RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 HTTP42858 3142 aa10.89□□□□□ -0.67
CAPN3-213ENST00000565173 UTYO14607 1347 aa10.88□□□□□ -0.67
CAPN3-213ENST00000565173 AOX1Q06278 1338 aa10.88□□□□□ -0.67
CAPN3-213ENST00000565173 FKBP1AP62942 108 aaKnown RBP10.88□□□□□ -0.67
CAPN3-213ENST00000565173 MLLT1Q03111 559 aaPredicted RBP10.88□□□□□ -0.67
CAPN3-213ENST00000565173 TTLL12Q14166 644 aaPredicted RBP10.88□□□□□ -0.67
CAPN3-213ENST00000565173 DLGAP5Q15398 846 aa10.88□□□□□ -0.67
CAPN3-213ENST00000565173 SLC4A10Q6U841 1118 aa10.88□□□□□ -0.67
CAPN3-213ENST00000565173 SUCLG2Q96I99 432 aa10.88□□□□□ -0.67
CAPN3-213ENST00000565173 PUS3Q9BZE2 481 aaKnown RBP10.88□□□□□ -0.67
CAPN3-213ENST00000565173 DEFB129Q9H1M3 183 aa10.88□□□□□ -0.67
CAPN3-213ENST00000565173 C9orf78Q9NZ63 289 aaPredicted RBP10.88□□□□□ -0.67
CAPN3-213ENST00000565173 FZD1Q9UP38 647 aa10.88□□□□□ -0.67
CAPN3-213ENST00000565173 CENPFP49454 3210 aa10.88□□□□□ -0.67
CAPN3-213ENST00000565173 SPDYE2BA6NHP3 402 aa10.87□□□□□ -0.67
CAPN3-213ENST00000565173 F8W031 263 aaPredicted RBP10.87□□□□□ -0.67
CAPN3-213ENST00000565173 PLIN1O60240 522 aa10.87□□□□□ -0.67
CAPN3-213ENST00000565173 TBC1D8O95759 1140 aa10.87□□□□□ -0.67
CAPN3-213ENST00000565173 NBPF7P0C2Y1 421 aaPredicted RBP10.87□□□□□ -0.67
CAPN3-213ENST00000565173 SPDYE6P0CI01 402 aa10.87□□□□□ -0.67
CAPN3-213ENST00000565173 NF2P35240 595 aa10.87□□□□□ -0.67
CAPN3-213ENST00000565173 PRKG1Q13976 671 aa10.87□□□□□ -0.67
CAPN3-213ENST00000565173 CFAP100Q494V2 611 aa10.87□□□□□ -0.67
CAPN3-213ENST00000565173 ZNF804AQ7Z570 1209 aa10.87□□□□□ -0.67
CAPN3-213ENST00000565173 MRPL50Q8N5N7 158 aaKnown RBP10.87□□□□□ -0.67
CAPN3-213ENST00000565173 SRCIN1Q9C0H9 1055 aa10.87□□□□□ -0.67
CAPN3-213ENST00000565173 CNNM1Q9NRU3 951 aa10.87□□□□□ -0.67
CAPN3-213ENST00000565173 JAG2Q9Y219 1238 aa10.87□□□□□ -0.67
CAPN3-213ENST00000565173 RIPOR2Q9Y4F9 1068 aa10.87□□□□□ -0.67
CAPN3-213ENST00000565173 FAM205AQ6ZU69 1335 aa10.86□□□□□ -0.67
CAPN3-213ENST00000565173 MKRN3Q13064 507 aaKnown RBP10.86□□□□□ -0.67
CAPN3-213ENST00000565173 UBE4AQ14139 1066 aa10.86□□□□□ -0.67
CAPN3-213ENST00000565173 MAP3K11Q16584 847 aa10.86□□□□□ -0.67
CAPN3-213ENST00000565173 RABL6Q3YEC7 729 aaPredicted RBP10.86□□□□□ -0.67
CAPN3-213ENST00000565173 TAF7LQ5H9L4 462 aa10.86□□□□□ -0.67
CAPN3-213ENST00000565173 ARMC9Q7Z3E5 817 aa10.86□□□□□ -0.67
CAPN3-213ENST00000565173 CTU1Q7Z7A3 348 aaKnown RBP10.86□□□□□ -0.67
CAPN3-213ENST00000565173 TDRD7Q8NHU6 1098 aaKnown RBP10.86□□□□□ -0.67
CAPN3-213ENST00000565173 FAM84BQ96KN1 310 aaPredicted RBP10.86□□□□□ -0.67
CAPN3-213ENST00000565173 R3HDMLQ9H3Y0 253 aa10.86□□□□□ -0.67
CAPN3-213ENST00000565173 ANGEL1Q9UNK9 670 aaKnown RBP10.86□□□□□ -0.67
CAPN3-213ENST00000565173 COL1A1P02452 1464 aaPredicted RBP10.86□□□□□ -0.67
CAPN3-213ENST00000565173 SSC5DA1L4H1 1573 aa10.86□□□□□ -0.67
CAPN3-213ENST00000565173 CLRN2A0PK11 232 aa10.85□□□□□ -0.67
CAPN3-213ENST00000565173 GYG1P46976 350 aa10.85□□□□□ -0.67
CAPN3-213ENST00000565173 NOM1Q5C9Z4 860 aaKnown RBP10.85□□□□□ -0.67
CAPN3-213ENST00000565173 NBPF12Q5TAG4 269 aaPredicted RBP10.85□□□□□ -0.67
CAPN3-213ENST00000565173 SPRYD7Q5W111 196 aa10.85□□□□□ -0.67
CAPN3-213ENST00000565173 ZNF296Q8WUU4 475 aaPredicted RBP10.85□□□□□ -0.67
CAPN3-213ENST00000565173 CFHR5Q9BXR6 569 aa10.85□□□□□ -0.67
CAPN3-213ENST00000565173 BICC1Q9H694 974 aaKnown RBP10.85□□□□□ -0.67
CAPN3-213ENST00000565173 GPR25O00155 361 aa10.84□□□□□ -0.67
CAPN3-213ENST00000565173 HIBADHP31937 336 aaKnown RBP10.84□□□□□ -0.67
CAPN3-213ENST00000565173 RASA3Q14644 834 aa10.84□□□□□ -0.67
CAPN3-213ENST00000565173 FBXO33Q7Z6M2 555 aa10.84□□□□□ -0.67
CAPN3-213ENST00000565173 ANKRD44Q8N8A2 993 aa10.84□□□□□ -0.67
CAPN3-213ENST00000565173 SLC10A4Q96EP9 437 aa10.84□□□□□ -0.67
CAPN3-213ENST00000565173 CLMNQ96JQ2 1002 aa10.84□□□□□ -0.67
CAPN3-213ENST00000565173 PPP2R3BQ9Y5P8 575 aa10.84□□□□□ -0.67
CAPN3-213ENST00000565173 MKI67P46013 3256 aaKnown RBP10.84□□□□□ -0.67
CAPN3-213ENST00000565173 BRCA2P51587 3418 aa10.83□□□□□ -0.68
CAPN3-213ENST00000565173 UNCXA6NJT0 531 aa10.83□□□□□ -0.68
CAPN3-213ENST00000565173 MYO1BO43795 1136 aa10.83□□□□□ -0.68
CAPN3-213ENST00000565173 USP2O75604 605 aaPredicted RBP10.83□□□□□ -0.68
CAPN3-213ENST00000565173 SREBF2Q12772 1141 aa10.83□□□□□ -0.68
CAPN3-213ENST00000565173 GRIK5Q16478 980 aa10.83□□□□□ -0.68
CAPN3-213ENST00000565173 SUPT20HL1Q3ZLR7 823 aa10.83□□□□□ -0.68
CAPN3-213ENST00000565173 LRRC24Q50LG9 513 aa10.83□□□□□ -0.68
CAPN3-213ENST00000565173 MFSD14BQ5SR56 506 aa10.83□□□□□ -0.68
CAPN3-213ENST00000565173 VGLL2Q8N8G2 317 aa10.83□□□□□ -0.68
CAPN3-213ENST00000565173 SSH1Q8WYL5 1049 aa10.83□□□□□ -0.68
CAPN3-213ENST00000565173 USP44Q9H0E7 712 aa10.83□□□□□ -0.68
CAPN3-213ENST00000565173 SERPINA10Q9UK55 444 aa10.83□□□□□ -0.68
CAPN3-213ENST00000565173 ECM29Q5VYK3 1845 aa10.83□□□□□ -0.68
CAPN3-213ENST00000565173 PTPRCP08575 1304 aa10.83□□□□□ -0.68
CAPN3-213ENST00000565173 MROH5Q6ZUA9 1318 aa10.83□□□□□ -0.68
CAPN3-213ENST00000565173 PPP1R12BO60237 982 aaPredicted RBP10.82□□□□□ -0.68
CAPN3-213ENST00000565173 GJA5P36382 358 aa10.82□□□□□ -0.68
CAPN3-213ENST00000565173 RBM5P52756 815 aaKnown RBP eCLIP10.82□□□□□ -0.68
CAPN3-213ENST00000565173 SOX10P56693 466 aa10.82□□□□□ -0.68
CAPN3-213ENST00000565173 INHBEP58166 350 aa10.82□□□□□ -0.68
CAPN3-213ENST00000565173 SLFN5Q08AF3 891 aa10.82□□□□□ -0.68
CAPN3-213ENST00000565173 PKN2Q16513 984 aaKnown RBP10.82□□□□□ -0.68
CAPN3-213ENST00000565173 SPDYE2Q495Y8 402 aa10.82□□□□□ -0.68
CAPN3-213ENST00000565173 DZIP1LQ8IYY4 767 aaKnown RBP10.82□□□□□ -0.68
CAPN3-213ENST00000565173 WNK4Q96J92 1243 aa10.82□□□□□ -0.68
CAPN3-213ENST00000565173 TEPSINQ96N21 525 aa10.82□□□□□ -0.68
CAPN3-213ENST00000565173 VEZTQ9HBM0 779 aa10.82□□□□□ -0.68
CAPN3-213ENST00000565173 ZNF70Q9UC06 446 aaPredicted RBP10.82□□□□□ -0.68
CAPN3-213ENST00000565173 TTF2Q9UNY4 1162 aaKnown RBP10.82□□□□□ -0.68
CAPN3-213ENST00000565173 HPS5Q9UPZ3 1129 aa10.82□□□□□ -0.68
CAPN3-213ENST00000565173 MANSC4A6NHS7 340 aaPredicted RBP10.81□□□□□ -0.68
CAPN3-213ENST00000565173 E9PSI1 815 aa10.81□□□□□ -0.68
CAPN3-213ENST00000565173 PDE8BO95263 885 aa10.81□□□□□ -0.68
CAPN3-213ENST00000565173 ZBTB48P10074 688 aaPredicted RBP10.81□□□□□ -0.68
CAPN3-213ENST00000565173 IFNL1Q8IU54 200 aa10.81□□□□□ -0.68
CAPN3-213ENST00000565173 CDAN1Q8IWY9 1227 aa10.81□□□□□ -0.68
CAPN3-213ENST00000565173 TRMT2AQ8IZ69 625 aaKnown RBP10.81□□□□□ -0.68
CAPN3-213ENST00000565173 KLHDC4Q8TBB5 520 aa10.81□□□□□ -0.68
CAPN3-213ENST00000565173 TDRD3Q9H7E2 651 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms