Q06278 1338 aa24.84■■□□□ 1.57
CLN6-206ENST00000565471 FRAT2O75474 233 aaPredicted RBP24.83■■□□□ 1.57
CLN6-206ENST00000565471 TRPA1O75762 1119 aa24.83■■□□□ 1.57
CLN6-206ENST00000565471 MAP3K11Q16584 847 aa24.83■■□□□ 1.57
CLN6-206ENST00000565471 SPDYE2Q495Y8 402 aa24.83■■□□□ 1.57
CLN6-206ENST00000565471 ATG9AQ7Z3C6 839 aa24.83■■□□□ 1.57
CLN6-206ENST00000565471 ANGEL1Q9UNK9 670 aaKnown RBP24.83■■□□□ 1.57
CLN6-206ENST00000565471 IQSEC3Q9UPP2 1182 aaPredicted RBP24.83■■□□□ 1.57
CLN6-206ENST00000565471 SSC5DA1L4H1 1573 aa24.83■■□□□ 1.57
CLN6-206ENST00000565471 CIAO1O76071 339 aa24.82■■□□□ 1.56
CLN6-206ENST00000565471 BCAMP50895 628 aa24.82■■□□□ 1.56
CLN6-206ENST00000565471 HDLBPQ00341 1268 aaKnown RBP24.82■■□□□ 1.56
CLN6-206ENST00000565471 TNFAIP1Q13829 316 aa24.82■■□□□ 1.56
CLN6-206ENST00000565471 PRKG1Q13976 671 aa24.82■■□□□ 1.56
CLN6-206ENST00000565471 SUPT20HL1Q3ZLR7 823 aa24.82■■□□□ 1.56
CLN6-206ENST00000565471 INTS3Q68E01 1043 aaKnown RBP24.82■■□□□ 1.56
CLN6-206ENST00000565471 LPIN2Q92539 896 aa24.82■■□□□ 1.56
CLN6-206ENST00000565471 LRRFIP2Q9Y608 721 aaKnown RBP24.82■■□□□ 1.56
CLN6-206ENST00000565471 PPP1R12BO60237 982 aaPredicted RBP24.81■■□□□ 1.56
CLN6-206ENST00000565471 SLC5A1P13866 664 aa24.81■■□□□ 1.56
CLN6-206ENST00000565471 CRKP46108 304 aa24.81■■□□□ 1.56
CLN6-206ENST00000565471 CHAF1AQ13111 956 aaPredicted RBP24.81■■□□□ 1.56
CLN6-206ENST00000565471 DZIP1LQ8IYY4 767 aaKnown RBP24.81■■□□□ 1.56
CLN6-206ENST00000565471 ZNF70Q9UC06 446 aaPredicted RBP24.81■■□□□ 1.56
CLN6-206ENST00000565471 UNCXA6NJT0 531 aa24.8■■□□□ 1.56
CLN6-206ENST00000565471 RASA3Q14644 834 aa24.8■■□□□ 1.56
CLN6-206ENST00000565471 MEIS3Q99687 375 aa24.8■■□□□ 1.56
CLN6-206ENST00000565471 SUGT1Q9Y2Z0 365 aa24.8■■□□□ 1.56
CLN6-206ENST00000565471 TM4SF4P48230 202 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms